RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 GTF2F1P35269 517 aaKnown RBP eCLIP15.97■□□□□ 0.154e-7■■■■■ 27
PKNOX1-206ENST00000480179 SP2Q02086 613 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 PRKCEQ02156 737 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 KCNH2Q12809 1159 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 SNAPC2Q13487 334 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 LDLRAD1Q5T700 205 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 MIS18BP1Q6P0N0 1132 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 RRAGAQ7L523 313 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 CYFIP1Q7L576 1253 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 CCDC60Q8IWA6 550 aaPredicted RBP15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 SLC10A4Q96EP9 437 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 DRC1Q96MC2 740 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 GBP3Q9H0R5 595 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 AGPAT3Q9NRZ7 376 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 LARSQ9P2J5 1176 aaKnown RBP15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 SEPT9Q9UHD8 586 aaPredicted RBP15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 GPR25O00155 361 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 DYNC1I1O14576 645 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 ALDH1A1P00352 501 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 AFPP02771 609 aaKnown RBP15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 PGK2P07205 417 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 SUPT20HL2P0C7V6 817 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 XRCC5P13010 732 aaKnown RBP15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 INHBEP58166 350 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 APBA1Q02410 837 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 WDR78Q5VTH9 848 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 TCERG1LQ5VWI1 586 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 PDXDC1Q6P996 788 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 CACNA2D4Q7Z3S7 1137 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 FAM186BQ8IYM0 893 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 CEP170P1Q96L14 293 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 WDR24Q96S15 920 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 TIPINQ9BVW5 301 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 STRA6Q9BX79 667 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 METTL14Q9HCE5 456 aaKnown RBP15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 RBPJLQ9UBG7 517 aa15.97■□□□□ 0.15
PKNOX1-206ENST00000480179 LRRC53A6NM62 1247 aa15.96■□□□□ 0.15
PKNOX1-206ENST00000480179 FANCGO15287 622 aa15.96■□□□□ 0.15
PKNOX1-206ENST00000480179 DKC1O60832 514 aaKnown RBP eCLIP15.96■□□□□ 0.15
PKNOX1-206ENST00000480179 SLC25A27O95847 323 aa15.96■□□□□ 0.15
PKNOX1-206ENST00000480179 ICAM3P32942 547 aa15.96■□□□□ 0.15
PKNOX1-206ENST00000480179 PEX3P56589 373 aa15.96■□□□□ 0.15
PKNOX1-206ENST00000480179 NFIL3Q16649 462 aa15.96■□□□□ 0.15
PKNOX1-206ENST00000480179 ARHGAP29Q52LW3 1261 aa15.96■□□□□ 0.15
PKNOX1-206ENST00000480179 SPRYD7Q5W111 196 aa15.96■□□□□ 0.15
PKNOX1-206ENST00000480179 ABHD15Q6UXT9 468 aa15.96■□□□□ 0.15
PKNOX1-206ENST00000480179 OTUD6AQ7L8S5 288 aa15.96■□□□□ 0.15
PKNOX1-206ENST00000480179 FAM133AQ8N9E0 248 aa15.96■□□□□ 0.15
PKNOX1-206ENST00000480179 BAP1Q92560 729 aa15.96■□□□□ 0.15
PKNOX1-206ENST00000480179 NHEJ1Q9H9Q4 299 aaPredicted RBP15.96■□□□□ 0.15
PKNOX1-206ENST00000480179 NLRC4Q9NPP4 1024 aa15.96■□□□□ 0.15
PKNOX1-206ENST00000480179 REXO2Q9Y3B8 237 aaKnown RBP15.96■□□□□ 0.15
PKNOX1-206ENST00000480179 MYH9P35579 1960 aaKnown RBP15.96■□□□□ 0.14
PKNOX1-206ENST00000480179 SLC16A4O15374 487 aa15.95■□□□□ 0.14
PKNOX1-206ENST00000480179 STBD1O95210 358 aa15.95■□□□□ 0.14
PKNOX1-206ENST00000480179 MAPTP10636 758 aaKnown RBP15.95■□□□□ 0.14
PKNOX1-206ENST00000480179 UBA1P22314 1058 aaKnown RBP15.95■□□□□ 0.14
PKNOX1-206ENST00000480179 EDNRBP24530 442 aa15.95■□□□□ 0.14
PKNOX1-206ENST00000480179 CASQ1P31415 396 aa15.95■□□□□ 0.14
PKNOX1-206ENST00000480179 CYLC1P35663 651 aaPredicted RBP15.95■□□□□ 0.14
PKNOX1-206ENST00000480179 PSMC2P35998 433 aaKnown RBP15.95■□□□□ 0.14
PKNOX1-206ENST00000480179 PPP2R3AQ06190 1150 aa15.95■□□□□ 0.14
PKNOX1-206ENST00000480179 ALCAMQ13740 583 aa15.95■□□□□ 0.14
PKNOX1-206ENST00000480179 EEPD1Q7L9B9 569 aa15.95■□□□□ 0.14
PKNOX1-206ENST00000480179 GOLGA5Q8TBA6 731 aa15.95■□□□□ 0.14
PKNOX1-206ENST00000480179 ACCSQ96QU6 501 aa15.95■□□□□ 0.14
PKNOX1-206ENST00000480179 MMP19Q99542 508 aa15.95■□□□□ 0.14
PKNOX1-206ENST00000480179 IRX2Q9BZI1 471 aaPredicted RBP15.95■□□□□ 0.14
PKNOX1-206ENST00000480179 CEP72Q9P209 647 aa15.95■□□□□ 0.14
PKNOX1-206ENST00000480179 IGSF9BQ9UPX0 1349 aa15.95■□□□□ 0.14
PKNOX1-206ENST00000480179 MANSC4A6NHS7 340 aaPredicted RBP15.94■□□□□ 0.14
PKNOX1-206ENST00000480179 TISP43B9A030 160 aa15.94■□□□□ 0.14
PKNOX1-206ENST00000480179 KIF5CO60282 957 aa15.94■□□□□ 0.14
PKNOX1-206ENST00000480179 FKTNO75072 461 aa15.94■□□□□ 0.14
PKNOX1-206ENST00000480179 NOL4O94818 638 aa15.94■□□□□ 0.14
PKNOX1-206ENST00000480179 PLEKP08567 350 aaPredicted RBP15.94■□□□□ 0.14
PKNOX1-206ENST00000480179 COPB2P35606 906 aa15.94■□□□□ 0.14
PKNOX1-206ENST00000480179 POLR2FP61218 127 aaKnown RBP15.94■□□□□ 0.14
PKNOX1-206ENST00000480179 Q3C1V9 767 aa15.94■□□□□ 0.14
PKNOX1-206ENST00000480179 HAUS6Q7Z4H7 955 aa15.94■□□□□ 0.14
PKNOX1-206ENST00000480179 UNCXA6NJT0 531 aa15.94■□□□□ 0.14
PKNOX1-206ENST00000480179 CCDC169A6NNP5 214 aa15.94■□□□□ 0.14
PKNOX1-206ENST00000480179 SLC34A2O95436 690 aa15.94■□□□□ 0.14
PKNOX1-206ENST00000480179 CYP2C8P10632 490 aa15.94■□□□□ 0.14
PKNOX1-206ENST00000480179 HNRNPH3P31942 346 aaKnown RBP15.94■□□□□ 0.14
PKNOX1-206ENST00000480179 ARHGAP25P42331 645 aa15.94■□□□□ 0.14
PKNOX1-206ENST00000480179 KCTD2Q14681 263 aa15.94■□□□□ 0.14
PKNOX1-206ENST00000480179 SLC35C1Q96A29 364 aa15.94■□□□□ 0.14
PKNOX1-206ENST00000480179 KIFC3Q9BVG8 833 aa15.94■□□□□ 0.14
PKNOX1-206ENST00000480179 CFHR5Q9BXR6 569 aa15.94■□□□□ 0.14
PKNOX1-206ENST00000480179 EDEM3Q9BZQ6 932 aa15.94■□□□□ 0.14
PKNOX1-206ENST00000480179 GANQ9H2C0 597 aa15.94■□□□□ 0.14
PKNOX1-206ENST00000480179 DMAC2Q9NW81 257 aa15.94■□□□□ 0.14
PKNOX1-206ENST00000480179 FRMD4BQ9Y2L6 1034 aa15.94■□□□□ 0.14
PKNOX1-206ENST00000480179 SYNGAP1Q96PV0 1343 aa15.93■□□□□ 0.14
PKNOX1-206ENST00000480179 EXOC3O60645 756 aa15.93■□□□□ 0.14
PKNOX1-206ENST00000480179 URI1O94763 535 aaPredicted RBP15.93■□□□□ 0.14
PKNOX1-206ENST00000480179 ABL1P00519 1130 aa15.93■□□□□ 0.14
PKNOX1-206ENST00000480179 ZBTB48P10074 688 aaPredicted RBP15.93■□□□□ 0.14
PKNOX1-206ENST00000480179 ACTN1P12814 892 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms