RNA–Protein interactions for RNA: ENST00000481323.1

SNX5-210, Transcript of sorting nexin 5, humanhuman

TSL 3 BASIC

Gene SNX5, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-210ENST00000481323 STAG3L1P0CL83 205 aa20.74■□□□□ 0.91
SNX5-210ENST00000481323 SARSP49591 514 aaKnown RBP20.74■□□□□ 0.91
SNX5-210ENST00000481323 DSC3Q14574 896 aa20.74■□□□□ 0.91
SNX5-210ENST00000481323 TTC38Q5R3I4 469 aa20.74■□□□□ 0.91
SNX5-210ENST00000481323 FAM43BQ6ZT52 329 aaPredicted RBP20.74■□□□□ 0.91
SNX5-210ENST00000481323 OTUD6AQ7L8S5 288 aa20.74■□□□□ 0.91
SNX5-210ENST00000481323 KSR1Q8IVT5 923 aa20.74■□□□□ 0.91
SNX5-210ENST00000481323 ADGRA3Q8IWK6 1321 aa20.74■□□□□ 0.91
SNX5-210ENST00000481323 REV3LO60673 3130 aa20.73■□□□□ 0.91
SNX5-210ENST00000481323 POTEMA6NI47 508 aa20.73■□□□□ 0.91
SNX5-210ENST00000481323 C9IYK1 514 aa20.73■□□□□ 0.91
SNX5-210ENST00000481323 FGFR4P22455 802 aa20.73■□□□□ 0.91
SNX5-210ENST00000481323 GATMP50440 423 aa20.73■□□□□ 0.91
SNX5-210ENST00000481323 TOB1P50616 345 aaPredicted RBP20.73■□□□□ 0.91
SNX5-210ENST00000481323 CDC42EP1Q00587 391 aa20.73■□□□□ 0.91
SNX5-210ENST00000481323 BTG3Q14201 252 aaPredicted RBP20.73■□□□□ 0.91
SNX5-210ENST00000481323 NBR1Q14596 966 aa20.73■□□□□ 0.91
SNX5-210ENST00000481323 XKR9Q5GH70 373 aa20.73■□□□□ 0.91
SNX5-210ENST00000481323 SLC24A5Q71RS6 500 aa20.73■□□□□ 0.91
SNX5-210ENST00000481323 RHPN2Q8IUC4 686 aa20.73■□□□□ 0.91
SNX5-210ENST00000481323 SLC7A3Q8WY07 619 aa20.73■□□□□ 0.91
SNX5-210ENST00000481323 SAMD11Q96NU1 681 aa20.73■□□□□ 0.91
SNX5-210ENST00000481323 JPH2Q9BR39 696 aaPredicted RBP20.73■□□□□ 0.91
SNX5-210ENST00000481323 DHX33Q9H6R0 707 aaKnown RBP20.73■□□□□ 0.91
SNX5-210ENST00000481323 C1orf112Q9NSG2 853 aa20.73■□□□□ 0.91
SNX5-210ENST00000481323 BMP2KQ9NSY1 1161 aaPredicted RBP20.73■□□□□ 0.91
SNX5-210ENST00000481323 LRFN2Q9ULH4 789 aa20.73■□□□□ 0.91
SNX5-210ENST00000481323 PCDHB7Q9Y5E2 793 aa20.73■□□□□ 0.91
SNX5-210ENST00000481323 COL4A6Q14031 1691 aa20.73■□□□□ 0.91
SNX5-210ENST00000481323 A0A087WWV3 80 aa20.72■□□□□ 0.91
SNX5-210ENST00000481323 A0A087WZ62 844 aa20.72■□□□□ 0.91
SNX5-210ENST00000481323 LYPLA2O95372 231 aa20.72■□□□□ 0.91
SNX5-210ENST00000481323 OR52Z1P0C646 297 aa20.72■□□□□ 0.91
SNX5-210ENST00000481323 GJB2P29033 226 aa20.72■□□□□ 0.91
SNX5-210ENST00000481323 TECP42680 631 aa20.72■□□□□ 0.91
SNX5-210ENST00000481323 TRAPPC10P48553 1259 aa20.72■□□□□ 0.91
SNX5-210ENST00000481323 POLGP54098 1239 aaPredicted RBP20.72■□□□□ 0.91
SNX5-210ENST00000481323 FAM189BP81408 668 aa20.72■□□□□ 0.91
SNX5-210ENST00000481323 ORC2Q13416 577 aaPredicted RBP20.72■□□□□ 0.91
SNX5-210ENST00000481323 C4orf32Q8N8J7 132 aa20.72■□□□□ 0.91
SNX5-210ENST00000481323 TMEM143Q96AN5 459 aa20.72■□□□□ 0.91
SNX5-210ENST00000481323 FDXACB1Q9BRP7 624 aaPredicted RBP20.72■□□□□ 0.91
SNX5-210ENST00000481323 GCOM2Q9BZD3 368 aaPredicted RBP20.72■□□□□ 0.91
SNX5-210ENST00000481323 LMCD1Q9NZU5 365 aa20.72■□□□□ 0.91
SNX5-210ENST00000481323 NOL7Q9UMY1 257 aaKnown RBP20.72■□□□□ 0.91
SNX5-210ENST00000481323 KIF3AQ9Y496 699 aa20.72■□□□□ 0.91
SNX5-210ENST00000481323 PPME1Q9Y570 386 aa20.72■□□□□ 0.91
SNX5-210ENST00000481323 COL4A4P53420 1690 aaPredicted RBP20.71■□□□□ 0.91
SNX5-210ENST00000481323 H3BNC9 293 aa20.71■□□□□ 0.91
SNX5-210ENST00000481323 RFC5P40937 340 aa20.71■□□□□ 0.91
SNX5-210ENST00000481323 PAN2Q504Q3 1202 aaKnown RBP20.71■□□□□ 0.91
SNX5-210ENST00000481323 EXOC8Q8IYI6 725 aa20.71■□□□□ 0.91
SNX5-210ENST00000481323 NEK9Q8TD19 979 aa20.71■□□□□ 0.91
SNX5-210ENST00000481323 CLP1Q92989 425 aaKnown RBP20.71■□□□□ 0.91
SNX5-210ENST00000481323 SPATA31C1P0DKV0 1188 aa20.7■□□□□ 0.9
SNX5-210ENST00000481323 CTNNB1P35222 781 aa20.7■□□□□ 0.9
SNX5-210ENST00000481323 BMPR1AP36894 532 aa20.7■□□□□ 0.9
SNX5-210ENST00000481323 GPM6BQ13491 265 aa20.7■□□□□ 0.9
SNX5-210ENST00000481323 EMC2Q15006 297 aa20.7■□□□□ 0.9
SNX5-210ENST00000481323 FAM102BQ5T8I3 360 aa20.7■□□□□ 0.9
SNX5-210ENST00000481323 ZNF410Q86VK4 478 aa20.7■□□□□ 0.9
SNX5-210ENST00000481323 CMTR2Q8IYT2 770 aaKnown RBP20.7■□□□□ 0.9
SNX5-210ENST00000481323 PRPF31Q8WWY3 499 aaKnown RBP20.7■□□□□ 0.9
SNX5-210ENST00000481323 NLRP4Q96MN2 994 aa20.7■□□□□ 0.9
SNX5-210ENST00000481323 ANKEF1Q9NU02 776 aa20.7■□□□□ 0.9
SNX5-210ENST00000481323 PCDHB6Q9Y5E3 794 aa20.7■□□□□ 0.9
SNX5-210ENST00000481323 MRPL42Q9Y6G3 142 aaKnown RBP20.7■□□□□ 0.9
SNX5-210ENST00000481323 ZSCAN20P17040 1043 aaPredicted RBP20.69■□□□□ 0.9
SNX5-210ENST00000481323 SKIV2LQ15477 1246 aaKnown RBP20.69■□□□□ 0.9
SNX5-210ENST00000481323 MCTP1Q6DN14 999 aa20.69■□□□□ 0.9
SNX5-210ENST00000481323 CATSPER3Q86XQ3 398 aa20.69■□□□□ 0.9
SNX5-210ENST00000481323 PIGOQ8TEQ8 1089 aa20.69■□□□□ 0.9
SNX5-210ENST00000481323 IFT122Q9HBG6 1241 aa20.69■□□□□ 0.9
SNX5-210ENST00000481323 SMC3Q9UQE7 1217 aa20.69■□□□□ 0.9
SNX5-210ENST00000481323 COL4A3BPQ9Y5P4 624 aa20.69■□□□□ 0.9
SNX5-210ENST00000481323 C5orf67F2Z3F1 127 aa20.68■□□□□ 0.9
SNX5-210ENST00000481323 MED24O75448 989 aa20.68■□□□□ 0.9
SNX5-210ENST00000481323 RB1P06400 928 aa20.68■□□□□ 0.9
SNX5-210ENST00000481323 SRGAP2CP0DJJ0 459 aa20.68■□□□□ 0.9
SNX5-210ENST00000481323 FGFR1P11362 822 aa20.68■□□□□ 0.9
SNX5-210ENST00000481323 LAMTOR4Q0VGL1 99 aa20.68■□□□□ 0.9
SNX5-210ENST00000481323 PSPC1Q8WXF1 523 aaKnown RBP20.68■□□□□ 0.9
SNX5-210ENST00000481323 ELAC1Q9H777 363 aaKnown RBP20.68■□□□□ 0.9
SNX5-210ENST00000481323 ATP6V0A4Q9HBG4 840 aa20.68■□□□□ 0.9
SNX5-210ENST00000481323 XPNPEP1Q9NQW7 623 aa20.68■□□□□ 0.9
SNX5-210ENST00000481323 RNF216Q9NWF9 866 aaPredicted RBP20.68■□□□□ 0.9
SNX5-210ENST00000481323 TMEM161AQ9NX61 479 aa20.68■□□□□ 0.9
SNX5-210ENST00000481323 THEGQ9P2T0 379 aa20.68■□□□□ 0.9
SNX5-210ENST00000481323 GTF3C3Q9Y5Q9 886 aa20.68■□□□□ 0.9
SNX5-210ENST00000481323 NLRC5Q86WI3 1866 aa20.67■□□□□ 0.9
SNX5-210ENST00000481323 TBKBP1A7MCY6 615 aa20.67■□□□□ 0.9
SNX5-210ENST00000481323 DLL1O00548 723 aa20.67■□□□□ 0.9
SNX5-210ENST00000481323 XRCC6P12956 609 aaKnown RBP eCLIP20.67■□□□□ 0.9
SNX5-210ENST00000481323 RARRES1P49788 294 aa20.67■□□□□ 0.9
SNX5-210ENST00000481323 PTGDRQ13258 359 aa20.67■□□□□ 0.9
SNX5-210ENST00000481323 FERMT3Q86UX7 667 aa20.67■□□□□ 0.9
SNX5-210ENST00000481323 ECHDC2Q86YB7 292 aa20.67■□□□□ 0.9
SNX5-210ENST00000481323 TCP11Q8WWU5 503 aa20.67■□□□□ 0.9
SNX5-210ENST00000481323 MRPL38Q96DV4 380 aaKnown RBP20.67■□□□□ 0.9
SNX5-210ENST00000481323 MTRQ99707 1265 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms