RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 KATNAL1Q9BW62 490 aa19.42■□□□□ 0.7
UPF3A-206ENST00000480362 SUGCTQ9HAC7 445 aa19.42■□□□□ 0.7
UPF3A-206ENST00000480362 C17orf75Q9HAS0 396 aa19.42■□□□□ 0.7
UPF3A-206ENST00000480362 GRPEL1Q9HAV7 217 aa19.42■□□□□ 0.7
UPF3A-206ENST00000480362 MYH11P35749 1972 aa19.41■□□□□ 0.7
UPF3A-206ENST00000480362 RRN3P2A6NIE6 340 aa19.41■□□□□ 0.7
UPF3A-206ENST00000480362 PSMA7O14818 248 aa19.41■□□□□ 0.7
UPF3A-206ENST00000480362 MAGEB2O15479 319 aa19.41■□□□□ 0.7
UPF3A-206ENST00000480362 GAS2O43903 313 aaKnown RBP19.41■□□□□ 0.7
UPF3A-206ENST00000480362 GCNT3O95395 438 aa19.41■□□□□ 0.7
UPF3A-206ENST00000480362 C22orf31O95567 290 aa19.41■□□□□ 0.7
UPF3A-206ENST00000480362 HSPA1AP0DMV8 641 aaKnown RBP19.41■□□□□ 0.7
UPF3A-206ENST00000480362 HSPA1BP0DMV9 641 aaKnown RBP19.41■□□□□ 0.7
UPF3A-206ENST00000480362 SMIM10L2AP0DMW4 78 aa19.41■□□□□ 0.7
UPF3A-206ENST00000480362 SMIM10L2BP0DMW5 78 aa19.41■□□□□ 0.7
UPF3A-206ENST00000480362 MYBP10242 640 aa19.41■□□□□ 0.7
UPF3A-206ENST00000480362 MAPTP10636 758 aaKnown RBP19.41■□□□□ 0.7
UPF3A-206ENST00000480362 CST5P28325 142 aaPredicted RBP19.41■□□□□ 0.7
UPF3A-206ENST00000480362 CASP5P51878 434 aa19.41■□□□□ 0.7
UPF3A-206ENST00000480362 LBX1P52954 281 aa19.41■□□□□ 0.7
UPF3A-206ENST00000480362 RTP1P59025 263 aa19.41■□□□□ 0.7
UPF3A-206ENST00000480362 PAK1Q13153 545 aa19.41■□□□□ 0.7
UPF3A-206ENST00000480362 GRIK4Q16099 956 aa19.41■□□□□ 0.7
UPF3A-206ENST00000480362 KCNA10Q16322 511 aa19.41■□□□□ 0.7
UPF3A-206ENST00000480362 SLC9C1Q4G0N8 1177 aa19.41■□□□□ 0.7
UPF3A-206ENST00000480362 IER5Q5VY09 327 aa19.41■□□□□ 0.7
UPF3A-206ENST00000480362 LHX8Q68G74 356 aa19.41■□□□□ 0.7
UPF3A-206ENST00000480362 CCSAPQ6IQ19 270 aaPredicted RBP19.41■□□□□ 0.7
UPF3A-206ENST00000480362 CXCL17Q6UXB2 119 aa19.41■□□□□ 0.7
UPF3A-206ENST00000480362 EPM2AIP1Q7L775 607 aaPredicted RBP19.41■□□□□ 0.7
UPF3A-206ENST00000480362 CTU1Q7Z7A3 348 aaKnown RBP19.41■□□□□ 0.7
UPF3A-206ENST00000480362 ENOX1Q8TC92 643 aaKnown RBP19.41■□□□□ 0.7
UPF3A-206ENST00000480362 PPP1R13LQ8WUF5 828 aa19.41■□□□□ 0.7
UPF3A-206ENST00000480362 TCP11Q8WWU5 503 aa19.41■□□□□ 0.7
UPF3A-206ENST00000480362 BSNDQ8WZ55 320 aa19.41■□□□□ 0.7
UPF3A-206ENST00000480362 ZBTB10Q96DT7 871 aa19.41■□□□□ 0.7
UPF3A-206ENST00000480362 IFT74Q96LB3 600 aa19.41■□□□□ 0.7
UPF3A-206ENST00000480362 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.41■□□□□ 0.7
UPF3A-206ENST00000480362 SETD4Q9NVD3 440 aa19.41■□□□□ 0.7
UPF3A-206ENST00000480362 RWDD2AQ9UIY3 292 aa19.41■□□□□ 0.7
UPF3A-206ENST00000480362 GOLGA6L19H0YKK7 550 aa19.4■□□□□ 0.7
UPF3A-206ENST00000480362 IKBKBO14920 756 aa19.4■□□□□ 0.7
UPF3A-206ENST00000480362 PRPF6O94906 941 aaKnown RBP19.4■□□□□ 0.7
UPF3A-206ENST00000480362 KIF20AO95235 890 aa19.4■□□□□ 0.7
UPF3A-206ENST00000480362 CCNE1P24864 410 aa19.4■□□□□ 0.7
UPF3A-206ENST00000480362 CTCFP49711 727 aaPredicted RBP19.4■□□□□ 0.7
UPF3A-206ENST00000480362 MYL5Q02045 173 aa19.4■□□□□ 0.7
UPF3A-206ENST00000480362 MKRN4PQ13434 485 aaPredicted RBP19.4■□□□□ 0.7
UPF3A-206ENST00000480362 DRP2Q13474 957 aa19.4■□□□□ 0.7
UPF3A-206ENST00000480362 NCAPHQ15003 741 aa19.4■□□□□ 0.7
UPF3A-206ENST00000480362 UVSSAQ2YD98 709 aa19.4■□□□□ 0.7
UPF3A-206ENST00000480362 ZC2HC1CQ53FD0 456 aaPredicted RBP19.4■□□□□ 0.7
UPF3A-206ENST00000480362 EFCAB12Q6NXP0 572 aa19.4■□□□□ 0.7
UPF3A-206ENST00000480362 RNF180Q86T96 592 aa19.4■□□□□ 0.7
UPF3A-206ENST00000480362 LRRC71Q8N4P6 559 aa19.4■□□□□ 0.7
UPF3A-206ENST00000480362 ZNF507Q8TCN5 953 aa19.4■□□□□ 0.7
UPF3A-206ENST00000480362 SCFD1Q8WVM8 642 aa19.4■□□□□ 0.7
UPF3A-206ENST00000480362 SPIRE2Q8WWL2 714 aa19.4■□□□□ 0.7
UPF3A-206ENST00000480362 P2RX5Q93086 422 aa19.4■□□□□ 0.7
UPF3A-206ENST00000480362 UNC93B1Q9H1C4 597 aa19.4■□□□□ 0.7
UPF3A-206ENST00000480362 CCDC169A6NNP5 214 aa19.39■□□□□ 0.69
UPF3A-206ENST00000480362 K7ENM7 598 aa19.39■□□□□ 0.69
UPF3A-206ENST00000480362 EIF3DO15371 548 aaKnown RBP eCLIP19.39■□□□□ 0.69
UPF3A-206ENST00000480362 ASGR1P07306 291 aa19.39■□□□□ 0.69
UPF3A-206ENST00000480362 GLRA2P23416 452 aa19.39■□□□□ 0.69
UPF3A-206ENST00000480362 NPTX2P47972 431 aa19.39■□□□□ 0.69
UPF3A-206ENST00000480362 MRE11P49959 708 aa19.39■□□□□ 0.69
UPF3A-206ENST00000480362 SMTNP53814 917 aa19.39■□□□□ 0.69
UPF3A-206ENST00000480362 DMP1Q13316 513 aaPredicted RBP19.39■□□□□ 0.69
UPF3A-206ENST00000480362 MARCH8Q5T0T0 291 aa19.39■□□□□ 0.69
UPF3A-206ENST00000480362 MTHFD1LQ6UB35 978 aa19.39■□□□□ 0.69
UPF3A-206ENST00000480362 STXBP4Q6ZWJ1 553 aa19.39■□□□□ 0.69
UPF3A-206ENST00000480362 HAUS6Q7Z4H7 955 aa19.39■□□□□ 0.69
UPF3A-206ENST00000480362 NELFCDQ8IXH7 590 aa19.39■□□□□ 0.69
UPF3A-206ENST00000480362 METTL13Q8N6R0 699 aa19.39■□□□□ 0.69
UPF3A-206ENST00000480362 PCSK9Q8NBP7 692 aaKnown RBP19.39■□□□□ 0.69
UPF3A-206ENST00000480362 RETREG2Q8NC44 543 aa19.39■□□□□ 0.69
UPF3A-206ENST00000480362 ASAP3Q8TDY4 903 aa19.39■□□□□ 0.69
UPF3A-206ENST00000480362 NTPCRQ9BSD7 190 aaKnown RBP19.39■□□□□ 0.69
UPF3A-206ENST00000480362 SEMA6BQ9H3T3 888 aa19.39■□□□□ 0.69
UPF3A-206ENST00000480362 KMT5AQ9NQR1 393 aa19.39■□□□□ 0.69
UPF3A-206ENST00000480362 KCNG1Q9UIX4 513 aa19.39■□□□□ 0.69
UPF3A-206ENST00000480362 PCDHB13Q9Y5F0 798 aa19.39■□□□□ 0.69
UPF3A-206ENST00000480362 NRCAMQ92823 1304 aa19.39■□□□□ 0.69
UPF3A-206ENST00000480362 TRIM49BA6NDI0 452 aa19.38■□□□□ 0.69
UPF3A-206ENST00000480362 SLC16A4O15374 487 aa19.38■□□□□ 0.69
UPF3A-206ENST00000480362 DNM2P50570 870 aa19.38■□□□□ 0.69
UPF3A-206ENST00000480362 PMS1P54277 932 aaKnown RBP19.38■□□□□ 0.69
UPF3A-206ENST00000480362 NCKAP1LP55160 1127 aa19.38■□□□□ 0.69
UPF3A-206ENST00000480362 PPP2R5AQ15172 486 aa19.38■□□□□ 0.69
UPF3A-206ENST00000480362 SPATA1Q5VX52 437 aa19.38■□□□□ 0.69
UPF3A-206ENST00000480362 ANKRD40Q6AI12 368 aa19.38■□□□□ 0.69
UPF3A-206ENST00000480362 CENPPQ6IPU0 288 aa19.38■□□□□ 0.69
UPF3A-206ENST00000480362 SLC17A8Q8NDX2 589 aa19.38■□□□□ 0.69
UPF3A-206ENST00000480362 PRPF31Q8WWY3 499 aaKnown RBP19.38■□□□□ 0.69
UPF3A-206ENST00000480362 STRA6Q9BX79 667 aa19.38■□□□□ 0.69
UPF3A-206ENST00000480362 SUCLA2Q9P2R7 463 aaPredicted RBP19.38■□□□□ 0.69
UPF3A-206ENST00000480362 HDAC6Q9UBN7 1215 aa19.38■□□□□ 0.69
UPF3A-206ENST00000480362 BICDL2A1A5D9 508 aa19.37■□□□□ 0.69
UPF3A-206ENST00000480362 MYCP01106 439 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms