RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 DBF4BQ8NFT6 615 aa11.17□□□□□ -0.62
SPTLC1-206ENST00000482632 NEK9Q8TD19 979 aa11.17□□□□□ -0.62
SPTLC1-206ENST00000482632 PIGOQ8TEQ8 1089 aa11.17□□□□□ -0.62
SPTLC1-206ENST00000482632 ZBED2Q9BTP6 218 aa11.17□□□□□ -0.62
SPTLC1-206ENST00000482632 IFIH1Q9BYX4 1025 aaKnown RBP11.17□□□□□ -0.62
SPTLC1-206ENST00000482632 OSBPL7Q9BZF2 842 aa11.17□□□□□ -0.62
SPTLC1-206ENST00000482632 CYP26B1Q9NR63 512 aa11.17□□□□□ -0.62
SPTLC1-206ENST00000482632 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.17□□□□□ -0.62
SPTLC1-206ENST00000482632 WRAP73Q9P2S5 460 aaPredicted RBP11.17□□□□□ -0.62
SPTLC1-206ENST00000482632 LRWD1Q9UFC0 647 aa11.17□□□□□ -0.62
SPTLC1-206ENST00000482632 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 VWA3AA6NCI4 1184 aa11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 ZBTB39O15060 712 aa11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 CXCL10P02778 98 aa11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 ATP2A2P16615 1042 aaKnown RBP11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 CD52P31358 61 aa11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 RABGGTBP53611 331 aa11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 MGAT3Q09327 533 aa11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 NFX1Q12986 1120 aaKnown RBP11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 PAK2Q13177 524 aa11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 BECN1Q14457 450 aa11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 TCTN1Q2MV58 587 aa11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 LRIT3Q3SXY7 679 aa11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 FOXD4L6Q3SYB3 417 aaPredicted RBP11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 FBXO47Q5MNV8 452 aa11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 HAUS3Q68CZ6 603 aa11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 FAM109BQ6ICB4 259 aaPredicted RBP11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 FAM173BQ6P4H8 233 aa11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 FOXD4L3Q6VB84 417 aaPredicted RBP11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 ANO5Q75V66 913 aa11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 C4orf19Q8IY42 314 aa11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 KIAA0319LQ8IZA0 1049 aa11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 MYOCDQ8IZQ8 938 aa11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 NME8Q8N427 588 aa11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 ZNF454Q8N9F8 522 aa11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 SNX29Q8TEQ0 813 aa11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 NLRP7Q8WX94 980 aa11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 SLC7A3Q8WY07 619 aa11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 FAM161BQ96MY7 647 aa11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 OSMRQ99650 979 aa11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 CELF4Q9BZC1 486 aaKnown RBP11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 MSRAQ9UJ68 235 aa11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 MYH11P35749 1972 aa11.16□□□□□ -0.62
SPTLC1-206ENST00000482632 PP2D1A8MPX8 630 aa11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 LAD1O00515 517 aa11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 USO1O60763 962 aaKnown RBP11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 MED24O75448 989 aa11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 RPS6KA5O75582 802 aa11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 BAIAP3O94812 1187 aa11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 SLITRK3O94933 977 aa11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 UPP2O95045 317 aa11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 NLRP11P59045 1033 aaKnown RBP11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 WDR5P61964 334 aaKnown RBP11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 DEFB103AP81534 67 aa11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 RESTQ13127 1097 aa11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 LPIN1Q14693 890 aa11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 GPNMBQ14956 572 aa11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 EMC2Q15006 297 aa11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 SF3A1Q15459 793 aaKnown RBP11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 PLEKHG4Q58EX7 1191 aa11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 FAM26DQ5JW98 314 aa11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 KRT79Q5XKE5 535 aa11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 TSHZ1Q6ZSZ6 1077 aa11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 MAEAQ7L5Y9 396 aa11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 TMCO2Q7Z6W1 182 aaPredicted RBP11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 RPAINQ86UA6 219 aa11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 RHPN2Q8IUC4 686 aa11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 C4orf32Q8N8J7 132 aa11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 RASSF8Q8NHQ8 419 aa11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 ZDHHC16Q969W1 377 aa11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 VWCEQ96DN2 955 aa11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 CDK5RAP3Q96JB5 506 aa11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 NLRP4Q96MN2 994 aa11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 JPH2Q9BR39 696 aaPredicted RBP11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 NIFKQ9BYG3 293 aaKnown RBP11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 TUFT1Q9NNX1 390 aa11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 SUCLA2Q9P2R7 463 aaPredicted RBP11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 MTMR6Q9Y217 621 aa11.15□□□□□ -0.62
SPTLC1-206ENST00000482632 LAMA2P24043 3122 aaKnown RBP11.15□□□□□ -0.63
SPTLC1-206ENST00000482632 MYO9BQ13459 2157 aa11.14□□□□□ -0.63
SPTLC1-206ENST00000482632 ABHD14A-ACY1A0A1B0GW23 586 aa11.14□□□□□ -0.63
SPTLC1-206ENST00000482632 ARHGEF35A5YM69 484 aa11.14□□□□□ -0.63
SPTLC1-206ENST00000482632 EFCAB14O75071 495 aa11.14□□□□□ -0.63
SPTLC1-206ENST00000482632 STBD1O95210 358 aa11.14□□□□□ -0.63
SPTLC1-206ENST00000482632 AMHP03971 560 aa11.14□□□□□ -0.63
SPTLC1-206ENST00000482632 CDC25AP30304 524 aa11.14□□□□□ -0.63
SPTLC1-206ENST00000482632 PBX2P40425 430 aa11.14□□□□□ -0.63
SPTLC1-206ENST00000482632 RFC5P40937 340 aa11.14□□□□□ -0.63
SPTLC1-206ENST00000482632 PRPHP41219 470 aa11.14□□□□□ -0.63
SPTLC1-206ENST00000482632 SMAD3P84022 425 aaKnown RBP11.14□□□□□ -0.63
SPTLC1-206ENST00000482632 ATP2C1P98194 919 aaPredicted RBP11.14□□□□□ -0.63
SPTLC1-206ENST00000482632 DRP2Q13474 957 aa11.14□□□□□ -0.63
SPTLC1-206ENST00000482632 TARBP2Q15633 366 aaKnown RBP11.14□□□□□ -0.63
SPTLC1-206ENST00000482632 ZNF697Q5TEC3 545 aa11.14□□□□□ -0.63
SPTLC1-206ENST00000482632 Q7L0L9 218 aa11.14□□□□□ -0.63
SPTLC1-206ENST00000482632 CATSPER3Q86XQ3 398 aa11.14□□□□□ -0.63
SPTLC1-206ENST00000482632 APBB2Q92870 758 aa11.14□□□□□ -0.63
SPTLC1-206ENST00000482632 TMEM143Q96AN5 459 aa11.14□□□□□ -0.63
SPTLC1-206ENST00000482632 SLC9A7Q96T83 725 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms