RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 GRXCR1A8MXD5 290 aa22.65■■□□□ 1.22
CTSA-206ENST00000480961 DGAT1O75907 488 aa22.65■■□□□ 1.22
CTSA-206ENST00000480961 SRGAP2CP0DJJ0 459 aa22.65■■□□□ 1.22
CTSA-206ENST00000480961 HYIQ5T013 277 aa22.65■■□□□ 1.22
CTSA-206ENST00000480961 RASIP1Q5U651 963 aa22.65■■□□□ 1.22
CTSA-206ENST00000480961 TSHZ1Q6ZSZ6 1077 aa22.65■■□□□ 1.22
CTSA-206ENST00000480961 EXOC8Q8IYI6 725 aa22.65■■□□□ 1.22
CTSA-206ENST00000480961 RASSF8Q8NHQ8 419 aa22.65■■□□□ 1.22
CTSA-206ENST00000480961 SYMPKQ92797 1274 aaKnown RBP22.65■■□□□ 1.22
CTSA-206ENST00000480961 NLRP4Q96MN2 994 aa22.65■■□□□ 1.22
CTSA-206ENST00000480961 PADI3Q9ULW8 664 aa22.65■■□□□ 1.22
CTSA-206ENST00000480961 A0A087WZ62 844 aa22.64■■□□□ 1.21
CTSA-206ENST00000480961 A0A1W2PPC1 479 aa22.64■■□□□ 1.21
CTSA-206ENST00000480961 YEATS4O95619 227 aa22.64■■□□□ 1.21
CTSA-206ENST00000480961 EYA4O95677 639 aa22.64■■□□□ 1.21
CTSA-206ENST00000480961 SSBP05455 408 aaKnown RBP eCLIP22.64■■□□□ 1.21
CTSA-206ENST00000480961 FGFR4P22455 802 aa22.64■■□□□ 1.21
CTSA-206ENST00000480961 LAMTOR4Q0VGL1 99 aa22.64■■□□□ 1.21
CTSA-206ENST00000480961 IKBKEQ14164 716 aa22.64■■□□□ 1.21
CTSA-206ENST00000480961 TMEM119Q4V9L6 283 aa22.64■■□□□ 1.21
CTSA-206ENST00000480961 TMCO2Q7Z6W1 182 aaPredicted RBP22.64■■□□□ 1.21
CTSA-206ENST00000480961 ASAP3Q8TDY4 903 aa22.64■■□□□ 1.21
CTSA-206ENST00000480961 LRRC15Q8TF66 581 aa22.64■■□□□ 1.21
CTSA-206ENST00000480961 PSPC1Q8WXF1 523 aaKnown RBP22.64■■□□□ 1.21
CTSA-206ENST00000480961 CALML4Q96GE6 196 aa22.64■■□□□ 1.21
CTSA-206ENST00000480961 FDXACB1Q9BRP7 624 aaPredicted RBP22.64■■□□□ 1.21
CTSA-206ENST00000480961 PANK2Q9BZ23 570 aa22.64■■□□□ 1.21
CTSA-206ENST00000480961 COL4A3BPQ9Y5P4 624 aa22.64■■□□□ 1.21
CTSA-206ENST00000480961 SLC4A7Q9Y6M7 1214 aa22.64■■□□□ 1.21
CTSA-206ENST00000480961 SOX1O00570 391 aaPredicted RBP22.63■■□□□ 1.21
CTSA-206ENST00000480961 RPS6KA5O75582 802 aa22.63■■□□□ 1.21
CTSA-206ENST00000480961 PLCG1P19174 1290 aa22.63■■□□□ 1.21
CTSA-206ENST00000480961 NFX1Q12986 1120 aaKnown RBP22.63■■□□□ 1.21
CTSA-206ENST00000480961 PAK2Q13177 524 aa22.63■■□□□ 1.21
CTSA-206ENST00000480961 FAM102BQ5T8I3 360 aa22.63■■□□□ 1.21
CTSA-206ENST00000480961 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.63■■□□□ 1.212e-10■□□□□ 9.4
CTSA-206ENST00000480961 POLR3FQ9H1D9 316 aaPredicted RBP22.63■■□□□ 1.21
CTSA-206ENST00000480961 CFAP45Q9UL16 551 aa22.63■■□□□ 1.21
CTSA-206ENST00000480961 PPP6R2O75170 966 aa22.62■■□□□ 1.21
CTSA-206ENST00000480961 CYP11B2P19099 503 aa22.62■■□□□ 1.21
CTSA-206ENST00000480961 ARL2P36404 184 aa22.62■■□□□ 1.21
CTSA-206ENST00000480961 NUCB2P80303 420 aa22.62■■□□□ 1.21
CTSA-206ENST00000480961 DHX8Q14562 1220 aaKnown RBP22.62■■□□□ 1.21
CTSA-206ENST00000480961 ATL3Q6DD88 541 aa22.62■■□□□ 1.21
CTSA-206ENST00000480961 FAM228AQ86W67 206 aa22.62■■□□□ 1.21
CTSA-206ENST00000480961 TCP11Q8WWU5 503 aa22.62■■□□□ 1.21
CTSA-206ENST00000480961 NT5C3AQ9H0P0 336 aa22.62■■□□□ 1.21
CTSA-206ENST00000480961 MTIF3Q9H2K0 278 aaKnown RBP22.62■■□□□ 1.21
CTSA-206ENST00000480961 TSHZ2Q9NRE2 1034 aa22.62■■□□□ 1.21
CTSA-206ENST00000480961 RCOR1Q9UKL0 485 aa22.62■■□□□ 1.21
CTSA-206ENST00000480961 ST3GAL5Q9UNP4 418 aa22.62■■□□□ 1.21
CTSA-206ENST00000480961 MORC2Q9Y6X9 1032 aaPredicted RBP22.62■■□□□ 1.21
CTSA-206ENST00000480961 WDR81Q562E7 1941 aa22.62■■□□□ 1.21
CTSA-206ENST00000480961 ABHD14A-ACY1A0A1B0GW23 586 aa22.61■■□□□ 1.21
CTSA-206ENST00000480961 PLA2G4BP0C869 781 aa22.61■■□□□ 1.21
CTSA-206ENST00000480961 DARSP14868 501 aaKnown RBP22.61■■□□□ 1.21
CTSA-206ENST00000480961 ME1P48163 572 aa22.61■■□□□ 1.21
CTSA-206ENST00000480961 WDR5P61964 334 aaKnown RBP22.61■■□□□ 1.21
CTSA-206ENST00000480961 DEFB103AP81534 67 aa22.61■■□□□ 1.21
CTSA-206ENST00000480961 USP38Q8NB14 1042 aa22.61■■□□□ 1.21
CTSA-206ENST00000480961 RUSC1Q9BVN2 902 aa22.61■■□□□ 1.21
CTSA-206ENST00000480961 GCOM2Q9BZD3 368 aaPredicted RBP22.61■■□□□ 1.21
CTSA-206ENST00000480961 TANC1Q9C0D5 1861 aa22.61■■□□□ 1.21
CTSA-206ENST00000480961 CCSER1Q9C0I3 900 aa22.61■■□□□ 1.21
CTSA-206ENST00000480961 TMX1Q9H3N1 280 aa22.61■■□□□ 1.21
CTSA-206ENST00000480961 ERVK-5Q9HDB9 667 aa22.61■■□□□ 1.21
CTSA-206ENST00000480961 SQORQ9Y6N5 450 aa22.61■■□□□ 1.21
CTSA-206ENST00000480961 TET1Q8NFU7 2136 aa22.61■■□□□ 1.21
CTSA-206ENST00000480961 GAS2O43903 313 aaKnown RBP22.6■■□□□ 1.21
CTSA-206ENST00000480961 BAIAP3O94812 1187 aa22.6■■□□□ 1.21
CTSA-206ENST00000480961 IBSPP21815 317 aaPredicted RBP22.6■■□□□ 1.21
CTSA-206ENST00000480961 GLRA2P23416 452 aa22.6■■□□□ 1.21
CTSA-206ENST00000480961 EIF4BP23588 611 aaKnown RBP22.6■■□□□ 1.21
CTSA-206ENST00000480961 KCNJ6P48051 423 aa22.6■■□□□ 1.21
CTSA-206ENST00000480961 RAD51AP2Q09MP3 1159 aa22.6■■□□□ 1.21
CTSA-206ENST00000480961 LRIT3Q3SXY7 679 aa22.6■■□□□ 1.21
CTSA-206ENST00000480961 FAM117BQ6P1L5 589 aa22.6■■□□□ 1.21
CTSA-206ENST00000480961 RNF149Q8NC42 400 aa22.6■■□□□ 1.21
CTSA-206ENST00000480961 MCPH1Q8NEM0 835 aa22.6■■□□□ 1.21
CTSA-206ENST00000480961 KCNG4Q8TDN1 519 aa22.6■■□□□ 1.21
CTSA-206ENST00000480961 LRCH3Q96II8 777 aa22.6■■□□□ 1.21
CTSA-206ENST00000480961 PCDHA7Q9UN72 937 aa22.6■■□□□ 1.21
CTSA-206ENST00000480961 RBM19Q9Y4C8 960 aaKnown RBP22.6■■□□□ 1.21
CTSA-206ENST00000480961 NPHP3-ACAD11A0A0J9YXS1 232 aa22.59■■□□□ 1.21
CTSA-206ENST00000480961 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.59■■□□□ 1.21
CTSA-206ENST00000480961 ENPP3O14638 875 aa22.59■■□□□ 1.21
CTSA-206ENST00000480961 CUTAO60888 179 aa22.59■■□□□ 1.21
CTSA-206ENST00000480961 ATP2A2P16615 1042 aaKnown RBP22.59■■□□□ 1.21
CTSA-206ENST00000480961 RABGGTBP53611 331 aa22.59■■□□□ 1.21
CTSA-206ENST00000480961 KRT85P78386 507 aa22.59■■□□□ 1.21
CTSA-206ENST00000480961 CDC42EP1Q00587 391 aa22.59■■□□□ 1.21
CTSA-206ENST00000480961 MCM6Q14566 821 aa22.59■■□□□ 1.21
CTSA-206ENST00000480961 TPRNQ4KMQ1 711 aa22.59■■□□□ 1.21
CTSA-206ENST00000480961 AXDND1Q5T1B0 1012 aaPredicted RBP22.59■■□□□ 1.21
CTSA-206ENST00000480961 RINT1Q6NUQ1 792 aa22.59■■□□□ 1.21
CTSA-206ENST00000480961 RTN4RL1Q86UN2 441 aaPredicted RBP22.59■■□□□ 1.21
CTSA-206ENST00000480961 ZNF410Q86VK4 478 aa22.59■■□□□ 1.21
CTSA-206ENST00000480961 LEO1Q8WVC0 666 aaPredicted RBP22.59■■□□□ 1.21
CTSA-206ENST00000480961 LINC01599Q8WXQ3 324 aa22.59■■□□□ 1.21
CTSA-206ENST00000480961 APBB2Q92870 758 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms