RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 DSTYKQ6XUX3 929 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 SZRD1Q7Z422 152 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 TBC1D19Q8N5T2 526 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 SH3TC2Q8TF17 1288 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 EMILIN3Q9NT22 766 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 MYO3BQ8WXR4 1341 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 FGGP02679 453 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 AARSP49588 968 aaKnown RBP eCLIP10.18□□□□□ -0.788e-9■□□□□ 10.9
VEGFA-212ENST00000480614 CMTR1Q8N1G2 835 aaKnown RBP10.18□□□□□ -0.78
VEGFA-212ENST00000480614 TSSK1BQ9BXA7 367 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 SELENONQ9NZV5 590 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 LOC102724428A0A0B4J2F2 783 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 NDUFA10O95299 355 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 SIK1P57059 783 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 DYNC1I2Q13409 638 aaKnown RBP10.18□□□□□ -0.78
VEGFA-212ENST00000480614 OR6B2Q6IFH4 312 aa10.18□□□□□ -0.78
VEGFA-212ENST00000480614 GRID2IPA4D2P6 1211 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 MOCS3O95396 460 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 C1orf146Q5VVC0 180 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 NR1H4Q96RI1 486 aaPredicted RBP10.17□□□□□ -0.78
VEGFA-212ENST00000480614 NEK2P51955 445 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 C2orf54Q08AI8 447 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 ZNF827Q17R98 1081 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 IFT43Q96FT9 208 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 TSC22D3Q99576 134 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 SLC10A5Q5PT55 438 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 OSBPL3Q9H4L5 887 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 EML4Q9HC35 981 aaKnown RBP10.17□□□□□ -0.78
VEGFA-212ENST00000480614 HACD3Q9P035 362 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 ZFP69BQ9UJL9 534 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 GOLGA8IPA6NC78 632 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 ANKS3Q6ZW76 656 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 BEST2Q8NFU1 509 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 TBCKQ8TEA7 893 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 TRPC5Q9UL62 973 aaPredicted RBP10.17□□□□□ -0.78
VEGFA-212ENST00000480614 MMP1P03956 469 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 PHKA1P46020 1223 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 ENOSF1Q7L5Y1 443 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 TRIML2Q8N7C3 387 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 TMEM35BQ8NCS4 154 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 ERVV-1B6SEH8 477 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 PHKG2P15735 406 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 SERPINB4P48594 390 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 RBL2Q08999 1139 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 BPIFA3Q9BQP9 254 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 SAYSD1Q9NPB0 183 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 CHGBP05060 677 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 IFNAR1P17181 557 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 ABCE1P61221 599 aaKnown RBP10.17□□□□□ -0.78
VEGFA-212ENST00000480614 EFTUD2Q15029 972 aaKnown RBP eCLIP10.17□□□□□ -0.783e-11■■■■■ 40.4
VEGFA-212ENST00000480614 SPICE1Q8N0Z3 855 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 KRT16P08779 473 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 FAM133BQ5BKY9 247 aaKnown RBP10.17□□□□□ -0.78
VEGFA-212ENST00000480614 C2orf40Q9H1Z8 148 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 LGALS16A8MUM7 142 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 ASNSP08243 561 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 IL10P22301 178 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 TTC23LQ6PF05 361 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 NSUN7Q8NE18 718 aaKnown RBP10.17□□□□□ -0.78
VEGFA-212ENST00000480614 GPT2Q8TD30 523 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 KDM4CQ9H3R0 1056 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 TBK1Q9UHD2 729 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 AATKQ6ZMQ8 1374 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 PFASO15067 1338 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 USP17L3A6NCW0 530 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 USP17L4A6NCW7 530 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 ANP32DO95626 131 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 USP17L1Q7RTZ2 530 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 ADAM22Q9P0K1 906 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 SEL1LQ9UBV2 794 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 SUGT1Q9Y2Z0 365 aa10.17□□□□□ -0.78
VEGFA-212ENST00000480614 CRKLP46109 303 aaKnown RBP10.16□□□□□ -0.78
VEGFA-212ENST00000480614 TMEM179Q6ZVK1 233 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 CATSPER4Q7RTX7 472 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 SCFD1Q8WVM8 642 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 SRPRBQ9Y5M8 271 aaKnown RBP10.16□□□□□ -0.78
VEGFA-212ENST00000480614 ATICP31939 592 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 MXD4Q14582 209 aaPredicted RBP10.16□□□□□ -0.78
VEGFA-212ENST00000480614 ZNF579Q8NAF0 562 aaKnown RBP10.16□□□□□ -0.78
VEGFA-212ENST00000480614 ANLNQ9NQW6 1124 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 PREX2Q70Z35 1606 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 CFAP73A6NFT4 308 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 COBLO75128 1261 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 CDH2P19022 906 aaPredicted RBP10.16□□□□□ -0.78
VEGFA-212ENST00000480614 ADORA1P30542 326 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 ADD2P35612 726 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 ZC3H12BQ5HYM0 836 aaKnown RBP10.16□□□□□ -0.78
VEGFA-212ENST00000480614 SP110Q9HB58 689 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 E5RI56 91 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 PPCSQ9HAB8 311 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 INTUQ9ULD6 942 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 RFX7Q2KHR2 1363 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 ICA1LQ8NDH6 482 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 PCDHB8Q9UN66 801 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 ADCY10Q96PN6 1610 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 PTPRKQ15262 1439 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 MKRN3Q13064 507 aaKnown RBP10.16□□□□□ -0.78
VEGFA-212ENST00000480614 BRIP1Q9BX63 1249 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 CEP72Q9P209 647 aa10.16□□□□□ -0.78
VEGFA-212ENST00000480614 FEM1BQ9UK73 627 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms