RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 LETM2Q2VYF4 491 aa17.16■□□□□ 0.34
LIMS3-203ENST00000480744 GALNT17Q6IS24 598 aa17.16■□□□□ 0.34
LIMS3-203ENST00000480744 KRT25Q7Z3Z0 450 aa17.16■□□□□ 0.34
LIMS3-203ENST00000480744 COLGALT1Q8NBJ5 622 aa17.16■□□□□ 0.34
LIMS3-203ENST00000480744 RDM1Q8NG50 284 aa17.16■□□□□ 0.34
LIMS3-203ENST00000480744 SH2D3AQ9BRG2 576 aa17.16■□□□□ 0.34
LIMS3-203ENST00000480744 SLKQ9H2G2 1235 aaPredicted RBP17.16■□□□□ 0.34
LIMS3-203ENST00000480744 DDX25Q9UHL0 483 aaKnown RBP17.16■□□□□ 0.34
LIMS3-203ENST00000480744 CD207Q9UJ71 328 aa17.16■□□□□ 0.34
LIMS3-203ENST00000480744 CYP3A7-CYP3A51PA0A087WV96 503 aa17.15■□□□□ 0.34
LIMS3-203ENST00000480744 CCDC194A0A1B0GVG4 234 aa17.15■□□□□ 0.34
LIMS3-203ENST00000480744 MBTPS2O43462 519 aa17.15■□□□□ 0.34
LIMS3-203ENST00000480744 FGF18O76093 207 aa17.15■□□□□ 0.34
LIMS3-203ENST00000480744 CYP3A7P24462 503 aa17.15■□□□□ 0.34
LIMS3-203ENST00000480744 FAM189BP81408 668 aa17.15■□□□□ 0.34
LIMS3-203ENST00000480744 ZP2Q05996 745 aa17.15■□□□□ 0.34
LIMS3-203ENST00000480744 SCRN1Q12765 414 aa17.15■□□□□ 0.34
LIMS3-203ENST00000480744 SMAD4Q13485 552 aaKnown RBP17.15■□□□□ 0.34
LIMS3-203ENST00000480744 NPY5RQ15761 445 aa17.15■□□□□ 0.34
LIMS3-203ENST00000480744 XKR3Q5GH77 459 aa17.15■□□□□ 0.34
LIMS3-203ENST00000480744 ADHFE1Q8IWW8 467 aa17.15■□□□□ 0.34
LIMS3-203ENST00000480744 ABI1Q8IZP0 508 aa17.15■□□□□ 0.34
LIMS3-203ENST00000480744 ZNF710Q8N1W2 664 aa17.15■□□□□ 0.34
LIMS3-203ENST00000480744 ETNPPLQ8TBG4 499 aa17.15■□□□□ 0.34
LIMS3-203ENST00000480744 TMEM117Q9H0C3 514 aa17.15■□□□□ 0.34
LIMS3-203ENST00000480744 ELAC1Q9H777 363 aaKnown RBP17.15■□□□□ 0.34
LIMS3-203ENST00000480744 C11orf16Q9NQ32 467 aa17.15■□□□□ 0.34
LIMS3-203ENST00000480744 TLR9Q9NR96 1032 aa17.15■□□□□ 0.34
LIMS3-203ENST00000480744 PRKAG3Q9UGI9 489 aa17.15■□□□□ 0.34
LIMS3-203ENST00000480744 DDX11L8A8MPP1 907 aa17.14■□□□□ 0.33
LIMS3-203ENST00000480744 HOXA2O43364 376 aa17.14■□□□□ 0.33
LIMS3-203ENST00000480744 SLC37A4O43826 429 aa17.14■□□□□ 0.33
LIMS3-203ENST00000480744 GPR37L1O60883 481 aa17.14■□□□□ 0.33
LIMS3-203ENST00000480744 CSDE1O75534 798 aaKnown RBP17.14■□□□□ 0.33
LIMS3-203ENST00000480744 ALADP13716 330 aa17.14■□□□□ 0.33
LIMS3-203ENST00000480744 DARSP14868 501 aaKnown RBP17.14■□□□□ 0.33
LIMS3-203ENST00000480744 LAG3P18627 525 aa17.14■□□□□ 0.33
LIMS3-203ENST00000480744 UBE3AQ05086 875 aa17.14■□□□□ 0.33
LIMS3-203ENST00000480744 DRP2Q13474 957 aa17.14■□□□□ 0.33
LIMS3-203ENST00000480744 TARBP2Q15633 366 aaKnown RBP17.14■□□□□ 0.33
LIMS3-203ENST00000480744 SMAD2Q15796 467 aaKnown RBP17.14■□□□□ 0.33
LIMS3-203ENST00000480744 MOXD1Q6UVY6 613 aa17.14■□□□□ 0.33
LIMS3-203ENST00000480744 FAM177A1Q8N128 213 aaPredicted RBP17.14■□□□□ 0.33
LIMS3-203ENST00000480744 EFHBQ8N7U6 833 aa17.14■□□□□ 0.33
LIMS3-203ENST00000480744 MBOAT7Q96N66 472 aa17.14■□□□□ 0.33
LIMS3-203ENST00000480744 NIFKQ9BYG3 293 aaKnown RBP17.14■□□□□ 0.33
LIMS3-203ENST00000480744 CWH43Q9H720 699 aa17.14■□□□□ 0.33
LIMS3-203ENST00000480744 TLE6Q9H808 572 aa17.14■□□□□ 0.33
LIMS3-203ENST00000480744 HCN4Q9Y3Q4 1203 aa17.14■□□□□ 0.33
LIMS3-203ENST00000480744 C5orf42Q9H799 3197 aa17.13■□□□□ 0.33
LIMS3-203ENST00000480744 PER2O15055 1255 aa17.13■□□□□ 0.33
LIMS3-203ENST00000480744 XBP1P17861 261 aa17.13■□□□□ 0.33
LIMS3-203ENST00000480744 DNM2P50570 870 aa17.13■□□□□ 0.33
LIMS3-203ENST00000480744 CSPP1Q1MSJ5 1256 aa17.13■□□□□ 0.33
LIMS3-203ENST00000480744 ECHDC2Q86YB7 292 aa17.13■□□□□ 0.33
LIMS3-203ENST00000480744 CASD1Q96PB1 797 aa17.13■□□□□ 0.33
LIMS3-203ENST00000480744 PHF20Q9BVI0 1012 aa17.13■□□□□ 0.33
LIMS3-203ENST00000480744 GCOM2Q9BZD3 368 aaPredicted RBP17.13■□□□□ 0.33
LIMS3-203ENST00000480744 GJB4Q9NTQ9 266 aa17.13■□□□□ 0.33
LIMS3-203ENST00000480744 RNF19AQ9NV58 838 aa17.13■□□□□ 0.33
LIMS3-203ENST00000480744 TPCN1Q9ULQ1 816 aa17.13■□□□□ 0.33
LIMS3-203ENST00000480744 BARX2Q9UMQ3 279 aaPredicted RBP17.13■□□□□ 0.33
LIMS3-203ENST00000480744 STK36Q9NRP7 1315 aa17.13■□□□□ 0.33
LIMS3-203ENST00000480744 ARID2Q68CP9 1835 aa17.12■□□□□ 0.33
LIMS3-203ENST00000480744 DCXO43602 365 aa17.12■□□□□ 0.33
LIMS3-203ENST00000480744 MARCH6O60337 910 aa17.12■□□□□ 0.33
LIMS3-203ENST00000480744 STBD1O95210 358 aa17.12■□□□□ 0.33
LIMS3-203ENST00000480744 ERVFC1P60507 584 aa17.12■□□□□ 0.33
LIMS3-203ENST00000480744 PSMC5P62195 406 aa17.12■□□□□ 0.33
LIMS3-203ENST00000480744 PLPP4Q5VZY2 271 aa17.12■□□□□ 0.33
LIMS3-203ENST00000480744 PLA2G4FQ68DD2 849 aa17.12■□□□□ 0.33
LIMS3-203ENST00000480744 B3GNT9Q6UX72 402 aa17.12■□□□□ 0.33
LIMS3-203ENST00000480744 LRRC55Q6ZSA7 311 aa17.12■□□□□ 0.33
LIMS3-203ENST00000480744 NEK8Q86SG6 692 aa17.12■□□□□ 0.33
LIMS3-203ENST00000480744 LRRC43Q8N309 656 aa17.12■□□□□ 0.33
LIMS3-203ENST00000480744 FAM122AQ96E09 287 aa17.12■□□□□ 0.33
LIMS3-203ENST00000480744 POP1Q99575 1024 aaKnown RBP17.12■□□□□ 0.33
LIMS3-203ENST00000480744 CLEC1BQ9P126 229 aa17.12■□□□□ 0.33
LIMS3-203ENST00000480744 A0A087WZ62 844 aa17.11■□□□□ 0.33
LIMS3-203ENST00000480744 C19orf67A6NJJ6 358 aa17.11■□□□□ 0.33
LIMS3-203ENST00000480744 EML1O00423 815 aa17.11■□□□□ 0.33
LIMS3-203ENST00000480744 CCNT1O60563 726 aaKnown RBP17.11■□□□□ 0.33
LIMS3-203ENST00000480744 PFKFB2O60825 505 aa17.11■□□□□ 0.33
LIMS3-203ENST00000480744 GLP2RO95838 553 aa17.11■□□□□ 0.33
LIMS3-203ENST00000480744 PBX3P40426 434 aa17.11■□□□□ 0.33
LIMS3-203ENST00000480744 KCNT2Q6UVM3 1135 aa17.11■□□□□ 0.33
LIMS3-203ENST00000480744 PIK3AP1Q6ZUJ8 805 aa17.11■□□□□ 0.33
LIMS3-203ENST00000480744 RHPN2Q8IUC4 686 aa17.11■□□□□ 0.33
LIMS3-203ENST00000480744 HELQQ8TDG4 1101 aa17.11■□□□□ 0.33
LIMS3-203ENST00000480744 OXER1Q8TDS5 423 aa17.11■□□□□ 0.33
LIMS3-203ENST00000480744 MSLNLQ96KJ4 702 aa17.11■□□□□ 0.33
LIMS3-203ENST00000480744 ZNF558Q96NG5 402 aa17.11■□□□□ 0.33
LIMS3-203ENST00000480744 FDXACB1Q9BRP7 624 aaPredicted RBP17.11■□□□□ 0.33
LIMS3-203ENST00000480744 ENTPD7Q9NQZ7 604 aa17.11■□□□□ 0.33
LIMS3-203ENST00000480744 DACT1Q9NYF0 836 aa17.11■□□□□ 0.33
LIMS3-203ENST00000480744 SUCLA2Q9P2R7 463 aaPredicted RBP17.11■□□□□ 0.33
LIMS3-203ENST00000480744 PUF60Q9UHX1 559 aaKnown RBP17.11■□□□□ 0.33
LIMS3-203ENST00000480744 SFPQP23246 707 aaKnown RBP eCLIP17.1■□□□□ 0.33
LIMS3-203ENST00000480744 PLA2G5P39877 138 aa17.1■□□□□ 0.33
LIMS3-203ENST00000480744 AK2P54819 239 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms