RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 ZSCAN22P10073 491 aaPredicted RBP11.83□□□□□ -0.52
SSBP1-210ENST00000481508 GHRP10912 638 aa11.83□□□□□ -0.52
SSBP1-210ENST00000481508 DNAJB2P25686 324 aa11.83□□□□□ -0.52
SSBP1-210ENST00000481508 YWHABP31946 246 aaKnown RBP11.83□□□□□ -0.52
SSBP1-210ENST00000481508 RFC2P35250 354 aa11.83□□□□□ -0.52
SSBP1-210ENST00000481508 CEBPZQ03701 1054 aaKnown RBP11.83□□□□□ -0.52
SSBP1-210ENST00000481508 LPIN1Q14693 890 aa11.83□□□□□ -0.52
SSBP1-210ENST00000481508 TMEM266Q2M3C6 531 aa11.83□□□□□ -0.52
SSBP1-210ENST00000481508 FOXD4L6Q3SYB3 417 aaPredicted RBP11.83□□□□□ -0.52
SSBP1-210ENST00000481508 EFCAB12Q6NXP0 572 aa11.83□□□□□ -0.52
SSBP1-210ENST00000481508 FOXD4L3Q6VB84 417 aaPredicted RBP11.83□□□□□ -0.52
SSBP1-210ENST00000481508 KCNK18Q7Z418 384 aa11.83□□□□□ -0.52
SSBP1-210ENST00000481508 METTL13Q8N6R0 699 aa11.83□□□□□ -0.52
SSBP1-210ENST00000481508 PIGOQ8TEQ8 1089 aa11.83□□□□□ -0.52
SSBP1-210ENST00000481508 TMEM40Q8WWA1 233 aa11.83□□□□□ -0.52
SSBP1-210ENST00000481508 ATXN2LQ8WWM7 1075 aaKnown RBP11.83□□□□□ -0.52
SSBP1-210ENST00000481508 HERVK_113Q902F9 699 aa11.83□□□□□ -0.52
SSBP1-210ENST00000481508 CEP170P1Q96L14 293 aa11.83□□□□□ -0.52
SSBP1-210ENST00000481508 RNPC3Q96LT9 517 aaKnown RBP11.83□□□□□ -0.52
SSBP1-210ENST00000481508 POLR3CQ9BUI4 534 aaPredicted RBP11.83□□□□□ -0.52
SSBP1-210ENST00000481508 ZSWIM4Q9H7M6 989 aa11.83□□□□□ -0.52
SSBP1-210ENST00000481508 AGO3Q9H9G7 860 aaKnown RBP11.83□□□□□ -0.52
SSBP1-210ENST00000481508 TUFT1Q9NNX1 390 aa11.83□□□□□ -0.52
SSBP1-210ENST00000481508 CYP26B1Q9NR63 512 aa11.83□□□□□ -0.52
SSBP1-210ENST00000481508 TRPV2Q9Y5S1 764 aa11.83□□□□□ -0.52
SSBP1-210ENST00000481508 MYH11P35749 1972 aa11.83□□□□□ -0.52
SSBP1-210ENST00000481508 IGKV6-21A0A0C4DH24 114 aa11.82□□□□□ -0.52
SSBP1-210ENST00000481508 LAD1O00515 517 aa11.82□□□□□ -0.52
SSBP1-210ENST00000481508 GPR32O75388 356 aa11.82□□□□□ -0.52
SSBP1-210ENST00000481508 FGBP02675 491 aa11.82□□□□□ -0.52
SSBP1-210ENST00000481508 MARCKSP29966 332 aaPredicted RBP11.82□□□□□ -0.52
SSBP1-210ENST00000481508 CCT6AP40227 531 aaKnown RBP11.82□□□□□ -0.52
SSBP1-210ENST00000481508 TBC1D8BQ0IIM8 1120 aa11.82□□□□□ -0.52
SSBP1-210ENST00000481508 XKR9Q5GH70 373 aa11.82□□□□□ -0.52
SSBP1-210ENST00000481508 FBXO47Q5MNV8 452 aa11.82□□□□□ -0.52
SSBP1-210ENST00000481508 PSRC1Q6PGN9 363 aaPredicted RBP11.82□□□□□ -0.52
SSBP1-210ENST00000481508 DTHD1Q6ZMT9 781 aa11.82□□□□□ -0.52
SSBP1-210ENST00000481508 TMCO2Q7Z6W1 182 aaPredicted RBP11.82□□□□□ -0.52
SSBP1-210ENST00000481508 DBF4BQ8NFT6 615 aa11.82□□□□□ -0.52
SSBP1-210ENST00000481508 NEK9Q8TD19 979 aa11.82□□□□□ -0.52
SSBP1-210ENST00000481508 SNX29Q8TEQ0 813 aa11.82□□□□□ -0.52
SSBP1-210ENST00000481508 LRRC15Q8TF66 581 aa11.82□□□□□ -0.52
SSBP1-210ENST00000481508 TNPO1Q92973 898 aaKnown RBP11.82□□□□□ -0.52
SSBP1-210ENST00000481508 PNMA5Q96PV4 448 aa11.82□□□□□ -0.52
SSBP1-210ENST00000481508 C1QTNF1Q9BXJ1 281 aa11.82□□□□□ -0.52
SSBP1-210ENST00000481508 ADAMTS10Q9H324 1103 aa11.82□□□□□ -0.52
SSBP1-210ENST00000481508 SUGCTQ9HAC7 445 aa11.82□□□□□ -0.52
SSBP1-210ENST00000481508 XPNPEP1Q9NQW7 623 aa11.82□□□□□ -0.52
SSBP1-210ENST00000481508 LRWD1Q9UFC0 647 aa11.82□□□□□ -0.52
SSBP1-210ENST00000481508 CEP131Q9UPN4 1083 aa11.82□□□□□ -0.52
SSBP1-210ENST00000481508 SPTBN4Q9H254 2564 aa11.82□□□□□ -0.52
SSBP1-210ENST00000481508 CFAP54Q96N23 3096 aa11.82□□□□□ -0.52
SSBP1-210ENST00000481508 COL4A6Q14031 1691 aa11.81□□□□□ -0.52
SSBP1-210ENST00000481508 USP34Q70CQ2 3546 aa11.81□□□□□ -0.52
SSBP1-210ENST00000481508 MAGEB2O15479 319 aa11.81□□□□□ -0.52
SSBP1-210ENST00000481508 MAFO75444 373 aaPredicted RBP11.81□□□□□ -0.52
SSBP1-210ENST00000481508 RPA1P27694 616 aa11.81□□□□□ -0.52
SSBP1-210ENST00000481508 RARRES1P49788 294 aa11.81□□□□□ -0.52
SSBP1-210ENST00000481508 DEFB103AP81534 67 aa11.81□□□□□ -0.52
SSBP1-210ENST00000481508 MRPS5P82675 430 aaKnown RBP11.81□□□□□ -0.52
SSBP1-210ENST00000481508 EMC2Q15006 297 aa11.81□□□□□ -0.52
SSBP1-210ENST00000481508 KIZQ2M2Z5 673 aa11.81□□□□□ -0.52
SSBP1-210ENST00000481508 PLEKHG4Q58EX7 1191 aa11.81□□□□□ -0.52
SSBP1-210ENST00000481508 ARL6IP4Q66PJ3 421 aaKnown RBP11.81□□□□□ -0.52
SSBP1-210ENST00000481508 USP49Q70CQ1 688 aa11.81□□□□□ -0.52
SSBP1-210ENST00000481508 KSR1Q8IVT5 923 aa11.81□□□□□ -0.52
SSBP1-210ENST00000481508 RPUSD2Q8IZ73 545 aaKnown RBP11.81□□□□□ -0.52
SSBP1-210ENST00000481508 LINC01599Q8WXQ3 324 aa11.81□□□□□ -0.52
SSBP1-210ENST00000481508 TMEM143Q96AN5 459 aa11.81□□□□□ -0.52
SSBP1-210ENST00000481508 PLIN2Q99541 437 aa11.81□□□□□ -0.52
SSBP1-210ENST00000481508 OSMRQ99650 979 aa11.81□□□□□ -0.52
SSBP1-210ENST00000481508 CELF4Q9BZC1 486 aaKnown RBP11.81□□□□□ -0.52
SSBP1-210ENST00000481508 PRDM12Q9H4Q4 367 aa11.81□□□□□ -0.52
SSBP1-210ENST00000481508 ZSCAN16Q9H4T2 348 aaPredicted RBP11.81□□□□□ -0.52
SSBP1-210ENST00000481508 DHX33Q9H6R0 707 aaKnown RBP11.81□□□□□ -0.52
SSBP1-210ENST00000481508 TFIP11Q9UBB9 837 aaKnown RBP11.81□□□□□ -0.52
SSBP1-210ENST00000481508 FBXO2Q9UK22 296 aaPredicted RBP11.81□□□□□ -0.52
SSBP1-210ENST00000481508 GINS2Q9Y248 185 aa11.81□□□□□ -0.52
SSBP1-210ENST00000481508 KDM3AQ9Y4C1 1321 aa11.81□□□□□ -0.52
SSBP1-210ENST00000481508 ZNF318Q5VUA4 2279 aa11.8□□□□□ -0.52
SSBP1-210ENST00000481508 ZBBXA8MT70 800 aa11.8□□□□□ -0.52
SSBP1-210ENST00000481508 E9PMD0 336 aa11.8□□□□□ -0.52
SSBP1-210ENST00000481508 DKC1O60832 514 aaKnown RBP eCLIP11.8□□□□□ -0.52
SSBP1-210ENST00000481508 BRD1O95696 1058 aa11.8□□□□□ -0.52
SSBP1-210ENST00000481508 PFKMP08237 780 aa11.8□□□□□ -0.52
SSBP1-210ENST00000481508 CD52P31358 61 aa11.8□□□□□ -0.52
SSBP1-210ENST00000481508 DDIT3P35638 169 aa11.8□□□□□ -0.52
SSBP1-210ENST00000481508 NASPP49321 788 aaPredicted RBP11.8□□□□□ -0.52
SSBP1-210ENST00000481508 TFF2Q03403 129 aa11.8□□□□□ -0.52
SSBP1-210ENST00000481508 GRB10Q13322 594 aa11.8□□□□□ -0.52
SSBP1-210ENST00000481508 ADGRE1Q14246 886 aa11.8□□□□□ -0.52
SSBP1-210ENST00000481508 PDIA5Q14554 519 aa11.8□□□□□ -0.52
SSBP1-210ENST00000481508 SPECC1Q5M775 1068 aa11.8□□□□□ -0.52
SSBP1-210ENST00000481508 CNKSR3Q6P9H4 555 aa11.8□□□□□ -0.52
SSBP1-210ENST00000481508 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.8□□□□□ -0.526e-8■■■■■ 39.5
SSBP1-210ENST00000481508 RSPH3Q86UC2 560 aa11.8□□□□□ -0.52
SSBP1-210ENST00000481508 KHSRPQ92945 711 aaKnown RBP eCLIP11.8□□□□□ -0.521e-7■■■□□ 16.4
SSBP1-210ENST00000481508 CLIC6Q96NY7 704 aa11.8□□□□□ -0.52
SSBP1-210ENST00000481508 CSRNP2Q9H175 543 aa11.8□□□□□ -0.52
SSBP1-210ENST00000481508 ZNF576Q9H609 170 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms