RNA–Protein interactions for RNA: ENST00000483738.1

UBIAD1-203, Transcript of UbiA prenyltransferase domain containing 1, human

TSL 3

Gene UBIAD1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBIAD1-203	ENST00000483738	USP11	P51784	963 aa		12.13	□□□□□ -0.47
UBIAD1-203	ENST00000483738	CCT2	P78371	535 aa	Known RBP	12.13	□□□□□ -0.47
UBIAD1-203	ENST00000483738	HERC4	Q5GLZ8	1057 aa	Predicted RBP	12.13	□□□□□ -0.47
UBIAD1-203	ENST00000483738	TMC7	Q7Z402	723 aa		12.13	□□□□□ -0.47
UBIAD1-203	ENST00000483738	LRRC71	Q8N4P6	559 aa		12.13	□□□□□ -0.47
UBIAD1-203	ENST00000483738	SMRP1	Q8NCR6	262 aa		12.13	□□□□□ -0.47
UBIAD1-203	ENST00000483738	RDM1	Q8NG50	284 aa		12.13	□□□□□ -0.47
UBIAD1-203	ENST00000483738	MRPS27	Q92552	414 aa	Known RBP	12.13	□□□□□ -0.47
UBIAD1-203	ENST00000483738	RIT2	Q99578	217 aa		12.13	□□□□□ -0.47
UBIAD1-203	ENST00000483738	TCF25	Q9BQ70	676 aa		12.13	□□□□□ -0.47
UBIAD1-203	ENST00000483738	GCOM2	Q9BZD3	368 aa	Predicted RBP	12.13	□□□□□ -0.47
UBIAD1-203	ENST00000483738	INO80B	Q9C086	356 aa	Predicted RBP	12.13	□□□□□ -0.47
UBIAD1-203	ENST00000483738	NGRN	Q9NPE2	291 aa	Known RBP	12.13	□□□□□ -0.47
UBIAD1-203	ENST00000483738	LZTS1	Q9Y250	596 aa		12.13	□□□□□ -0.47
UBIAD1-203	ENST00000483738	USP15	Q9Y4E8	981 aa	Predicted RBP	12.13	□□□□□ -0.47
UBIAD1-203	ENST00000483738	SNX14	Q9Y5W7	946 aa		12.13	□□□□□ -0.47
UBIAD1-203	ENST00000483738	NID2	Q14112	1375 aa		12.12	□□□□□ -0.47
UBIAD1-203	ENST00000483738	SPDYE4	A6NLX3	237 aa		12.12	□□□□□ -0.47
UBIAD1-203	ENST00000483738	PER2	O15055	1255 aa		12.12	□□□□□ -0.47
UBIAD1-203	ENST00000483738	DKC1	O60832	514 aa	Known RBP eCLIP	12.12	□□□□□ -0.47
UBIAD1-203	ENST00000483738	GPR32	O75388	356 aa		12.12	□□□□□ -0.47
UBIAD1-203	ENST00000483738	SKI	P12755	728 aa		12.12	□□□□□ -0.47
UBIAD1-203	ENST00000483738	IFNAR1	P17181	557 aa		12.12	□□□□□ -0.47
UBIAD1-203	ENST00000483738	XBP1	P17861	261 aa		12.12	□□□□□ -0.47
UBIAD1-203	ENST00000483738	ATP4A	P20648	1035 aa		12.12	□□□□□ -0.47
UBIAD1-203	ENST00000483738	SFPQ	P23246	707 aa	Known RBP eCLIP	12.12	□□□□□ -0.47
UBIAD1-203	ENST00000483738	TEC	P42680	631 aa		12.12	□□□□□ -0.47
UBIAD1-203	ENST00000483738	PKN1	Q16512	942 aa		12.12	□□□□□ -0.47
UBIAD1-203	ENST00000483738	MTERF2	Q49AM1	385 aa		12.12	□□□□□ -0.47
UBIAD1-203	ENST00000483738	TPRN	Q4KMQ1	711 aa		12.12	□□□□□ -0.47
UBIAD1-203	ENST00000483738	KCNT2	Q6UVM3	1135 aa		12.12	□□□□□ -0.47
UBIAD1-203	ENST00000483738	SKAP1	Q86WV1	359 aa		12.12	□□□□□ -0.47
UBIAD1-203	ENST00000483738	CRIPAK	Q8N1N5	446 aa		12.12	□□□□□ -0.47
UBIAD1-203	ENST00000483738	CRYGN	Q8WXF5	182 aa		12.12	□□□□□ -0.47
UBIAD1-203	ENST00000483738	RSPH1	Q8WYR4	309 aa		12.12	□□□□□ -0.47
UBIAD1-203	ENST00000483738	MSLNL	Q96KJ4	702 aa		12.12	□□□□□ -0.47
UBIAD1-203	ENST00000483738	RPGRIP1	Q96KN7	1286 aa		12.12	□□□□□ -0.47
UBIAD1-203	ENST00000483738	JPH2	Q9BR39	696 aa	Predicted RBP	12.12	□□□□□ -0.47
UBIAD1-203	ENST00000483738	PHF7	Q9BWX1	381 aa	Predicted RBP	12.12	□□□□□ -0.47
UBIAD1-203	ENST00000483738	SPG21	Q9NZD8	308 aa		12.12	□□□□□ -0.47
UBIAD1-203	ENST00000483738	CYP46A1	Q9Y6A2	500 aa		12.12	□□□□□ -0.47
UBIAD1-203	ENST00000483738	ZBTB42	B2RXF5	422 aa		12.11	□□□□□ -0.47
UBIAD1-203	ENST00000483738	MSH4	O15457	936 aa		12.11	□□□□□ -0.47
UBIAD1-203	ENST00000483738	DEXI	O95424	95 aa		12.11	□□□□□ -0.47
UBIAD1-203	ENST00000483738	ALDH7A1	P49419	539 aa	Known RBP	12.11	□□□□□ -0.47
UBIAD1-203	ENST00000483738	PLCB3	Q01970	1234 aa		12.11	□□□□□ -0.47
UBIAD1-203	ENST00000483738	CAMK1	Q14012	370 aa		12.11	□□□□□ -0.47
UBIAD1-203	ENST00000483738	SMC1A	Q14683	1233 aa	Known RBP	12.11	□□□□□ -0.47
UBIAD1-203	ENST00000483738	DUSP6	Q16828	381 aa		12.11	□□□□□ -0.47
UBIAD1-203	ENST00000483738	TWF2	Q6IBS0	349 aa	Known RBP	12.11	□□□□□ -0.47
UBIAD1-203	ENST00000483738	CES5A	Q6NT32	575 aa		12.11	□□□□□ -0.47
UBIAD1-203	ENST00000483738	LLGL2	Q6P1M3	1020 aa		12.11	□□□□□ -0.47
UBIAD1-203	ENST00000483738	ECHDC2	Q86YB7	292 aa		12.11	□□□□□ -0.47
UBIAD1-203	ENST00000483738	TBCK	Q8TEA7	893 aa		12.11	□□□□□ -0.47
UBIAD1-203	ENST00000483738	EDA	Q92838	391 aa		12.11	□□□□□ -0.47
UBIAD1-203	ENST00000483738	CASP10	Q92851	521 aa		12.11	□□□□□ -0.47
UBIAD1-203	ENST00000483738	TMEM169	Q96HH4	297 aa		12.11	□□□□□ -0.47
UBIAD1-203	ENST00000483738	ZNF668	Q96K58	619 aa	Predicted RBP	12.11	□□□□□ -0.47
UBIAD1-203	ENST00000483738	PRRX2	Q99811	253 aa		12.11	□□□□□ -0.47
UBIAD1-203	ENST00000483738	SLK	Q9H2G2	1235 aa	Predicted RBP	12.11	□□□□□ -0.47
UBIAD1-203	ENST00000483738	CLEC1B	Q9P126	229 aa		12.11	□□□□□ -0.47
UBIAD1-203	ENST00000483738	PCDHA4	Q9UN74	947 aa		12.11	□□□□□ -0.47
UBIAD1-203	ENST00000483738	NR2E1	Q9Y466	385 aa		12.11	□□□□□ -0.47
UBIAD1-203	ENST00000483738	CDKL5	O76039	1030 aa		12.1	□□□□□ -0.47
UBIAD1-203	ENST00000483738	EOMES	O95936	686 aa		12.1	□□□□□ -0.47
UBIAD1-203	ENST00000483738	DARS	P14868	501 aa	Known RBP	12.1	□□□□□ -0.47
UBIAD1-203	ENST00000483738	HOXB8	P17481	243 aa	Predicted RBP	12.1	□□□□□ -0.47
UBIAD1-203	ENST00000483738	ATF7	P17544	494 aa	Predicted RBP	12.1	□□□□□ -0.47
UBIAD1-203	ENST00000483738	GPC3	P51654	580 aa		12.1	□□□□□ -0.47
UBIAD1-203	ENST00000483738	FAM189B	P81408	668 aa		12.1	□□□□□ -0.47
UBIAD1-203	ENST00000483738	RNASEL	Q05823	741 aa	Known RBP	12.1	□□□□□ -0.47
UBIAD1-203	ENST00000483738	NONO	Q15233	471 aa	Known RBP eCLIP	12.1	□□□□□ -0.47
UBIAD1-203	ENST00000483738	XKR3	Q5GH77	459 aa		12.1	□□□□□ -0.47
UBIAD1-203	ENST00000483738	GALNT17	Q6IS24	598 aa		12.1	□□□□□ -0.47
UBIAD1-203	ENST00000483738	HFE2	Q6ZVN8	426 aa		12.1	□□□□□ -0.47
UBIAD1-203	ENST00000483738	ALYREF	Q86V81	257 aa	Known RBP	12.1	□□□□□ -0.47
UBIAD1-203	ENST00000483738	EXOC8	Q8IYI6	725 aa		12.1	□□□□□ -0.47
UBIAD1-203	ENST00000483738	BLID	Q8IZY5	108 aa		12.1	□□□□□ -0.47
UBIAD1-203	ENST00000483738	FBXL16	Q8N461	479 aa		12.1	□□□□□ -0.47
UBIAD1-203	ENST00000483738	PBXIP1	Q96AQ6	731 aa		12.1	□□□□□ -0.47
UBIAD1-203	ENST00000483738	UNC45A	Q9H3U1	944 aa		12.1	□□□□□ -0.47
UBIAD1-203	ENST00000483738	NCOA5	Q9HCD5	579 aa	Known RBP	12.1	□□□□□ -0.47
UBIAD1-203	ENST00000483738	PCDHGC5	Q9Y5F6	944 aa		12.1	□□□□□ -0.47
UBIAD1-203	ENST00000483738	CCDC194	A0A1B0GVG4	234 aa		12.09	□□□□□ -0.47
UBIAD1-203	ENST00000483738	TMEM221	A6NGB7	291 aa		12.09	□□□□□ -0.47
UBIAD1-203	ENST00000483738	DDX11L8	A8MPP1	907 aa		12.09	□□□□□ -0.47
UBIAD1-203	ENST00000483738		M0R296	226 aa		12.09	□□□□□ -0.47
UBIAD1-203	ENST00000483738	GLP2R	O95838	553 aa		12.09	□□□□□ -0.47
UBIAD1-203	ENST00000483738	PDIA3	P30101	505 aa	Known RBP	12.09	□□□□□ -0.47
UBIAD1-203	ENST00000483738	ERVFC1	P60507	584 aa		12.09	□□□□□ -0.47
UBIAD1-203	ENST00000483738	DSC3	Q14574	896 aa		12.09	□□□□□ -0.47
UBIAD1-203	ENST00000483738	CBX2	Q14781	532 aa	Predicted RBP	12.09	□□□□□ -0.47
UBIAD1-203	ENST00000483738	TRIM67	Q6ZTA4	783 aa		12.09	□□□□□ -0.47
UBIAD1-203	ENST00000483738	RUFY3	Q7L099	469 aa		12.09	□□□□□ -0.47
UBIAD1-203	ENST00000483738	KRT25	Q7Z3Z0	450 aa		12.09	□□□□□ -0.47
UBIAD1-203	ENST00000483738	FAM177A1	Q8N128	213 aa	Predicted RBP	12.09	□□□□□ -0.47
UBIAD1-203	ENST00000483738	HELQ	Q8TDG4	1101 aa		12.09	□□□□□ -0.47
UBIAD1-203	ENST00000483738	SLC5A5	Q92911	643 aa		12.09	□□□□□ -0.47
UBIAD1-203	ENST00000483738	KCNB2	Q92953	911 aa		12.09	□□□□□ -0.47
UBIAD1-203	ENST00000483738	CASD1	Q96PB1	797 aa		12.09	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms