RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 CLCN4P51793 760 aa13.78□□□□□ -0.2
USP11-208ENST00000480104 KRT76Q01546 638 aa13.78□□□□□ -0.2
USP11-208ENST00000480104 PRKCQQ04759 706 aa13.78□□□□□ -0.2
USP11-208ENST00000480104 MTAPQ13126 283 aa13.78□□□□□ -0.2
USP11-208ENST00000480104 SF3A2Q15428 464 aaKnown RBP13.78□□□□□ -0.2
USP11-208ENST00000480104 ZBTB41Q5SVQ8 909 aa13.78□□□□□ -0.2
USP11-208ENST00000480104 TMEM173Q86WV6 379 aaPredicted RBP13.78□□□□□ -0.2
USP11-208ENST00000480104 ADAM32Q8TC27 787 aa13.78□□□□□ -0.2
USP11-208ENST00000480104 TMEM169Q96HH4 297 aa13.78□□□□□ -0.2
USP11-208ENST00000480104 RPP25Q9BUL9 199 aaKnown RBP13.78□□□□□ -0.2
USP11-208ENST00000480104 ANKFY1Q9P2R3 1169 aa13.78□□□□□ -0.2
USP11-208ENST00000480104 GINS2Q9Y248 185 aa13.78□□□□□ -0.2
USP11-208ENST00000480104 PCDHA1Q9Y5I3 950 aa13.78□□□□□ -0.2
USP11-208ENST00000480104 RNF113AO15541 343 aaKnown RBP13.77□□□□□ -0.21
USP11-208ENST00000480104 HOXA2O43364 376 aa13.77□□□□□ -0.21
USP11-208ENST00000480104 RPS6KA5O75582 802 aa13.77□□□□□ -0.21
USP11-208ENST00000480104 LAMP2P13473 410 aa13.77□□□□□ -0.21
USP11-208ENST00000480104 NRLP54845 237 aa13.77□□□□□ -0.21
USP11-208ENST00000480104 FAM189BP81408 668 aa13.77□□□□□ -0.21
USP11-208ENST00000480104 GHRHRQ02643 423 aa13.77□□□□□ -0.21
USP11-208ENST00000480104 GIT2Q14161 759 aa13.77□□□□□ -0.21
USP11-208ENST00000480104 SIM2Q14190 667 aaPredicted RBP13.77□□□□□ -0.21
USP11-208ENST00000480104 LAMA4Q16363 1823 aa13.77□□□□□ -0.21
USP11-208ENST00000480104 GNPTABQ3T906 1256 aa13.77□□□□□ -0.21
USP11-208ENST00000480104 SLC44A4Q53GD3 710 aa13.77□□□□□ -0.21
USP11-208ENST00000480104 GPATCH4Q5T3I0 446 aaKnown RBP13.77□□□□□ -0.21
USP11-208ENST00000480104 STPG1Q5TH74 334 aa13.77□□□□□ -0.21
USP11-208ENST00000480104 PDZD3Q86UT5 571 aa13.77□□□□□ -0.21
USP11-208ENST00000480104 ADGRF4Q8IZF3 695 aa13.77□□□□□ -0.21
USP11-208ENST00000480104 ABI1Q8IZP0 508 aa13.77□□□□□ -0.21
USP11-208ENST00000480104 CMASQ8NFW8 434 aaPredicted RBP13.77□□□□□ -0.21
USP11-208ENST00000480104 TMEM40Q8WWA1 233 aa13.77□□□□□ -0.21
USP11-208ENST00000480104 LSM14BQ9BX40 385 aaKnown RBP13.77□□□□□ -0.21
USP11-208ENST00000480104 ELAC1Q9H777 363 aaKnown RBP13.77□□□□□ -0.21
USP11-208ENST00000480104 ERAP1Q9NZ08 941 aa13.77□□□□□ -0.21
USP11-208ENST00000480104 ST3GAL5Q9UNP4 418 aa13.77□□□□□ -0.21
USP11-208ENST00000480104 SPTA1P02549 2419 aa13.76□□□□□ -0.21
USP11-208ENST00000480104 SDK1Q7Z5N4 2213 aa13.76□□□□□ -0.21
USP11-208ENST00000480104 DOCK5Q9H7D0 1870 aa13.76□□□□□ -0.21
USP11-208ENST00000480104 SPATA31C2B4DYI2 1134 aa13.76□□□□□ -0.21
USP11-208ENST00000480104 GIPC1O14908 333 aa13.76□□□□□ -0.21
USP11-208ENST00000480104 ORC4O43929 436 aa13.76□□□□□ -0.21
USP11-208ENST00000480104 RPS9P46781 194 aaKnown RBP13.76□□□□□ -0.21
USP11-208ENST00000480104 POLGP54098 1239 aaPredicted RBP13.76□□□□□ -0.21
USP11-208ENST00000480104 BCAR1P56945 870 aa13.76□□□□□ -0.21
USP11-208ENST00000480104 ZNF252P-AS1Q0IIN9 211 aa13.76□□□□□ -0.21
USP11-208ENST00000480104 CLLU1OSQ5K130 101 aa13.76□□□□□ -0.21
USP11-208ENST00000480104 GET4Q7L5D6 327 aaPredicted RBP13.76□□□□□ -0.21
USP11-208ENST00000480104 KBTBD3Q8NAB2 608 aa13.76□□□□□ -0.21
USP11-208ENST00000480104 INPP4AQ96PE3 977 aaPredicted RBP13.76□□□□□ -0.21
USP11-208ENST00000480104 BBC3Q96PG8 261 aaPredicted RBP13.76□□□□□ -0.21
USP11-208ENST00000480104 MAN1C1Q9NR34 630 aa13.76□□□□□ -0.21
USP11-208ENST00000480104 FAM217BQ9NTX9 383 aaPredicted RBP13.76□□□□□ -0.21
USP11-208ENST00000480104 RALGAPA1Q6GYQ0 2036 aa13.75□□□□□ -0.21
USP11-208ENST00000480104 CCDC195A0A1B0GUA6 201 aa13.75□□□□□ -0.21
USP11-208ENST00000480104 FIBPO43427 364 aa13.75□□□□□ -0.21
USP11-208ENST00000480104 INSRRP14616 1297 aa13.75□□□□□ -0.21
USP11-208ENST00000480104 KLRC2P26717 231 aa13.75□□□□□ -0.21
USP11-208ENST00000480104 ALDH7A1P49419 539 aaKnown RBP13.75□□□□□ -0.21
USP11-208ENST00000480104 NOVA1P51513 510 aaKnown RBP13.75□□□□□ -0.21
USP11-208ENST00000480104 MRPS9P82933 396 aaKnown RBP13.75□□□□□ -0.21
USP11-208ENST00000480104 SRSF5Q13243 272 aaKnown RBP13.75□□□□□ -0.21
USP11-208ENST00000480104 C12orf50Q8NA57 414 aaPredicted RBP13.75□□□□□ -0.21
USP11-208ENST00000480104 BCL7CQ8WUZ0 217 aaPredicted RBP13.75□□□□□ -0.21
USP11-208ENST00000480104 TRAPPC12Q8WVT3 735 aa13.75□□□□□ -0.21
USP11-208ENST00000480104 FGF14Q92915 247 aa13.75□□□□□ -0.21
USP11-208ENST00000480104 KLHL5Q96PQ7 755 aa13.75□□□□□ -0.21
USP11-208ENST00000480104 SCNM1Q9BWG6 230 aa13.75□□□□□ -0.21
USP11-208ENST00000480104 CDHR5Q9HBB8 845 aa13.75□□□□□ -0.21
USP11-208ENST00000480104 PCDHA2Q9Y5H9 948 aa13.75□□□□□ -0.21
USP11-208ENST00000480104 ZNF462Q96JM2 2506 aa13.74□□□□□ -0.21
USP11-208ENST00000480104 RRN3P2A6NIE6 340 aa13.74□□□□□ -0.21
USP11-208ENST00000480104 CNPP09543 421 aaKnown RBP13.74□□□□□ -0.21
USP11-208ENST00000480104 DSC3Q14574 896 aa13.74□□□□□ -0.21
USP11-208ENST00000480104 RRP12Q5JTH9 1297 aaKnown RBP13.74□□□□□ -0.21
USP11-208ENST00000480104 C19orf48Q6RUI8 117 aa13.74□□□□□ -0.21
USP11-208ENST00000480104 RSPO2Q6UXX9 243 aaPredicted RBP13.74□□□□□ -0.21
USP11-208ENST00000480104 FAM43BQ6ZT52 329 aaPredicted RBP13.74□□□□□ -0.21
USP11-208ENST00000480104 DDX53Q86TM3 631 aaKnown RBP13.74□□□□□ -0.21
USP11-208ENST00000480104 FCHSD1Q86WN1 690 aa13.74□□□□□ -0.21
USP11-208ENST00000480104 ITPRIPQ8IWB1 547 aa13.74□□□□□ -0.21
USP11-208ENST00000480104 RNF169Q8NCN4 708 aa13.74□□□□□ -0.21
USP11-208ENST00000480104 SMG7Q92540 1137 aaKnown RBP13.74□□□□□ -0.21
USP11-208ENST00000480104 SEC62Q99442 399 aaKnown RBP13.74□□□□□ -0.21
USP11-208ENST00000480104 RHOBTB2Q9BYZ6 727 aa13.74□□□□□ -0.21
USP11-208ENST00000480104 TOMM22Q9NS69 142 aa13.74□□□□□ -0.21
USP11-208ENST00000480104 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.74□□□□□ -0.21
USP11-208ENST00000480104 INPPL1O15357 1258 aa13.73□□□□□ -0.21
USP11-208ENST00000480104 FOXP2O15409 715 aa13.73□□□□□ -0.21
USP11-208ENST00000480104 HRO43593 1189 aa13.73□□□□□ -0.21
USP11-208ENST00000480104 DHX16O60231 1041 aaKnown RBP13.73□□□□□ -0.21
USP11-208ENST00000480104 RFPL2O75678 378 aa13.73□□□□□ -0.21
USP11-208ENST00000480104 MYBP10242 640 aa13.73□□□□□ -0.21
USP11-208ENST00000480104 FZD5Q13467 585 aa13.73□□□□□ -0.21
USP11-208ENST00000480104 PARM1Q6UWI2 310 aa13.73□□□□□ -0.21
USP11-208ENST00000480104 TPRG1Q6ZUI0 275 aa13.73□□□□□ -0.21
USP11-208ENST00000480104 ZNF707Q96C28 371 aaPredicted RBP13.73□□□□□ -0.21
USP11-208ENST00000480104 VN1R3Q9BXE9 311 aa13.73□□□□□ -0.21
USP11-208ENST00000480104 EMILIN2Q9BXX0 1053 aa13.73□□□□□ -0.21
USP11-208ENST00000480104 TCP11L1Q9NUJ3 509 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms