RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 CCDC127Q96BQ5 260 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 JMJD4Q9H9V9 463 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 C1orf112Q9NSG2 853 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 MTUS1Q9ULD2 1270 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 PTCH2Q9Y6C5 1203 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 C4BP0C0L5 1744 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 A0A0G2JLL6 359 aaPredicted RBP6.48□□□□□ -1.37
CPS1-207ENST00000479988 RSPH10B2B2RC85 870 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 MEIS1O00470 390 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 SEPT4O43236 478 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 GAS2O43903 313 aaKnown RBP6.48□□□□□ -1.37
CPS1-207ENST00000479988 RSPH10BP0C881 870 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 KRT9P35527 623 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 RFC5P40937 340 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 COL9A3Q14050 684 aaPredicted RBP6.48□□□□□ -1.37
CPS1-207ENST00000479988 PRRT2Q7Z6L0 340 aaPredicted RBP6.48□□□□□ -1.37
CPS1-207ENST00000479988 BANK1Q8NDB2 785 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 RDM1Q8NG50 284 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 EPSTI1Q96J88 318 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 COLEC11Q9BWP8 271 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 PLVAPQ9BX97 442 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 TSGA10Q9BZW7 698 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 HIPK3Q9H422 1215 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 PANK4Q9NVE7 773 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.48□□□□□ -1.37
CPS1-207ENST00000479988 SLC8A2Q9UPR5 921 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 STRCP1A6NGW2 1772 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 KCNJ18B7U540 433 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 DGAT1O75907 488 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 KCNA3P22001 575 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 PSEN2P49810 448 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 MAPK8IP2Q13387 824 aaPredicted RBP6.48□□□□□ -1.37
CPS1-207ENST00000479988 KCNJ12Q14500 433 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 HSP90AA4PQ58FG1 418 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 TREML2Q5T2D2 321 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 NT5DC1Q5TFE4 455 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 NSMCE1Q8WV22 266 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 LARP4BQ92615 738 aaKnown RBP6.48□□□□□ -1.37
CPS1-207ENST00000479988 ALS2CR12Q96Q35 445 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 MXRA8Q9BRK3 442 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 MSTO1Q9BUK6 570 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 MRPL4Q9BYD3 311 aaKnown RBP6.48□□□□□ -1.37
CPS1-207ENST00000479988 BHMT2Q9H2M3 363 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 THAP9Q9H5L6 903 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 A1CFQ9NQ94 594 aaKnown RBP6.48□□□□□ -1.37
CPS1-207ENST00000479988 STIM2Q9P246 746 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 WTIPA6NIX2 430 aaPredicted RBP6.48□□□□□ -1.37
CPS1-207ENST00000479988 N4BP1O75113 896 aaKnown RBP6.48□□□□□ -1.37
CPS1-207ENST00000479988 FGBP02675 491 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 URODP06132 367 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 COPB1P53618 953 aaKnown RBP6.48□□□□□ -1.37
CPS1-207ENST00000479988 PEX3P56589 373 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 TMEM62Q0P6H9 643 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 MFSD10Q14728 455 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 GRIK5Q16478 980 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 CCDC144BQ3MJ40 725 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 PADI6Q6TGC4 694 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 RIT2Q99578 217 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 VPS16Q9H269 839 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 KCNF1Q9H3M0 494 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 PPP2R2CQ9Y2T4 447 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 UBR2Q8IWV8 1755 aa6.48□□□□□ -1.37
CPS1-207ENST00000479988 PVALEFA0A1B0GWK0 134 aa6.47□□□□□ -1.37
CPS1-207ENST00000479988 PRRG1O14668 218 aa6.47□□□□□ -1.37
CPS1-207ENST00000479988 CCNE1P24864 410 aa6.47□□□□□ -1.37
CPS1-207ENST00000479988 TOB1P50616 345 aaPredicted RBP6.47□□□□□ -1.37
CPS1-207ENST00000479988 CCL23P55773 120 aa6.47□□□□□ -1.37
CPS1-207ENST00000479988 KIF5AQ12840 1032 aa6.47□□□□□ -1.37
CPS1-207ENST00000479988 CCDC42Q96M95 316 aa6.47□□□□□ -1.37
CPS1-207ENST00000479988 LXNQ9BS40 222 aa6.47□□□□□ -1.37
CPS1-207ENST00000479988 NOC4LQ9BVI4 516 aaKnown RBP6.47□□□□□ -1.37
CPS1-207ENST00000479988 ZMYND12Q9H0C1 365 aa6.47□□□□□ -1.37
CPS1-207ENST00000479988 SLC38A10Q9HBR0 1119 aa6.47□□□□□ -1.37
CPS1-207ENST00000479988 SLC38A7Q9NVC3 462 aa6.47□□□□□ -1.37
CPS1-207ENST00000479988 OGFRQ9NZT2 677 aa6.47□□□□□ -1.37
CPS1-207ENST00000479988 AFG3L2Q9Y4W6 797 aa6.47□□□□□ -1.37
CPS1-207ENST00000479988 MOXD2PA6NHM9 499 aa6.47□□□□□ -1.37
CPS1-207ENST00000479988 TPD52L2O43399 206 aaKnown RBP6.47□□□□□ -1.37
CPS1-207ENST00000479988 ACTN4O43707 911 aaKnown RBP6.47□□□□□ -1.37
CPS1-207ENST00000479988 TLL1O43897 1013 aa6.47□□□□□ -1.37
CPS1-207ENST00000479988 HUS1O60921 280 aa6.47□□□□□ -1.37
CPS1-207ENST00000479988 PAFAH1B1P43034 410 aa6.47□□□□□ -1.37
CPS1-207ENST00000479988 HIRAP54198 1017 aaPredicted RBP6.47□□□□□ -1.37
CPS1-207ENST00000479988 BEX3Q00994 111 aa6.47□□□□□ -1.37
CPS1-207ENST00000479988 IFI16Q16666 785 aaKnown RBP6.47□□□□□ -1.37
CPS1-207ENST00000479988 PAN2Q504Q3 1202 aaKnown RBP6.47□□□□□ -1.37
CPS1-207ENST00000479988 CES5AQ6NT32 575 aa6.47□□□□□ -1.37
CPS1-207ENST00000479988 PSRC1Q6PGN9 363 aaPredicted RBP6.47□□□□□ -1.37
CPS1-207ENST00000479988 ABRAQ8N0Z2 381 aa6.47□□□□□ -1.37
CPS1-207ENST00000479988 KRT222Q8N1A0 295 aa6.47□□□□□ -1.37
CPS1-207ENST00000479988 NEK11Q8NG66 645 aa6.47□□□□□ -1.37
CPS1-207ENST00000479988 U2AF1L4Q8WU68 220 aaKnown RBP6.47□□□□□ -1.37
CPS1-207ENST00000479988 ZNF668Q96K58 619 aaPredicted RBP6.47□□□□□ -1.37
CPS1-207ENST00000479988 PPP1R13BQ96KQ4 1090 aa6.47□□□□□ -1.37
CPS1-207ENST00000479988 PDCD2LQ9BRP1 358 aa6.47□□□□□ -1.37
CPS1-207ENST00000479988 MRPL9Q9BYD2 267 aaKnown RBP6.47□□□□□ -1.37
CPS1-207ENST00000479988 MFSD1Q9H3U5 465 aa6.47□□□□□ -1.37
CPS1-207ENST00000479988 ST7Q9NRC1 585 aa6.47□□□□□ -1.37
CPS1-207ENST00000479988 KCND1Q9NSA2 647 aa6.47□□□□□ -1.37
CPS1-207ENST00000479988 CTAGE15A4D2H0 777 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms