RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 ST3GAL5Q9UNP4 418 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 SORCS3Q9UPU3 1222 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 NFASCO94856 1347 aa8.01□□□□□ -1.13
COL17A1-205ENST00000480127 FNDC1Q4ZHG4 1894 aaPredicted RBP8□□□□□ -1.13
COL17A1-205ENST00000480127 IGKV6D-21A0A0A0MT36 114 aa8□□□□□ -1.13
COL17A1-205ENST00000480127 C2CD4DB7Z1M9 353 aa8□□□□□ -1.13
COL17A1-205ENST00000480127 HBP1O60381 514 aa8□□□□□ -1.13
COL17A1-205ENST00000480127 RPS6KA5O75582 802 aa8□□□□□ -1.13
COL17A1-205ENST00000480127 ATG7O95352 703 aa8□□□□□ -1.13
COL17A1-205ENST00000480127 SRGAP2BP0DMP2 458 aa8□□□□□ -1.13
COL17A1-205ENST00000480127 ARP10275 920 aa8□□□□□ -1.13
COL17A1-205ENST00000480127 ZSCAN20P17040 1043 aaPredicted RBP8□□□□□ -1.13
COL17A1-205ENST00000480127 LAG3P18627 525 aa8□□□□□ -1.13
COL17A1-205ENST00000480127 RPS6KB1P23443 525 aa8□□□□□ -1.13
COL17A1-205ENST00000480127 SREBF1P36956 1147 aa8□□□□□ -1.13
COL17A1-205ENST00000480127 RCAN1P53805 252 aa8□□□□□ -1.13
COL17A1-205ENST00000480127 EXOSC10Q01780 885 aaKnown RBP8□□□□□ -1.13
COL17A1-205ENST00000480127 ITGB3BPQ13352 177 aaPredicted RBP8□□□□□ -1.13
COL17A1-205ENST00000480127 MTMR3Q13615 1198 aa8□□□□□ -1.13
COL17A1-205ENST00000480127 DSC3Q14574 896 aa8□□□□□ -1.13
COL17A1-205ENST00000480127 SMAP1Q8IYB5 467 aaPredicted RBP8□□□□□ -1.13
COL17A1-205ENST00000480127 UBALD2Q8IYN6 164 aa8□□□□□ -1.13
COL17A1-205ENST00000480127 FAM167AQ96KS9 214 aa8□□□□□ -1.13
COL17A1-205ENST00000480127 CCDC43Q96MW1 224 aaKnown RBP8□□□□□ -1.13
COL17A1-205ENST00000480127 CASD1Q96PB1 797 aa8□□□□□ -1.13
COL17A1-205ENST00000480127 ADAM7Q9H2U9 754 aa8□□□□□ -1.13
COL17A1-205ENST00000480127 POMKQ9H5K3 350 aa8□□□□□ -1.13
COL17A1-205ENST00000480127 ELAC1Q9H777 363 aaKnown RBP8□□□□□ -1.13
COL17A1-205ENST00000480127 NGRNQ9NPE2 291 aaKnown RBP8□□□□□ -1.13
COL17A1-205ENST00000480127 TSHZ2Q9NRE2 1034 aa8□□□□□ -1.13
COL17A1-205ENST00000480127 RNF19AQ9NV58 838 aa8□□□□□ -1.13
COL17A1-205ENST00000480127 TMEM161AQ9NX61 479 aa8□□□□□ -1.13
COL17A1-205ENST00000480127 CEP131Q9UPN4 1083 aa8□□□□□ -1.13
COL17A1-205ENST00000480127 NR2E1Q9Y466 385 aa8□□□□□ -1.13
COL17A1-205ENST00000480127 HCFC2Q9Y5Z7 792 aa8□□□□□ -1.13
COL17A1-205ENST00000480127 LOXHD1Q8IVV2 1947 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 SPDYE4A6NLX3 237 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 WDR64B1ANS9 1081 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 ZBTB42B2RXF5 422 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 GPR182O15218 404 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 GPR32O75388 356 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 CDKL5O76039 1030 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 CCNE2O96020 404 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 CDC27P30260 824 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 PBX3P40426 434 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 DNM2P50570 870 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 CRYBB1P53674 252 aaPredicted RBP7.99□□□□□ -1.13
COL17A1-205ENST00000480127 KIZQ2M2Z5 673 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 ZNF484Q5JVG2 852 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 LRCH2Q5VUJ6 765 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 ASTLQ6HA08 431 aaPredicted RBP7.99□□□□□ -1.13
COL17A1-205ENST00000480127 KCNT2Q6UVM3 1135 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 NIPA1Q7RTP0 329 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 ERMP1Q7Z2K6 904 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 FAM228AQ86W67 206 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 MRPL43Q8N983 215 aaKnown RBP7.99□□□□□ -1.13
COL17A1-205ENST00000480127 NLRP7Q8WX94 980 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 CASP10Q92851 521 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 NECTIN4Q96NY8 510 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 OSMRQ99650 979 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 C22orf23Q9BZE7 217 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 TMEM117Q9H0C3 514 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 ATP6V0A4Q9HBG4 840 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 NCOA5Q9HCD5 579 aaKnown RBP7.99□□□□□ -1.13
COL17A1-205ENST00000480127 ENTPD7Q9NQZ7 604 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 NRBP2Q9NSY0 501 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 VPS54Q9P1Q0 977 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 GABBR1Q9UBS5 961 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 PUF60Q9UHX1 559 aaKnown RBP7.99□□□□□ -1.13
COL17A1-205ENST00000480127 PCDHA10Q9Y5I2 948 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 SNX14Q9Y5W7 946 aa7.99□□□□□ -1.13
COL17A1-205ENST00000480127 COL1A2P08123 1366 aa7.98□□□□□ -1.13
COL17A1-205ENST00000480127 CFAP54Q96N23 3096 aa7.98□□□□□ -1.13
COL17A1-205ENST00000480127 CCDC194A0A1B0GVG4 234 aa7.98□□□□□ -1.13
COL17A1-205ENST00000480127 C2orf71A6NGG8 1288 aa7.98□□□□□ -1.13
COL17A1-205ENST00000480127 MEIS1O00470 390 aa7.98□□□□□ -1.13
COL17A1-205ENST00000480127 PRPF3O43395 683 aaKnown RBP7.98□□□□□ -1.13
COL17A1-205ENST00000480127 CLASP2O75122 1294 aaKnown RBP7.98□□□□□ -1.13
COL17A1-205ENST00000480127 C22orf31O95567 290 aa7.98□□□□□ -1.13
COL17A1-205ENST00000480127 ASGR2P07307 311 aa7.98□□□□□ -1.13
COL17A1-205ENST00000480127 WEE2P0C1S8 567 aa7.98□□□□□ -1.13
COL17A1-205ENST00000480127 ATP4AP20648 1035 aa7.98□□□□□ -1.13
COL17A1-205ENST00000480127 HSPA4P34932 840 aa7.98□□□□□ -1.13
COL17A1-205ENST00000480127 CLCN5P51795 746 aa7.98□□□□□ -1.13
COL17A1-205ENST00000480127 ITIH3Q06033 890 aa7.98□□□□□ -1.13
COL17A1-205ENST00000480127 TBC1D8BQ0IIM8 1120 aa7.98□□□□□ -1.13
COL17A1-205ENST00000480127 COL9A3Q14050 684 aaPredicted RBP7.98□□□□□ -1.13
COL17A1-205ENST00000480127 BMS1Q14692 1282 aaKnown RBP7.98□□□□□ -1.13
COL17A1-205ENST00000480127 TSGA10IPQ3SY00 556 aa7.98□□□□□ -1.13
COL17A1-205ENST00000480127 TPRNQ4KMQ1 711 aa7.98□□□□□ -1.13
COL17A1-205ENST00000480127 CWF19L1Q69YN2 538 aaKnown RBP7.98□□□□□ -1.13
COL17A1-205ENST00000480127 CES5AQ6NT32 575 aa7.98□□□□□ -1.13
COL17A1-205ENST00000480127 ZNF746Q6NUN9 644 aaPredicted RBP7.98□□□□□ -1.13
COL17A1-205ENST00000480127 ABHD15Q6UXT9 468 aa7.98□□□□□ -1.13
COL17A1-205ENST00000480127 MIER3Q7Z3K6 550 aa7.98□□□□□ -1.13
COL17A1-205ENST00000480127 TMC7Q7Z402 723 aa7.98□□□□□ -1.13
COL17A1-205ENST00000480127 FRMD5Q7Z6J6 570 aa7.98□□□□□ -1.13
COL17A1-205ENST00000480127 CCDC60Q8IWA6 550 aaPredicted RBP7.98□□□□□ -1.13
COL17A1-205ENST00000480127 ZDHHC14Q8IZN3 488 aa7.98□□□□□ -1.13
COL17A1-205ENST00000480127 SLC39A11Q8N1S5 342 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms