RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 DHX33Q9H6R0 707 aaKnown RBP13.64□□□□□ -0.23
TRA2B-212ENST00000480461 CDHR5Q9HBB8 845 aa13.64□□□□□ -0.23
TRA2B-212ENST00000480461 XPNPEP1Q9NQW7 623 aa13.64□□□□□ -0.23
TRA2B-212ENST00000480461 TUBE1Q9UJT0 475 aa13.64□□□□□ -0.23
TRA2B-212ENST00000480461 HCN4Q9Y3Q4 1203 aa13.64□□□□□ -0.23
TRA2B-212ENST00000480461 STK24Q9Y6E0 443 aa13.64□□□□□ -0.23
TRA2B-212ENST00000480461 MROH7Q68CQ1 1323 aa13.64□□□□□ -0.23
TRA2B-212ENST00000480461 COL1A2P08123 1366 aa13.63□□□□□ -0.23
TRA2B-212ENST00000480461 TCHHQ07283 1943 aa13.63□□□□□ -0.23
TRA2B-212ENST00000480461 GADD45BO75293 160 aaPredicted RBP13.63□□□□□ -0.23
TRA2B-212ENST00000480461 EYA4O95677 639 aa13.63□□□□□ -0.23
TRA2B-212ENST00000480461 GNAT1P11488 350 aa13.63□□□□□ -0.23
TRA2B-212ENST00000480461 CMA1P23946 247 aa13.63□□□□□ -0.23
TRA2B-212ENST00000480461 SLC12A3P55017 1021 aa13.63□□□□□ -0.23
TRA2B-212ENST00000480461 E2F4Q16254 413 aa13.63□□□□□ -0.23
TRA2B-212ENST00000480461 TPRNQ4KMQ1 711 aa13.63□□□□□ -0.23
TRA2B-212ENST00000480461 ARSHQ5FYA8 562 aa13.63□□□□□ -0.23
TRA2B-212ENST00000480461 LRRC71Q8N4P6 559 aa13.63□□□□□ -0.23
TRA2B-212ENST00000480461 MTRQ99707 1265 aa13.63□□□□□ -0.23
TRA2B-212ENST00000480461 BHMT2Q9H2M3 363 aa13.63□□□□□ -0.23
TRA2B-212ENST00000480461 GOLPH3LQ9H4A5 285 aa13.63□□□□□ -0.23
TRA2B-212ENST00000480461 SUGCTQ9HAC7 445 aa13.63□□□□□ -0.23
TRA2B-212ENST00000480461 BMP2KQ9NSY1 1161 aaPredicted RBP13.63□□□□□ -0.23
TRA2B-212ENST00000480461 MSRAQ9UJ68 235 aa13.63□□□□□ -0.23
TRA2B-212ENST00000480461 DNM3Q9UQ16 869 aa13.63□□□□□ -0.23
TRA2B-212ENST00000480461 HPSEQ9Y251 543 aa13.63□□□□□ -0.23
TRA2B-212ENST00000480461 YBX2Q9Y2T7 364 aaKnown RBP13.63□□□□□ -0.23
TRA2B-212ENST00000480461 TRIP12Q14669 1992 aaPredicted RBP13.63□□□□□ -0.23
TRA2B-212ENST00000480461 TRANK1O15050 2925 aa13.62□□□□□ -0.23
TRA2B-212ENST00000480461 FAM237AA0A1B0GTK4 181 aa13.62□□□□□ -0.23
TRA2B-212ENST00000480461 A0A1B0GVL5 298 aa13.62□□□□□ -0.23
TRA2B-212ENST00000480461 SMIM35A0A1B0GVV1 85 aa13.62□□□□□ -0.23
TRA2B-212ENST00000480461 TLR3O15455 904 aaKnown RBP13.62□□□□□ -0.23
TRA2B-212ENST00000480461 SLC26A4O43511 780 aa13.62□□□□□ -0.23
TRA2B-212ENST00000480461 CHRNA1P02708 482 aa13.62□□□□□ -0.23
TRA2B-212ENST00000480461 PLA2G4BP0C869 781 aa13.62□□□□□ -0.23
TRA2B-212ENST00000480461 CKBP12277 381 aa13.62□□□□□ -0.23
TRA2B-212ENST00000480461 CYP2C18P33260 490 aa13.62□□□□□ -0.23
TRA2B-212ENST00000480461 CLCN3P51790 818 aa13.62□□□□□ -0.23
TRA2B-212ENST00000480461 TBC1D8BQ0IIM8 1120 aa13.62□□□□□ -0.23
TRA2B-212ENST00000480461 MCM6Q14566 821 aa13.62□□□□□ -0.23
TRA2B-212ENST00000480461 MBTPS1Q14703 1052 aa13.62□□□□□ -0.23
TRA2B-212ENST00000480461 ZNF618Q5T7W0 954 aa13.62□□□□□ -0.23
TRA2B-212ENST00000480461 PADI6Q6TGC4 694 aa13.62□□□□□ -0.23
TRA2B-212ENST00000480461 C1orf186Q6ZWK4 172 aa13.62□□□□□ -0.23
TRA2B-212ENST00000480461 RPAINQ86UA6 219 aa13.62□□□□□ -0.23
TRA2B-212ENST00000480461 TMEM199Q8N511 208 aa13.62□□□□□ -0.23
TRA2B-212ENST00000480461 METTL13Q8N6R0 699 aa13.62□□□□□ -0.23
TRA2B-212ENST00000480461 PDILTQ8N807 584 aa13.62□□□□□ -0.23
TRA2B-212ENST00000480461 SYT2Q8N9I0 419 aaPredicted RBP13.62□□□□□ -0.23
TRA2B-212ENST00000480461 HERVK_113Q902F9 699 aa13.62□□□□□ -0.23
TRA2B-212ENST00000480461 TMEM143Q96AN5 459 aa13.62□□□□□ -0.23
TRA2B-212ENST00000480461 CALML4Q96GE6 196 aa13.62□□□□□ -0.23
TRA2B-212ENST00000480461 LRFN3Q9BTN0 628 aa13.62□□□□□ -0.23
TRA2B-212ENST00000480461 RUSC1Q9BVN2 902 aa13.62□□□□□ -0.23
TRA2B-212ENST00000480461 PPP1R12CQ9BZL4 782 aa13.62□□□□□ -0.23
TRA2B-212ENST00000480461 FAM49AQ9H0Q0 323 aaPredicted RBP13.62□□□□□ -0.23
TRA2B-212ENST00000480461 WNT8AQ9H1J5 351 aa13.62□□□□□ -0.23
TRA2B-212ENST00000480461 TSPYL2Q9H2G4 693 aaPredicted RBP13.62□□□□□ -0.23
TRA2B-212ENST00000480461 MYH9P35579 1960 aaKnown RBP13.62□□□□□ -0.23
TRA2B-212ENST00000480461 NPHP3-ACAD11A0A0J9YXS1 232 aa13.61□□□□□ -0.23
TRA2B-212ENST00000480461 A0A1W2PQ27 194 aa13.61□□□□□ -0.23
TRA2B-212ENST00000480461 A0A1W2PQ64 194 aa13.61□□□□□ -0.23
TRA2B-212ENST00000480461 A0A1W2PQD8 194 aa13.61□□□□□ -0.23
TRA2B-212ENST00000480461 MAGEB2O15479 319 aa13.61□□□□□ -0.23
TRA2B-212ENST00000480461 PFKFB1P16118 471 aa13.61□□□□□ -0.23
TRA2B-212ENST00000480461 CYP11B2P19099 503 aa13.61□□□□□ -0.23
TRA2B-212ENST00000480461 THPOP40225 353 aa13.61□□□□□ -0.23
TRA2B-212ENST00000480461 KCNQ1P51787 676 aa13.61□□□□□ -0.23
TRA2B-212ENST00000480461 NDUFA8P51970 172 aa13.61□□□□□ -0.23
TRA2B-212ENST00000480461 RBL2Q08999 1139 aa13.61□□□□□ -0.23
TRA2B-212ENST00000480461 TMEM62Q0P6H9 643 aa13.61□□□□□ -0.23
TRA2B-212ENST00000480461 RRAGBQ5VZM2 374 aa13.61□□□□□ -0.23
TRA2B-212ENST00000480461 RINT1Q6NUQ1 792 aa13.61□□□□□ -0.23
TRA2B-212ENST00000480461 KSR1Q8IVT5 923 aa13.61□□□□□ -0.23
TRA2B-212ENST00000480461 RAD54LQ92698 747 aa13.61□□□□□ -0.23
TRA2B-212ENST00000480461 ZNF668Q96K58 619 aaPredicted RBP13.61□□□□□ -0.23
TRA2B-212ENST00000480461 NT5C3AQ9H0P0 336 aa13.61□□□□□ -0.23
TRA2B-212ENST00000480461 HIPK3Q9H422 1215 aa13.61□□□□□ -0.23
TRA2B-212ENST00000480461 SLC28A3Q9HAS3 691 aa13.61□□□□□ -0.23
TRA2B-212ENST00000480461 GPRC5CQ9NQ84 441 aa13.61□□□□□ -0.23
TRA2B-212ENST00000480461 NOD1Q9Y239 953 aa13.61□□□□□ -0.23
TRA2B-212ENST00000480461 PIEZO1Q92508 2521 aa13.61□□□□□ -0.23
TRA2B-212ENST00000480461 ARHGEF35A5YM69 484 aa13.6□□□□□ -0.23
TRA2B-212ENST00000480461 POLR2DO15514 142 aaKnown RBP13.6□□□□□ -0.23
TRA2B-212ENST00000480461 USO1O60763 962 aaKnown RBP13.6□□□□□ -0.23
TRA2B-212ENST00000480461 GPR32O75388 356 aa13.6□□□□□ -0.23
TRA2B-212ENST00000480461 VTNP04004 478 aa13.6□□□□□ -0.23
TRA2B-212ENST00000480461 IQCF3P0C7M6 154 aa13.6□□□□□ -0.23
TRA2B-212ENST00000480461 ARL2P36404 184 aa13.6□□□□□ -0.23
TRA2B-212ENST00000480461 RFC5P40937 340 aa13.6□□□□□ -0.23
TRA2B-212ENST00000480461 CCL23P55773 120 aa13.6□□□□□ -0.23
TRA2B-212ENST00000480461 MGAT3Q09327 533 aa13.6□□□□□ -0.23
TRA2B-212ENST00000480461 MAPK7Q13164 816 aa13.6□□□□□ -0.23
TRA2B-212ENST00000480461 DHX8Q14562 1220 aaKnown RBP13.6□□□□□ -0.23
TRA2B-212ENST00000480461 EMC2Q15006 297 aa13.6□□□□□ -0.23
TRA2B-212ENST00000480461 LONRF3Q496Y0 759 aa13.6□□□□□ -0.23
TRA2B-212ENST00000480461 FAM26DQ5JW98 314 aa13.6□□□□□ -0.23
TRA2B-212ENST00000480461 TAF2Q6P1X5 1199 aa13.6□□□□□ -0.23
TRA2B-212ENST00000480461 MAEAQ7L5Y9 396 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms