RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 GGNQ86UU5 652 aa7.54□□□□□ -1.2
COMMD3-212ENST00000479958 GNRHR2Q96P88 292 aa7.54□□□□□ -1.2
COMMD3-212ENST00000479958 OR10A2Q9H208 303 aa7.54□□□□□ -1.2
COMMD3-212ENST00000479958 MSL2Q9HCI7 577 aa7.54□□□□□ -1.2
COMMD3-212ENST00000479958 PUF60Q9UHX1 559 aaKnown RBP7.54□□□□□ -1.2
COMMD3-212ENST00000479958 EPRSP07814 1512 aaKnown RBP7.54□□□□□ -1.2
COMMD3-212ENST00000479958 CBX4O00257 560 aa7.53□□□□□ -1.2
COMMD3-212ENST00000479958 ARHGAP6O43182 974 aa7.53□□□□□ -1.2
COMMD3-212ENST00000479958 NFYCQ13952 458 aa7.53□□□□□ -1.2
COMMD3-212ENST00000479958 PCOLCEQ15113 449 aa7.53□□□□□ -1.2
COMMD3-212ENST00000479958 RNF151Q2KHN1 245 aa7.53□□□□□ -1.2
COMMD3-212ENST00000479958 FILIP1Q7Z7B0 1213 aa7.53□□□□□ -1.2
COMMD3-212ENST00000479958 CD248Q9HCU0 757 aa7.53□□□□□ -1.2
COMMD3-212ENST00000479958 ZFR2Q9UPR6 939 aaKnown RBP7.53□□□□□ -1.2
COMMD3-212ENST00000479958 TSC22D4Q9Y3Q8 395 aa7.53□□□□□ -1.2
COMMD3-212ENST00000479958 RRBP1Q9P2E9 1410 aaKnown RBP7.53□□□□□ -1.2
COMMD3-212ENST00000479958 NUP153P49790 1475 aaKnown RBP7.53□□□□□ -1.2
COMMD3-212ENST00000479958 MAFGO15525 162 aa7.52□□□□□ -1.2
COMMD3-212ENST00000479958 MAFO75444 373 aaPredicted RBP7.52□□□□□ -1.2
COMMD3-212ENST00000479958 MRE11P49959 708 aa7.52□□□□□ -1.2
COMMD3-212ENST00000479958 NEK4P51957 841 aa7.52□□□□□ -1.2
COMMD3-212ENST00000479958 SESN2P58004 480 aaPredicted RBP7.52□□□□□ -1.2
COMMD3-212ENST00000479958 KRTAP10-2P60368 255 aa7.52□□□□□ -1.2
COMMD3-212ENST00000479958 ADCY1Q08828 1119 aa7.52□□□□□ -1.2
COMMD3-212ENST00000479958 TTC38Q5R3I4 469 aa7.52□□□□□ -1.2
COMMD3-212ENST00000479958 AGBL4Q5VU57 503 aa7.52□□□□□ -1.2
COMMD3-212ENST00000479958 TCTN3Q6NUS6 607 aa7.52□□□□□ -1.2
COMMD3-212ENST00000479958 LARP4Q71RC2 724 aaKnown RBP eCLIP7.52□□□□□ -1.2
COMMD3-212ENST00000479958 KIF18BQ86Y91 864 aa7.52□□□□□ -1.2
COMMD3-212ENST00000479958 KIAA1958Q8N8K9 716 aa7.52□□□□□ -1.2
COMMD3-212ENST00000479958 Q8TCH9 128 aa7.52□□□□□ -1.2
COMMD3-212ENST00000479958 FOXRED1Q96CU9 486 aaPredicted RBP7.52□□□□□ -1.2
COMMD3-212ENST00000479958 MAML3Q96JK9 1138 aa7.52□□□□□ -1.2
COMMD3-212ENST00000479958 FANCLQ9NW38 375 aa7.52□□□□□ -1.2
COMMD3-212ENST00000479958 FAM184BQ9ULE4 1060 aa7.52□□□□□ -1.2
COMMD3-212ENST00000479958 VWA7Q9Y334 891 aa7.52□□□□□ -1.2
COMMD3-212ENST00000479958 HECW1Q76N89 1606 aa7.52□□□□□ -1.21
COMMD3-212ENST00000479958 RAPGEF6Q8TEU7 1601 aa7.52□□□□□ -1.21
COMMD3-212ENST00000479958 CLASP1Q7Z460 1538 aa7.52□□□□□ -1.21
COMMD3-212ENST00000479958 MTUS2Q5JR59 1369 aa7.52□□□□□ -1.21
COMMD3-212ENST00000479958 CCNB3Q8WWL7 1395 aa7.52□□□□□ -1.21
COMMD3-212ENST00000479958 CDC14BO60729 498 aa7.52□□□□□ -1.21
COMMD3-212ENST00000479958 SELENOPP49908 381 aa7.52□□□□□ -1.21
COMMD3-212ENST00000479958 SLC6A3Q01959 620 aa7.52□□□□□ -1.21
COMMD3-212ENST00000479958 NOLC1Q14978 699 aaKnown RBP eCLIP7.52□□□□□ -1.21
COMMD3-212ENST00000479958 ZNF585AQ6P3V2 769 aa7.52□□□□□ -1.21
COMMD3-212ENST00000479958 RTN4RL1Q86UN2 441 aaPredicted RBP7.52□□□□□ -1.21
COMMD3-212ENST00000479958 SAE1Q9UBE0 346 aaPredicted RBP7.52□□□□□ -1.21
COMMD3-212ENST00000479958 OAZ3Q9UMX2 235 aa7.52□□□□□ -1.21
COMMD3-212ENST00000479958 CD2APQ9Y5K6 639 aa7.52□□□□□ -1.21
COMMD3-212ENST00000479958 SHROOM2Q13796 1616 aa7.51□□□□□ -1.21
COMMD3-212ENST00000479958 PTPRGP23470 1445 aa7.51□□□□□ -1.21
COMMD3-212ENST00000479958 UBA6A0AVT1 1052 aaPredicted RBP7.51□□□□□ -1.21
COMMD3-212ENST00000479958 DVL2O14641 736 aa7.51□□□□□ -1.21
COMMD3-212ENST00000479958 GAS7O60861 476 aa7.51□□□□□ -1.21
COMMD3-212ENST00000479958 H2AFYO75367 372 aaKnown RBP7.51□□□□□ -1.21
COMMD3-212ENST00000479958 RPS19P39019 145 aaKnown RBP7.51□□□□□ -1.21
COMMD3-212ENST00000479958 FAM50AQ14320 339 aaKnown RBP7.51□□□□□ -1.21
COMMD3-212ENST00000479958 TIGD7Q6NT04 549 aaPredicted RBP7.51□□□□□ -1.21
COMMD3-212ENST00000479958 PASD1Q8IV76 773 aa7.51□□□□□ -1.21
COMMD3-212ENST00000479958 NINJ1Q92982 152 aa7.51□□□□□ -1.21
COMMD3-212ENST00000479958 LPPQ93052 612 aa7.51□□□□□ -1.21
COMMD3-212ENST00000479958 TUBGCP5Q96RT8 1024 aa7.51□□□□□ -1.21
COMMD3-212ENST00000479958 MUSKO15146 869 aa7.5□□□□□ -1.21
COMMD3-212ENST00000479958 FOXS1O43638 330 aa7.5□□□□□ -1.21
COMMD3-212ENST00000479958 CDC45O75419 566 aa7.5□□□□□ -1.21
COMMD3-212ENST00000479958 EPHA7Q15375 998 aa7.5□□□□□ -1.21
COMMD3-212ENST00000479958 C21orf62-AS1Q17RA5 79 aa7.5□□□□□ -1.21
COMMD3-212ENST00000479958 SLFN12LQ6IEE8 588 aa7.5□□□□□ -1.21
COMMD3-212ENST00000479958 ZZZ3Q8IYH5 903 aa7.5□□□□□ -1.21
COMMD3-212ENST00000479958 AHI1Q8N157 1196 aa7.5□□□□□ -1.21
COMMD3-212ENST00000479958 RPGRQ92834 1020 aaKnown RBP7.5□□□□□ -1.21
COMMD3-212ENST00000479958 GFM2Q969S9 779 aaKnown RBP7.5□□□□□ -1.21
COMMD3-212ENST00000479958 ORAI3Q9BRQ5 295 aa7.5□□□□□ -1.21
COMMD3-212ENST00000479958 KRTAP3-1Q9BYR8 98 aa7.5□□□□□ -1.21
COMMD3-212ENST00000479958 KIAA1683Q9H0B3 1180 aa7.5□□□□□ -1.21
COMMD3-212ENST00000479958 NELFAQ9H3P2 528 aa7.5□□□□□ -1.21
COMMD3-212ENST00000479958 TESMINQ9Y4I5 508 aa7.5□□□□□ -1.21
COMMD3-212ENST00000479958 SPO11Q9Y5K1 396 aa7.5□□□□□ -1.21
COMMD3-212ENST00000479958 NCOA2Q15596 1464 aa7.49□□□□□ -1.21
COMMD3-212ENST00000479958 ABCA8O94911 1581 aa7.49□□□□□ -1.21
COMMD3-212ENST00000479958 SLC9A1P19634 815 aa7.49□□□□□ -1.21
COMMD3-212ENST00000479958 STAT5BP51692 787 aa7.49□□□□□ -1.21
COMMD3-212ENST00000479958 BCAR1P56945 870 aa7.49□□□□□ -1.21
COMMD3-212ENST00000479958 DGKDQ16760 1214 aa7.49□□□□□ -1.21
COMMD3-212ENST00000479958 CNNM4Q6P4Q7 775 aa7.49□□□□□ -1.21
COMMD3-212ENST00000479958 KLHDC10Q6PID8 442 aa7.49□□□□□ -1.21
COMMD3-212ENST00000479958 SH3RF3Q8TEJ3 882 aaPredicted RBP7.49□□□□□ -1.21
COMMD3-212ENST00000479958 C16orf92Q96LL3 132 aa7.49□□□□□ -1.21
COMMD3-212ENST00000479958 SYNPO2Q9UMS6 1093 aa7.49□□□□□ -1.21
COMMD3-212ENST00000479958 CCDC18Q5T9S5 1454 aa7.49□□□□□ -1.21
COMMD3-212ENST00000479958 RAD17O75943 681 aa7.48□□□□□ -1.21
COMMD3-212ENST00000479958 PRLP01236 227 aa7.48□□□□□ -1.21
COMMD3-212ENST00000479958 POU3F2P20265 443 aaPredicted RBP7.48□□□□□ -1.21
COMMD3-212ENST00000479958 COMTP21964 271 aa7.48□□□□□ -1.21
COMMD3-212ENST00000479958 RGS3P49796 1198 aa7.48□□□□□ -1.21
COMMD3-212ENST00000479958 SART3Q15020 963 aaKnown RBP7.48□□□□□ -1.21
COMMD3-212ENST00000479958 PRKD1Q15139 912 aaPredicted RBP7.48□□□□□ -1.21
COMMD3-212ENST00000479958 TBR1Q16650 682 aa7.48□□□□□ -1.21
COMMD3-212ENST00000479958 POLNQ7Z5Q5 900 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms