RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 GRB10Q13322 594 aa20.87■□□□□ 0.93
CCM2-214ENST00000481194 RPLP2P05387 115 aaKnown RBP20.87■□□□□ 0.93
CCM2-214ENST00000481194 ACTR2P61160 394 aa20.87■□□□□ 0.93
CCM2-214ENST00000481194 PGM5Q15124 567 aa20.87■□□□□ 0.93
CCM2-214ENST00000481194 BEST2Q8NFU1 509 aa20.86■□□□□ 0.93
CCM2-214ENST00000481194 ZNF541Q9H0D2 1346 aa20.86■□□□□ 0.93
CCM2-214ENST00000481194 Q3C1V9 767 aa20.86■□□□□ 0.93
CCM2-214ENST00000481194 CCDC91Q7Z6B0 441 aa20.86■□□□□ 0.93
CCM2-214ENST00000481194 DESI2Q9BSY9 194 aa20.86■□□□□ 0.93
CCM2-214ENST00000481194 RAB20Q9NX57 234 aa20.86■□□□□ 0.93
CCM2-214ENST00000481194 UTP11Q9Y3A2 253 aaKnown RBP20.86■□□□□ 0.93
CCM2-214ENST00000481194 NFIBO00712 420 aa20.86■□□□□ 0.93
CCM2-214ENST00000481194 CYTH3O43739 400 aa20.86■□□□□ 0.93
CCM2-214ENST00000481194 ABCB4P21439 1286 aa20.86■□□□□ 0.93
CCM2-214ENST00000481194 BTAF1O14981 1849 aa20.86■□□□□ 0.93
CCM2-214ENST00000481194 TERF1P54274 439 aa20.86■□□□□ 0.93
CCM2-214ENST00000481194 MKNK1Q9BUB5 465 aa20.86■□□□□ 0.93
CCM2-214ENST00000481194 NHEJ1Q9H9Q4 299 aaPredicted RBP20.86■□□□□ 0.93
CCM2-214ENST00000481194 ST7Q9NRC1 585 aa20.86■□□□□ 0.93
CCM2-214ENST00000481194 IGSF9BQ9UPX0 1349 aa20.86■□□□□ 0.93
CCM2-214ENST00000481194 PRKCBP05771 671 aa20.85■□□□□ 0.93
CCM2-214ENST00000481194 ZNF667Q5HYK9 610 aa20.85■□□□□ 0.93
CCM2-214ENST00000481194 KRT39Q6A163 491 aa20.85■□□□□ 0.93
CCM2-214ENST00000481194 RIOX2Q8IUF8 465 aa20.85■□□□□ 0.93
CCM2-214ENST00000481194 ASCC2Q9H1I8 757 aaPredicted RBP20.85■□□□□ 0.93
CCM2-214ENST00000481194 USTQ9Y2C2 406 aa20.85■□□□□ 0.93
CCM2-214ENST00000481194 DAPK3O43293 454 aa20.85■□□□□ 0.93
CCM2-214ENST00000481194 SUPT20HL2P0C7V6 817 aa20.85■□□□□ 0.93
CCM2-214ENST00000481194 SND1Q7KZF4 910 aaKnown RBP eCLIP20.85■□□□□ 0.93
CCM2-214ENST00000481194 FAM133AQ8N9E0 248 aa20.85■□□□□ 0.93
CCM2-214ENST00000481194 FAM213AQ9BRX8 229 aa20.85■□□□□ 0.93
CCM2-214ENST00000481194 MRPL47Q9HD33 250 aaKnown RBP20.85■□□□□ 0.93
CCM2-214ENST00000481194 AGO2Q9UKV8 859 aaKnown RBP20.85■□□□□ 0.93
CCM2-214ENST00000481194 VIRMAQ69YN4 1812 aaKnown RBP20.85■□□□□ 0.93
CCM2-214ENST00000481194 CYP11B2P19099 503 aa20.85■□□□□ 0.93
CCM2-214ENST00000481194 IFT20Q8IY31 132 aa20.85■□□□□ 0.93
CCM2-214ENST00000481194 NLGN2Q8NFZ4 835 aa20.85■□□□□ 0.93
CCM2-214ENST00000481194 DYDC1Q8WWB3 177 aa20.85■□□□□ 0.93
CCM2-214ENST00000481194 ZNF484Q5JVG2 852 aa20.85■□□□□ 0.93
CCM2-214ENST00000481194 ANKRD40Q6AI12 368 aa20.85■□□□□ 0.93
CCM2-214ENST00000481194 KIAA1524Q8TCG1 905 aa20.85■□□□□ 0.93
CCM2-214ENST00000481194 PPP1R13BQ96KQ4 1090 aa20.85■□□□□ 0.93
CCM2-214ENST00000481194 RUNDC3BQ96NL0 473 aa20.85■□□□□ 0.93
CCM2-214ENST00000481194 NRBP1Q9UHY1 535 aa20.85■□□□□ 0.93
CCM2-214ENST00000481194 DBR1Q9UK59 544 aaKnown RBP20.85■□□□□ 0.93
CCM2-214ENST00000481194 PCDHAC2Q9Y5I4 1007 aa20.85■□□□□ 0.93
CCM2-214ENST00000481194 SNHG28P0DPA3 235 aa20.84■□□□□ 0.93
CCM2-214ENST00000481194 ZNF365Q70YC5 407 aa20.84■□□□□ 0.93
CCM2-214ENST00000481194 THNSL1Q8IYQ7 743 aa20.84■□□□□ 0.93
CCM2-214ENST00000481194 GPR161Q8N6U8 529 aaKnown RBP20.84■□□□□ 0.93
CCM2-214ENST00000481194 C10orf71Q711Q0 1435 aa20.84■□□□□ 0.93
CCM2-214ENST00000481194 ATRNL1Q5VV63 1379 aa20.84■□□□□ 0.93
CCM2-214ENST00000481194 DYNC1LI2O43237 492 aaPredicted RBP20.84■□□□□ 0.93
CCM2-214ENST00000481194 RARBP10826 455 aa20.84■□□□□ 0.93
CCM2-214ENST00000481194 CYP2B6P20813 491 aa20.84■□□□□ 0.93
CCM2-214ENST00000481194 ZC3H4Q9UPT8 1303 aaKnown RBP20.84■□□□□ 0.93
CCM2-214ENST00000481194 GFPT2O94808 682 aa20.84■□□□□ 0.93
CCM2-214ENST00000481194 USP49Q70CQ1 688 aa20.84■□□□□ 0.93
CCM2-214ENST00000481194 CCDC113Q9H0I3 377 aa20.84■□□□□ 0.93
CCM2-214ENST00000481194 MORC2Q9Y6X9 1032 aaPredicted RBP20.84■□□□□ 0.93
CCM2-214ENST00000481194 MARF1Q9Y4F3 1742 aaKnown RBP20.84■□□□□ 0.93
CCM2-214ENST00000481194 C4orf19Q8IY42 314 aa20.84■□□□□ 0.93
CCM2-214ENST00000481194 SLC5A5Q92911 643 aa20.84■□□□□ 0.93
CCM2-214ENST00000481194 STIM2Q9P246 746 aa20.84■□□□□ 0.93
CCM2-214ENST00000481194 RBM43Q6ZSC3 357 aaKnown RBP20.83■□□□□ 0.93
CCM2-214ENST00000481194 DNAJC12Q9UKB3 198 aa20.83■□□□□ 0.93
CCM2-214ENST00000481194 ITIH6Q6UXX5 1313 aa20.83■□□□□ 0.93
CCM2-214ENST00000481194 KPNA6O60684 536 aa20.83■□□□□ 0.93
CCM2-214ENST00000481194 RNASELQ05823 741 aaKnown RBP20.83■□□□□ 0.93
CCM2-214ENST00000481194 KLRG1Q96E93 195 aa20.83■□□□□ 0.93
CCM2-214ENST00000481194 NPHP3-ACAD11A0A0J9YXS1 232 aa20.83■□□□□ 0.92
CCM2-214ENST00000481194 NMT1P30419 496 aaKnown RBP20.83■□□□□ 0.92
CCM2-214ENST00000481194 PPP2R5CQ13362 524 aa20.83■□□□□ 0.92
CCM2-214ENST00000481194 CCDC14Q49A88 953 aa20.83■□□□□ 0.92
CCM2-214ENST00000481194 RNF149Q8NC42 400 aa20.83■□□□□ 0.92
CCM2-214ENST00000481194 SMC1BQ8NDV3 1235 aa20.83■□□□□ 0.92
CCM2-214ENST00000481194 SOCS4Q8WXH5 440 aa20.83■□□□□ 0.92
CCM2-214ENST00000481194 VTA1Q9NP79 307 aa20.83■□□□□ 0.92
CCM2-214ENST00000481194 KBTBD4Q9NVX7 518 aa20.83■□□□□ 0.92
CCM2-214ENST00000481194 CASZ1Q86V15 1759 aa20.83■□□□□ 0.92
CCM2-214ENST00000481194 FZD9O00144 591 aa20.83■□□□□ 0.92
CCM2-214ENST00000481194 GAS8O95995 478 aa20.83■□□□□ 0.92
CCM2-214ENST00000481194 TCF7P36402 384 aaPredicted RBP20.83■□□□□ 0.92
CCM2-214ENST00000481194 TSNARE1Q96NA8 513 aa20.83■□□□□ 0.92
CCM2-214ENST00000481194 NUP98P52948 1817 aa20.82■□□□□ 0.92
CCM2-214ENST00000481194 NDUFA10O95299 355 aa20.82■□□□□ 0.92
CCM2-214ENST00000481194 EIF4A3P38919 411 aaKnown RBP20.82■□□□□ 0.92
CCM2-214ENST00000481194 ARMCX2Q7L311 632 aa20.82■□□□□ 0.92
CCM2-214ENST00000481194 GRK7Q8WTQ7 553 aa20.82■□□□□ 0.92
CCM2-214ENST00000481194 OSTNP61366 133 aa20.82■□□□□ 0.92
CCM2-214ENST00000481194 CHADLQ6NUI6 762 aa20.82■□□□□ 0.92
CCM2-214ENST00000481194 PPP1R16BQ96T49 567 aa20.82■□□□□ 0.92
CCM2-214ENST00000481194 INTS2Q9H0H0 1204 aaKnown RBP20.82■□□□□ 0.92
CCM2-214ENST00000481194 KBTBD13C9JR72 458 aa20.82■□□□□ 0.92
CCM2-214ENST00000481194 ARP10275 920 aa20.82■□□□□ 0.92
CCM2-214ENST00000481194 IQCB1Q15051 598 aa20.82■□□□□ 0.92
CCM2-214ENST00000481194 CYP26B1Q9NR63 512 aa20.82■□□□□ 0.92
CCM2-214ENST00000481194 RNF8O76064 485 aa20.82■□□□□ 0.92
CCM2-214ENST00000481194 ANXA13P27216 316 aa20.82■□□□□ 0.92
CCM2-214ENST00000481194 BFSP1Q12934 665 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms