RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 ICAM3P32942 547 aa5.64□□□□□ -1.51
PTCD3-213ENST00000480102 ALDH5A1P51649 535 aaPredicted RBP5.64□□□□□ -1.51
PTCD3-213ENST00000480102 ARHGAP4P98171 946 aa5.64□□□□□ -1.51
PTCD3-213ENST00000480102 PTPN11Q06124 597 aaPredicted RBP5.64□□□□□ -1.51
PTCD3-213ENST00000480102 BAATQ14032 418 aaPredicted RBP5.64□□□□□ -1.51
PTCD3-213ENST00000480102 SETDB1Q15047 1291 aa5.64□□□□□ -1.51
PTCD3-213ENST00000480102 ANKRD1Q15327 319 aa5.64□□□□□ -1.51
PTCD3-213ENST00000480102 STXBP2Q15833 593 aa5.64□□□□□ -1.51
PTCD3-213ENST00000480102 WDR78Q5VTH9 848 aa5.64□□□□□ -1.51
PTCD3-213ENST00000480102 GALNT17Q6IS24 598 aa5.64□□□□□ -1.51
PTCD3-213ENST00000480102 TAPT1Q6NXT6 567 aa5.64□□□□□ -1.51
PTCD3-213ENST00000480102 CCDC62Q6P9F0 684 aa5.64□□□□□ -1.51
PTCD3-213ENST00000480102 BLOC1S2Q6QNY1 142 aa5.64□□□□□ -1.51
PTCD3-213ENST00000480102 TMTC3Q6ZXV5 915 aa5.64□□□□□ -1.51
PTCD3-213ENST00000480102 RUFY3Q7L099 469 aa5.64□□□□□ -1.51
PTCD3-213ENST00000480102 VSIG10LQ86VR7 867 aa5.64□□□□□ -1.51
PTCD3-213ENST00000480102 CCDC144CPQ8IYA2 1237 aa5.64□□□□□ -1.51
PTCD3-213ENST00000480102 SYTL5Q8TDW5 730 aaPredicted RBP5.64□□□□□ -1.51
PTCD3-213ENST00000480102 CCDC12Q8WUD4 166 aaPredicted RBP5.64□□□□□ -1.51
PTCD3-213ENST00000480102 RRP36Q96EU6 259 aaKnown RBP5.64□□□□□ -1.51
PTCD3-213ENST00000480102 CDHR1Q96JP9 859 aa5.64□□□□□ -1.51
PTCD3-213ENST00000480102 INPP4AQ96PE3 977 aaPredicted RBP5.64□□□□□ -1.51
PTCD3-213ENST00000480102 SENP7Q9BQF6 1050 aa5.64□□□□□ -1.51
PTCD3-213ENST00000480102 ZKSCAN3Q9BRR0 538 aa5.64□□□□□ -1.51
PTCD3-213ENST00000480102 C11orf49Q9H6J7 331 aa5.64□□□□□ -1.51
PTCD3-213ENST00000480102 SH3GLB2Q9NR46 395 aa5.64□□□□□ -1.51
PTCD3-213ENST00000480102 DZANK1Q9NVP4 752 aa5.64□□□□□ -1.51
PTCD3-213ENST00000480102 FOXD3Q9UJU5 478 aaPredicted RBP5.64□□□□□ -1.51
PTCD3-213ENST00000480102 PCDHA1Q9Y5I3 950 aa5.64□□□□□ -1.51
PTCD3-213ENST00000480102 SNX14Q9Y5W7 946 aa5.64□□□□□ -1.51
PTCD3-213ENST00000480102 ASTN1O14525 1302 aa5.64□□□□□ -1.51
PTCD3-213ENST00000480102 MROH7Q68CQ1 1323 aa5.64□□□□□ -1.51
PTCD3-213ENST00000480102 LAMA3Q16787 3333 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 ATAD5Q96QE3 1844 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 KBTBD13C9JR72 458 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 GCOM1H8Y6P7 765 aaPredicted RBP5.63□□□□□ -1.51
PTCD3-213ENST00000480102 EREGO14944 169 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 CTAGE5O15320 804 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 ZBTB43O43298 467 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 DHX16O60231 1041 aaKnown RBP5.63□□□□□ -1.51
PTCD3-213ENST00000480102 PEX10O60683 326 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 PPP1R11O60927 126 aaPredicted RBP5.63□□□□□ -1.51
PTCD3-213ENST00000480102 PGK2P07205 417 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 POLR2MP0CAP2 368 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 IFNAR1P17181 557 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 CDC27P30260 824 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 CCND3P30281 292 aaPredicted RBP5.63□□□□□ -1.51
PTCD3-213ENST00000480102 SLC16A2P36021 539 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 CPT1AP50416 773 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 CDK7P50613 346 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 AP3B2Q13367 1082 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 LRRC41Q15345 812 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 SLC35G1Q2M3R5 365 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 BRDTQ58F21 947 aaPredicted RBP5.63□□□□□ -1.51
PTCD3-213ENST00000480102 MUM1L1Q5H9M0 696 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 PCNX4Q63HM2 1172 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 NIPA1Q7RTP0 329 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 SESTD1Q86VW0 696 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 STK11IPQ8N1F8 1099 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 PAWRQ96IZ0 340 aaKnown RBP5.63□□□□□ -1.51
PTCD3-213ENST00000480102 POP1Q99575 1024 aaKnown RBP5.63□□□□□ -1.51
PTCD3-213ENST00000480102 PDCD2LQ9BRP1 358 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 RNF26Q9BY78 433 aaPredicted RBP5.63□□□□□ -1.51
PTCD3-213ENST00000480102 C22orf23Q9BZE7 217 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 ADAM19Q9H013 955 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 XPNPEP3Q9NQH7 507 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 BARHL2Q9NY43 387 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 SEC63Q9UGP8 760 aaKnown RBP5.63□□□□□ -1.51
PTCD3-213ENST00000480102 BRPF3Q9ULD4 1205 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 CYP46A1Q9Y6A2 500 aa5.63□□□□□ -1.51
PTCD3-213ENST00000480102 PTPDC1A2A3K4 754 aa5.62□□□□□ -1.51
PTCD3-213ENST00000480102 LINC01387J3KSC0 135 aa5.62□□□□□ -1.51
PTCD3-213ENST00000480102 MEIS2O14770 477 aa5.62□□□□□ -1.51
PTCD3-213ENST00000480102 PRPF3O43395 683 aaKnown RBP5.62□□□□□ -1.51
PTCD3-213ENST00000480102 NDUFB5O43674 189 aa5.62□□□□□ -1.51
PTCD3-213ENST00000480102 PARNO95453 639 aaKnown RBP5.62□□□□□ -1.51
PTCD3-213ENST00000480102 RPLP2P05387 115 aaKnown RBP5.62□□□□□ -1.51
PTCD3-213ENST00000480102 GOLGA8HP0CJ92 632 aa5.62□□□□□ -1.51
PTCD3-213ENST00000480102 EDN3P14138 238 aa5.62□□□□□ -1.51
PTCD3-213ENST00000480102 EPHA1P21709 976 aa5.62□□□□□ -1.51
PTCD3-213ENST00000480102 CNTN2Q02246 1040 aa5.62□□□□□ -1.51
PTCD3-213ENST00000480102 TNFAIP2Q03169 654 aa5.62□□□□□ -1.51
PTCD3-213ENST00000480102 RBL2Q08999 1139 aa5.62□□□□□ -1.51
PTCD3-213ENST00000480102 TTLL4Q14679 1199 aa5.62□□□□□ -1.51
PTCD3-213ENST00000480102 NTRK3Q16288 839 aa5.62□□□□□ -1.51
PTCD3-213ENST00000480102 RSPO4Q2I0M5 234 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-213ENST00000480102 ADCK5Q3MIX3 580 aa5.62□□□□□ -1.51
PTCD3-213ENST00000480102 CCDC144BQ3MJ40 725 aa5.62□□□□□ -1.51
PTCD3-213ENST00000480102 GNPTABQ3T906 1256 aa5.62□□□□□ -1.51
PTCD3-213ENST00000480102 NKAPLQ5M9Q1 402 aa5.62□□□□□ -1.51
PTCD3-213ENST00000480102 CCDC174Q6PII3 467 aa5.62□□□□□ -1.51
PTCD3-213ENST00000480102 TXNDC11Q6PKC3 985 aa5.62□□□□□ -1.51
PTCD3-213ENST00000480102 NSMFQ6X4W1 530 aa5.62□□□□□ -1.51
PTCD3-213ENST00000480102 SRBD1Q8N5C6 995 aaKnown RBP5.62□□□□□ -1.51
PTCD3-213ENST00000480102 GIMAP8Q8ND71 665 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-213ENST00000480102 GPRASP2Q96D09 838 aa5.62□□□□□ -1.51
PTCD3-213ENST00000480102 GLT1D1Q96MS3 346 aa5.62□□□□□ -1.51
PTCD3-213ENST00000480102 RMDN3Q96TC7 470 aa5.62□□□□□ -1.51
PTCD3-213ENST00000480102 GDF15Q99988 308 aa5.62□□□□□ -1.51
PTCD3-213ENST00000480102 UBA5Q9GZZ9 404 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms