RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 C11orf84Q9BUA3 381 aaPredicted RBP26.33■■□□□ 1.81
RHBDF1-208ENST00000482904 FOXP1Q9H334 677 aaPredicted RBP26.33■■□□□ 1.81
RHBDF1-208ENST00000482904 ZSWIM4Q9H7M6 989 aa26.33■■□□□ 1.81
RHBDF1-208ENST00000482904 TTC12Q9H892 705 aaPredicted RBP26.33■■□□□ 1.81
RHBDF1-208ENST00000482904 SUCLA2Q9P2R7 463 aaPredicted RBP26.33■■□□□ 1.81
RHBDF1-208ENST00000482904 LOXHD1Q8IVV2 1947 aa26.33■■□□□ 1.81
RHBDF1-208ENST00000482904 IGKV6-21A0A0C4DH24 114 aa26.32■■□□□ 1.8
RHBDF1-208ENST00000482904 ZSCAN20P17040 1043 aaPredicted RBP26.32■■□□□ 1.8
RHBDF1-208ENST00000482904 MRPS5P82675 430 aaKnown RBP26.32■■□□□ 1.8
RHBDF1-208ENST00000482904 CDC42EP1Q00587 391 aa26.32■■□□□ 1.8
RHBDF1-208ENST00000482904 OTUD6AQ7L8S5 288 aa26.32■■□□□ 1.8
RHBDF1-208ENST00000482904 RHPN2Q8IUC4 686 aa26.32■■□□□ 1.8
RHBDF1-208ENST00000482904 TPH2Q8IWU9 490 aa26.32■■□□□ 1.8
RHBDF1-208ENST00000482904 SYMPKQ92797 1274 aaKnown RBP26.32■■□□□ 1.8
RHBDF1-208ENST00000482904 MRPL38Q96DV4 380 aaKnown RBP26.32■■□□□ 1.8
RHBDF1-208ENST00000482904 CCDC43Q96MW1 224 aaKnown RBP26.32■■□□□ 1.8
RHBDF1-208ENST00000482904 GCOM2Q9BZD3 368 aaPredicted RBP26.32■■□□□ 1.8
RHBDF1-208ENST00000482904 BMP2KQ9NSY1 1161 aaPredicted RBP26.32■■□□□ 1.8
RHBDF1-208ENST00000482904 KIF3AQ9Y496 699 aa26.32■■□□□ 1.8
RHBDF1-208ENST00000482904 PPME1Q9Y570 386 aa26.32■■□□□ 1.8
RHBDF1-208ENST00000482904 MRPL42Q9Y6G3 142 aaKnown RBP26.32■■□□□ 1.8
RHBDF1-208ENST00000482904 PRRC2BQ5JSZ5 2229 aaKnown RBP26.31■■□□□ 1.8
RHBDF1-208ENST00000482904 TTC3P53804 2025 aa26.31■■□□□ 1.8
RHBDF1-208ENST00000482904 GATMP50440 423 aa26.31■■□□□ 1.8
RHBDF1-208ENST00000482904 TIGD5Q53EQ6 642 aa26.31■■□□□ 1.8
RHBDF1-208ENST00000482904 EXOC8Q8IYI6 725 aa26.31■■□□□ 1.8
RHBDF1-208ENST00000482904 CRIPAKQ8N1N5 446 aa26.31■■□□□ 1.8
RHBDF1-208ENST00000482904 NEK9Q8TD19 979 aa26.31■■□□□ 1.8
RHBDF1-208ENST00000482904 NLRP4Q96MN2 994 aa26.31■■□□□ 1.8
RHBDF1-208ENST00000482904 EIF2AK1Q9BQI3 630 aaKnown RBP26.31■■□□□ 1.8
RHBDF1-208ENST00000482904 C9IYK1 514 aa26.3■■□□□ 1.8
RHBDF1-208ENST00000482904 RB1P06400 928 aa26.3■■□□□ 1.8
RHBDF1-208ENST00000482904 FGFR4P22455 802 aa26.3■■□□□ 1.8
RHBDF1-208ENST00000482904 BMPR1AP36894 532 aa26.3■■□□□ 1.8
RHBDF1-208ENST00000482904 RFC5P40937 340 aa26.3■■□□□ 1.8
RHBDF1-208ENST00000482904 AAK1Q2M2I8 961 aa26.3■■□□□ 1.8
RHBDF1-208ENST00000482904 XKR9Q5GH70 373 aa26.3■■□□□ 1.8
RHBDF1-208ENST00000482904 NOSTRINQ8IVI9 506 aa26.3■■□□□ 1.8
RHBDF1-208ENST00000482904 CLP1Q92989 425 aaKnown RBP26.3■■□□□ 1.8
RHBDF1-208ENST00000482904 ASB2Q96Q27 587 aa26.3■■□□□ 1.8
RHBDF1-208ENST00000482904 ATP6V0A4Q9HBG4 840 aa26.3■■□□□ 1.8
RHBDF1-208ENST00000482904 NOL7Q9UMY1 257 aaKnown RBP26.3■■□□□ 1.8
RHBDF1-208ENST00000482904 RALGAPA2Q2PPJ7 1873 aa26.3■■□□□ 1.8
RHBDF1-208ENST00000482904 SFPQP23246 707 aaKnown RBP eCLIP26.29■■□□□ 1.8
RHBDF1-208ENST00000482904 ZNF410Q86VK4 478 aa26.29■■□□□ 1.8
RHBDF1-208ENST00000482904 MTMR9Q96QG7 549 aa26.29■■□□□ 1.8
RHBDF1-208ENST00000482904 TMEM161AQ9NX61 479 aa26.29■■□□□ 1.8
RHBDF1-208ENST00000482904 COG5Q9UP83 839 aa26.29■■□□□ 1.8
RHBDF1-208ENST00000482904 NLRC5Q86WI3 1866 aa26.28■■□□□ 1.8
RHBDF1-208ENST00000482904 A0A087WZ62 844 aa26.28■■□□□ 1.8
RHBDF1-208ENST00000482904 POTEMA6NI47 508 aa26.28■■□□□ 1.8
RHBDF1-208ENST00000482904 TBKBP1A7MCY6 615 aa26.28■■□□□ 1.8
RHBDF1-208ENST00000482904 C5orf67F2Z3F1 127 aa26.28■■□□□ 1.8
RHBDF1-208ENST00000482904 CSDE1O75534 798 aaKnown RBP26.28■■□□□ 1.8
RHBDF1-208ENST00000482904 TFF2Q03403 129 aa26.28■■□□□ 1.8
RHBDF1-208ENST00000482904 DSC3Q14574 896 aa26.28■■□□□ 1.8
RHBDF1-208ENST00000482904 EMC2Q15006 297 aa26.28■■□□□ 1.8
RHBDF1-208ENST00000482904 TTC38Q5R3I4 469 aa26.28■■□□□ 1.8
RHBDF1-208ENST00000482904 SPOUT1Q5T280 376 aaKnown RBP26.28■■□□□ 1.8
RHBDF1-208ENST00000482904 ZNF579Q8NAF0 562 aaKnown RBP26.28■■□□□ 1.8
RHBDF1-208ENST00000482904 PSPC1Q8WXF1 523 aaKnown RBP26.28■■□□□ 1.8
RHBDF1-208ENST00000482904 HLA-CQ95604 372 aa26.28■■□□□ 1.8
RHBDF1-208ENST00000482904 TBC1D32Q96NH3 1257 aa26.28■■□□□ 1.8
RHBDF1-208ENST00000482904 FDXACB1Q9BRP7 624 aaPredicted RBP26.28■■□□□ 1.8
RHBDF1-208ENST00000482904 PLVAPQ9BX97 442 aa26.28■■□□□ 1.8
RHBDF1-208ENST00000482904 INO80BQ9C086 356 aaPredicted RBP26.28■■□□□ 1.8
RHBDF1-208ENST00000482904 TMEM60Q9H2L4 133 aa26.28■■□□□ 1.8
RHBDF1-208ENST00000482904 COL4A3BPQ9Y5P4 624 aa26.28■■□□□ 1.8
RHBDF1-208ENST00000482904 PRUNE2Q8WUY3 3088 aa26.28■■□□□ 1.8
RHBDF1-208ENST00000482904 SLITRK3O94933 977 aa26.27■■□□□ 1.8
RHBDF1-208ENST00000482904 CSPG5O95196 566 aa26.27■■□□□ 1.8
RHBDF1-208ENST00000482904 LINC00271P0C7V0 271 aa26.27■■□□□ 1.8
RHBDF1-208ENST00000482904 ORC2Q13416 577 aaPredicted RBP26.27■■□□□ 1.8
RHBDF1-208ENST00000482904 ZNF174Q15697 407 aa26.27■■□□□ 1.8
RHBDF1-208ENST00000482904 KSR1Q8IVT5 923 aa26.27■■□□□ 1.8
RHBDF1-208ENST00000482904 RNF169Q8NCN4 708 aa26.27■■□□□ 1.8
RHBDF1-208ENST00000482904 TMX3Q96JJ7 454 aa26.27■■□□□ 1.8
RHBDF1-208ENST00000482904 DHX33Q9H6R0 707 aaKnown RBP26.27■■□□□ 1.8
RHBDF1-208ENST00000482904 ELAC1Q9H777 363 aaKnown RBP26.27■■□□□ 1.8
RHBDF1-208ENST00000482904 TRANK1O15050 2925 aa26.26■■□□□ 1.79
RHBDF1-208ENST00000482904 GAS2O43903 313 aaKnown RBP26.26■■□□□ 1.79
RHBDF1-208ENST00000482904 OR52Z1P0C646 297 aa26.26■■□□□ 1.79
RHBDF1-208ENST00000482904 FGFR1P11362 822 aa26.26■■□□□ 1.79
RHBDF1-208ENST00000482904 FAM102BQ5T8I3 360 aa26.26■■□□□ 1.79
RHBDF1-208ENST00000482904 TCP11Q8WWU5 503 aa26.26■■□□□ 1.79
RHBDF1-208ENST00000482904 TMEM143Q96AN5 459 aa26.26■■□□□ 1.79
RHBDF1-208ENST00000482904 MTRQ99707 1265 aa26.26■■□□□ 1.79
RHBDF1-208ENST00000482904 DACT1Q9NYF0 836 aa26.26■■□□□ 1.79
RHBDF1-208ENST00000482904 ZBTB39O15060 712 aa26.25■■□□□ 1.79
RHBDF1-208ENST00000482904 HOXA2O43364 376 aa26.25■■□□□ 1.79
RHBDF1-208ENST00000482904 TRAPPC10P48553 1259 aa26.25■■□□□ 1.79
RHBDF1-208ENST00000482904 MCM2P49736 904 aa26.25■■□□□ 1.79
RHBDF1-208ENST00000482904 CATSPER4Q7RTX7 472 aa26.25■■□□□ 1.79
RHBDF1-208ENST00000482904 ABI1Q8IZP0 508 aa26.25■■□□□ 1.79
RHBDF1-208ENST00000482904 HSD17B14Q9BPX1 270 aa26.25■■□□□ 1.79
RHBDF1-208ENST00000482904 LMAN2LQ9H0V9 348 aa26.25■■□□□ 1.79
RHBDF1-208ENST00000482904 PIN4Q9Y237 131 aaKnown RBP26.25■■□□□ 1.79
RHBDF1-208ENST00000482904 GRM6O15303 877 aa26.24■■□□□ 1.79
RHBDF1-208ENST00000482904 LYPLA2O95372 231 aa26.24■■□□□ 1.79
RHBDF1-208ENST00000482904 CD2BP2O95400 341 aaKnown RBP26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms