RNA–Protein interactions for RNA: ENST00000483136.1

CACNA1C-226, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-226ENST00000483136 ELF2Q15723 593 aa6.72□□□□□ -1.33
CACNA1C-226ENST00000483136 C4orf17Q53FE4 359 aa6.72□□□□□ -1.33
CACNA1C-226ENST00000483136 RCSD1Q6JBY9 416 aa6.72□□□□□ -1.33
CACNA1C-226ENST00000483136 KANK3Q6NY19 840 aa6.72□□□□□ -1.33
CACNA1C-226ENST00000483136 CCNI2Q6ZMN8 369 aaPredicted RBP6.72□□□□□ -1.33
CACNA1C-226ENST00000483136 LRRC69Q6ZNQ3 347 aa6.72□□□□□ -1.33
CACNA1C-226ENST00000483136 RAB44Q7Z6P3 723 aaPredicted RBP6.72□□□□□ -1.33
CACNA1C-226ENST00000483136 ZNF444Q8N0Y2 327 aaPredicted RBP6.72□□□□□ -1.33
CACNA1C-226ENST00000483136 VPS52Q8N1B4 723 aa6.72□□□□□ -1.33
CACNA1C-226ENST00000483136 FAM181AQ8N9Y4 354 aa6.72□□□□□ -1.33
CACNA1C-226ENST00000483136 DEFB124Q8NES8 71 aa6.72□□□□□ -1.33
CACNA1C-226ENST00000483136 DNASE1L2Q92874 299 aa6.72□□□□□ -1.33
CACNA1C-226ENST00000483136 DNAJC2Q99543 621 aaKnown RBP6.72□□□□□ -1.33
CACNA1C-226ENST00000483136 ADAMTS10Q9H324 1103 aa6.72□□□□□ -1.33
CACNA1C-226ENST00000483136 MLXIPQ9HAP2 919 aa6.72□□□□□ -1.33
CACNA1C-226ENST00000483136 LMAN1LQ9HAT1 526 aa6.72□□□□□ -1.33
CACNA1C-226ENST00000483136 JADE2Q9NQC1 790 aa6.72□□□□□ -1.33
CACNA1C-226ENST00000483136 PIH1D3Q9NQM4 214 aaKnown RBP6.72□□□□□ -1.33
CACNA1C-226ENST00000483136 SETD4Q9NVD3 440 aa6.72□□□□□ -1.33
CACNA1C-226ENST00000483136 TMEM161AQ9NX61 479 aa6.72□□□□□ -1.33
CACNA1C-226ENST00000483136 PADI3Q9ULW8 664 aa6.72□□□□□ -1.33
CACNA1C-226ENST00000483136 PA2G4Q9UQ80 394 aaKnown RBP6.72□□□□□ -1.33
CACNA1C-226ENST00000483136 CFAP46Q8IYW2 2715 aa6.72□□□□□ -1.33
CACNA1C-226ENST00000483136 TICRRQ7Z2Z1 1910 aa6.72□□□□□ -1.33
CACNA1C-226ENST00000483136 F5P12259 2224 aa6.72□□□□□ -1.33
CACNA1C-226ENST00000483136 KAT6AQ92794 2004 aa6.71□□□□□ -1.33
CACNA1C-226ENST00000483136 DENND3A2RUS2 1198 aa6.71□□□□□ -1.34
CACNA1C-226ENST00000483136 ERVH48-1M5A8F1 160 aa6.71□□□□□ -1.34
CACNA1C-226ENST00000483136 CCDC192P0DO97 292 aa6.71□□□□□ -1.34
CACNA1C-226ENST00000483136 CD52P31358 61 aa6.71□□□□□ -1.34
CACNA1C-226ENST00000483136 CLCN4P51793 760 aa6.71□□□□□ -1.34
CACNA1C-226ENST00000483136 ADAM17P78536 824 aa6.71□□□□□ -1.34
CACNA1C-226ENST00000483136 LRRC32Q14392 662 aa6.71□□□□□ -1.34
CACNA1C-226ENST00000483136 CELF3Q5SZQ8 465 aaKnown RBP6.71□□□□□ -1.34
CACNA1C-226ENST00000483136 DDX53Q86TM3 631 aaKnown RBP6.71□□□□□ -1.34
CACNA1C-226ENST00000483136 C11orf74Q86VG3 221 aa6.71□□□□□ -1.34
CACNA1C-226ENST00000483136 SLC39A11Q8N1S5 342 aa6.71□□□□□ -1.34
CACNA1C-226ENST00000483136 NME8Q8N427 588 aa6.71□□□□□ -1.34
CACNA1C-226ENST00000483136 CHCHD4Q8N4Q1 142 aa6.71□□□□□ -1.34
CACNA1C-226ENST00000483136 ZNF513Q8N8E2 541 aaPredicted RBP6.71□□□□□ -1.34
CACNA1C-226ENST00000483136 SMG7Q92540 1137 aaKnown RBP6.71□□□□□ -1.34
CACNA1C-226ENST00000483136 PHF20Q9BVI0 1012 aa6.71□□□□□ -1.34
CACNA1C-226ENST00000483136 MRPL9Q9BYD2 267 aaKnown RBP6.71□□□□□ -1.34
CACNA1C-226ENST00000483136 PLEKHA4Q9H4M7 779 aa6.71□□□□□ -1.34
CACNA1C-226ENST00000483136 RGS18Q9NS28 235 aa6.71□□□□□ -1.34
CACNA1C-226ENST00000483136 SEPT9Q9UHD8 586 aaPredicted RBP6.71□□□□□ -1.34
CACNA1C-226ENST00000483136 IL17BQ9UHF5 180 aa6.71□□□□□ -1.34
CACNA1C-226ENST00000483136 DOCK8Q8NF50 2099 aa6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 NOP56O00567 594 aaKnown RBP6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 INPPL1O15357 1258 aa6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 PAPLNO95428 1278 aa6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 GATMP50440 423 aa6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 MLLT6P55198 1093 aaPredicted RBP6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 FAM189BP81408 668 aa6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 MRPS6P82932 125 aaKnown RBP6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 FAM102BQ5T8I3 360 aa6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 ZNF574Q6ZN55 896 aaPredicted RBP6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 GPR155Q7Z3F1 870 aa6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 RASEFQ8IZ41 740 aa6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 SYNPOQ8N3V7 929 aa6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 SDR42E1Q8WUS8 393 aa6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 LINC01599Q8WXQ3 324 aa6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 ADAMTS14Q8WXS8 1223 aa6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 FAM212AQ96EL1 285 aa6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 MSANTD3Q96H12 275 aa6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 ZBP1Q9H171 429 aa6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 PRORYQ9H606 182 aa6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 AGO3Q9H9G7 860 aaKnown RBP6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 ZDHHC7Q9NXF8 308 aa6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 MTMR4Q9NYA4 1195 aa6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 ANKMY1Q9P2S6 941 aa6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 CDH7Q9ULB5 785 aa6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 PRR12Q9ULL5 1215 aa6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 CDY2AQ9Y6F7 541 aa6.7□□□□□ -1.34
CACNA1C-226ENST00000483136 DOPEY2Q9Y3R5 2298 aa6.69□□□□□ -1.34
CACNA1C-226ENST00000483136 LNP1A1A4G5 178 aa6.69□□□□□ -1.34
CACNA1C-226ENST00000483136 E9PAM4 449 aa6.69□□□□□ -1.34
CACNA1C-226ENST00000483136 NFIBO00712 420 aa6.69□□□□□ -1.34
CACNA1C-226ENST00000483136 GPR182O15218 404 aa6.69□□□□□ -1.34
CACNA1C-226ENST00000483136 SLC28A2O43868 658 aa6.69□□□□□ -1.34
CACNA1C-226ENST00000483136 LGALS2P05162 132 aa6.69□□□□□ -1.34
CACNA1C-226ENST00000483136 ADH1AP07327 375 aa6.69□□□□□ -1.34
CACNA1C-226ENST00000483136 CYP2D6P10635 497 aa6.69□□□□□ -1.34
CACNA1C-226ENST00000483136 CHRM1P11229 460 aaPredicted RBP6.69□□□□□ -1.34
CACNA1C-226ENST00000483136 DPP6P42658 865 aa6.69□□□□□ -1.34
CACNA1C-226ENST00000483136 SATB1Q01826 763 aa6.69□□□□□ -1.34
CACNA1C-226ENST00000483136 EXOSC9Q06265 439 aaKnown RBP6.69□□□□□ -1.34
CACNA1C-226ENST00000483136 NFX1Q12986 1120 aaKnown RBP6.69□□□□□ -1.34
CACNA1C-226ENST00000483136 SRSF5Q13243 272 aaKnown RBP6.69□□□□□ -1.34
CACNA1C-226ENST00000483136 KARSQ15046 597 aaKnown RBP6.69□□□□□ -1.34
CACNA1C-226ENST00000483136 UAP1L1Q3KQV9 507 aa6.69□□□□□ -1.34
CACNA1C-226ENST00000483136 HSDL1Q3SXM5 330 aa6.69□□□□□ -1.34
CACNA1C-226ENST00000483136 TAF1BQ53T94 588 aaPredicted RBP6.69□□□□□ -1.34
CACNA1C-226ENST00000483136 DGKKQ5KSL6 1271 aa6.69□□□□□ -1.34
CACNA1C-226ENST00000483136 SLC9C2Q5TAH2 1124 aa6.69□□□□□ -1.34
CACNA1C-226ENST00000483136 AGMOQ6ZNB7 445 aa6.69□□□□□ -1.34
CACNA1C-226ENST00000483136 MCF2L2Q86YR7 1114 aa6.69□□□□□ -1.34
CACNA1C-226ENST00000483136 MDM1Q8TC05 714 aa6.69□□□□□ -1.34
CACNA1C-226ENST00000483136 LMBR1Q8WVP7 490 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms