RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 HOMER3Q9NSC5 361 aa13.46□□□□□ -0.26
CCDC78-213ENST00000482878 NAGPAQ9UK23 515 aa13.46□□□□□ -0.26
CCDC78-213ENST00000482878 BTNL10A8MVZ5 291 aa13.45□□□□□ -0.26
CCDC78-213ENST00000482878 ZBTB5O15062 677 aa13.45□□□□□ -0.26
CCDC78-213ENST00000482878 HOXD13P35453 343 aa13.45□□□□□ -0.26
CCDC78-213ENST00000482878 HSD17B3P37058 310 aa13.45□□□□□ -0.26
CCDC78-213ENST00000482878 RAB27AP51159 221 aa13.45□□□□□ -0.26
CCDC78-213ENST00000482878 PSMC6P62333 389 aa13.45□□□□□ -0.26
CCDC78-213ENST00000482878 UAP1Q16222 522 aaPredicted RBP13.45□□□□□ -0.26
CCDC78-213ENST00000482878 CNKSR2Q8WXI2 1034 aa13.45□□□□□ -0.26
CCDC78-213ENST00000482878 PAIP2Q9BPZ3 127 aaKnown RBP13.45□□□□□ -0.26
CCDC78-213ENST00000482878 TMBIM4Q9HC24 238 aa13.45□□□□□ -0.26
CCDC78-213ENST00000482878 DDX4Q9NQI0 724 aaKnown RBP13.45□□□□□ -0.26
CCDC78-213ENST00000482878 SCAF8Q9UPN6 1271 aaKnown RBP13.45□□□□□ -0.26
CCDC78-213ENST00000482878 ANKRD33BA6NCL7 494 aa13.45□□□□□ -0.26
CCDC78-213ENST00000482878 ZBTB48P10074 688 aaPredicted RBP13.45□□□□□ -0.26
CCDC78-213ENST00000482878 PON1P27169 355 aa13.45□□□□□ -0.26
CCDC78-213ENST00000482878 ALKBH5Q6P6C2 394 aaKnown RBP13.45□□□□□ -0.26
CCDC78-213ENST00000482878 KCNMB3Q9NPA1 279 aa13.45□□□□□ -0.26
CCDC78-213ENST00000482878 AJAP1Q9UKB5 411 aaPredicted RBP13.45□□□□□ -0.26
CCDC78-213ENST00000482878 H0YGN5 161 aa13.45□□□□□ -0.26
CCDC78-213ENST00000482878 MEIS1O00470 390 aa13.45□□□□□ -0.26
CCDC78-213ENST00000482878 CES2O00748 559 aa13.45□□□□□ -0.26
CCDC78-213ENST00000482878 TRAPPC3O43617 180 aa13.45□□□□□ -0.26
CCDC78-213ENST00000482878 GNAT1P11488 350 aa13.45□□□□□ -0.26
CCDC78-213ENST00000482878 MXRA7P84157 204 aa13.45□□□□□ -0.26
CCDC78-213ENST00000482878 METTL13Q8N6R0 699 aa13.45□□□□□ -0.26
CCDC78-213ENST00000482878 C1orf131Q8NDD1 294 aaKnown RBP13.45□□□□□ -0.26
CCDC78-213ENST00000482878 SELENOSQ9BQE4 189 aa13.45□□□□□ -0.26
CCDC78-213ENST00000482878 OSBPL1AQ9BXW6 950 aa13.45□□□□□ -0.26
CCDC78-213ENST00000482878 ZCWPW1Q9H0M4 648 aa13.45□□□□□ -0.26
CCDC78-213ENST00000482878 DDX47Q9H0S4 455 aaKnown RBP13.45□□□□□ -0.26
CCDC78-213ENST00000482878 DHX36Q9H2U1 1008 aaKnown RBP13.45□□□□□ -0.26
CCDC78-213ENST00000482878 PLCB1Q9NQ66 1216 aa13.45□□□□□ -0.26
CCDC78-213ENST00000482878 ARMCX3Q9UH62 379 aaPredicted RBP13.45□□□□□ -0.26
CCDC78-213ENST00000482878 GGT7Q9UJ14 662 aa13.45□□□□□ -0.26
CCDC78-213ENST00000482878 NFS1Q9Y697 457 aa13.45□□□□□ -0.26
CCDC78-213ENST00000482878 HGSO14964 777 aaPredicted RBP13.44□□□□□ -0.26
CCDC78-213ENST00000482878 SART1O43290 800 aaKnown RBP13.44□□□□□ -0.26
CCDC78-213ENST00000482878 EVI5O60447 810 aa13.44□□□□□ -0.26
CCDC78-213ENST00000482878 DNAJC8O75937 253 aaPredicted RBP13.44□□□□□ -0.26
CCDC78-213ENST00000482878 SMNDC1O75940 238 aaKnown RBP eCLIP13.44□□□□□ -0.26
CCDC78-213ENST00000482878 SNAP25P60880 206 aa13.44□□□□□ -0.26
CCDC78-213ENST00000482878 PDCD2Q16342 344 aaPredicted RBP13.44□□□□□ -0.26
CCDC78-213ENST00000482878 ACTRT1Q8TDG2 376 aa13.44□□□□□ -0.26
CCDC78-213ENST00000482878 BCAS3Q9H6U6 928 aa13.44□□□□□ -0.26
CCDC78-213ENST00000482878 APBA3O96018 575 aa13.44□□□□□ -0.26
CCDC78-213ENST00000482878 FLT3P36888 993 aa13.44□□□□□ -0.26
CCDC78-213ENST00000482878 TAF11Q15544 211 aa13.44□□□□□ -0.26
CCDC78-213ENST00000482878 EXOC3L4Q17RC7 722 aa13.44□□□□□ -0.26
CCDC78-213ENST00000482878 KRT71Q3SY84 523 aa13.44□□□□□ -0.26
CCDC78-213ENST00000482878 PPP4R3CPQ6ZMV5 832 aa13.44□□□□□ -0.26
CCDC78-213ENST00000482878 CATSPER3Q86XQ3 398 aa13.44□□□□□ -0.26
CCDC78-213ENST00000482878 SLF2Q8IX21 1173 aa13.44□□□□□ -0.26
CCDC78-213ENST00000482878 TPCN2Q8NHX9 752 aa13.44□□□□□ -0.26
CCDC78-213ENST00000482878 PBKQ96KB5 322 aa13.44□□□□□ -0.26
CCDC78-213ENST00000482878 ZNF570Q96NI8 536 aa13.44□□□□□ -0.26
CCDC78-213ENST00000482878 POLLQ9UGP5 575 aa13.44□□□□□ -0.26
CCDC78-213ENST00000482878 NOC2LQ9Y3T9 749 aaKnown RBP13.44□□□□□ -0.26
CCDC78-213ENST00000482878 CCT8L1PA6NM43 557 aa13.44□□□□□ -0.26
CCDC78-213ENST00000482878 CTNND1O60716 968 aaKnown RBP13.44□□□□□ -0.26
CCDC78-213ENST00000482878 AKAP3O75969 853 aa13.44□□□□□ -0.26
CCDC78-213ENST00000482878 AFPP02771 609 aaKnown RBP13.44□□□□□ -0.26
CCDC78-213ENST00000482878 ITGA4P13612 1032 aa13.44□□□□□ -0.26
CCDC78-213ENST00000482878 HSPA1LP34931 641 aa13.44□□□□□ -0.26
CCDC78-213ENST00000482878 CTCFP49711 727 aaPredicted RBP13.44□□□□□ -0.26
CCDC78-213ENST00000482878 MAGOHP61326 146 aaKnown RBP13.44□□□□□ -0.26
CCDC78-213ENST00000482878 PPP2R2AP63151 447 aa13.44□□□□□ -0.26
CCDC78-213ENST00000482878 GIT2Q14161 759 aa13.44□□□□□ -0.26
CCDC78-213ENST00000482878 DCAF17Q5H9S7 520 aaPredicted RBP13.44□□□□□ -0.26
CCDC78-213ENST00000482878 C10orf76Q5T2E6 689 aa13.44□□□□□ -0.26
CCDC78-213ENST00000482878 RUFY4Q6ZNE9 571 aa13.44□□□□□ -0.26
CCDC78-213ENST00000482878 CCHCR1Q8TD31 782 aa13.44□□□□□ -0.26
CCDC78-213ENST00000482878 MAGOHBQ96A72 148 aaKnown RBP13.44□□□□□ -0.26
CCDC78-213ENST00000482878 CDK5RAP2Q96SN8 1893 aa13.43□□□□□ -0.26
CCDC78-213ENST00000482878 PYGLP06737 847 aa13.43□□□□□ -0.26
CCDC78-213ENST00000482878 ATP2B4P23634 1241 aa13.43□□□□□ -0.26
CCDC78-213ENST00000482878 PAPOLAP51003 745 aaKnown RBP13.43□□□□□ -0.26
CCDC78-213ENST00000482878 PABPC4Q13310 644 aaKnown RBP eCLIP13.43□□□□□ -0.26
CCDC78-213ENST00000482878 ZYXQ15942 572 aaKnown RBP13.43□□□□□ -0.26
CCDC78-213ENST00000482878 KNOP1Q1ED39 458 aaKnown RBP13.43□□□□□ -0.26
CCDC78-213ENST00000482878 PRR5LQ6MZQ0 368 aa13.43□□□□□ -0.26
CCDC78-213ENST00000482878 FRMD5Q7Z6J6 570 aa13.43□□□□□ -0.26
CCDC78-213ENST00000482878 SFR1Q86XK3 245 aa13.43□□□□□ -0.26
CCDC78-213ENST00000482878 MDM1Q8TC05 714 aa13.43□□□□□ -0.26
CCDC78-213ENST00000482878 EBF2Q9HAK2 575 aa13.43□□□□□ -0.26
CCDC78-213ENST00000482878 PAPOLBQ9NRJ5 636 aaKnown RBP13.43□□□□□ -0.26
CCDC78-213ENST00000482878 LRRC4BQ9NT99 713 aa13.43□□□□□ -0.26
CCDC78-213ENST00000482878 TRAF3IP3Q9Y228 551 aa13.43□□□□□ -0.26
CCDC78-213ENST00000482878 ZNF844Q08AG5 666 aa13.43□□□□□ -0.26
CCDC78-213ENST00000482878 CUL1Q13616 776 aa13.43□□□□□ -0.26
CCDC78-213ENST00000482878 LAMB3Q13751 1172 aa13.43□□□□□ -0.26
CCDC78-213ENST00000482878 GJB7Q6PEY0 223 aa13.43□□□□□ -0.26
CCDC78-213ENST00000482878 PRCCQ92733 491 aaPredicted RBP13.43□□□□□ -0.26
CCDC78-213ENST00000482878 GJD4Q96KN9 370 aaPredicted RBP13.43□□□□□ -0.26
CCDC78-213ENST00000482878 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.43□□□□□ -0.26
CCDC78-213ENST00000482878 REEP2Q9BRK0 252 aa13.43□□□□□ -0.26
CCDC78-213ENST00000482878 SWAP70Q9UH65 585 aa13.43□□□□□ -0.26
CCDC78-213ENST00000482878 AMACRQ9UHK6 382 aa13.43□□□□□ -0.26
CCDC78-213ENST00000482878 BZW2Q9Y6E2 419 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms