RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 KCNT2Q6UVM3 1135 aa11.11□□□□□ -0.63
GPNMB-211ENST00000479625 SLC24A5Q71RS6 500 aa11.11□□□□□ -0.63
GPNMB-211ENST00000479625 DGLUCYQ7Z3D6 616 aa11.11□□□□□ -0.63
GPNMB-211ENST00000479625 FAM228AQ86W67 206 aa11.11□□□□□ -0.63
GPNMB-211ENST00000479625 TICAM2Q86XR7 235 aa11.11□□□□□ -0.63
GPNMB-211ENST00000479625 KIAA2013Q8IYS2 634 aa11.11□□□□□ -0.63
GPNMB-211ENST00000479625 CUL5Q93034 780 aa11.11□□□□□ -0.63
GPNMB-211ENST00000479625 ATP6V0A4Q9HBG4 840 aa11.11□□□□□ -0.63
GPNMB-211ENST00000479625 JPH1Q9HDC5 661 aaPredicted RBP11.11□□□□□ -0.63
GPNMB-211ENST00000479625 NGRNQ9NPE2 291 aaKnown RBP11.11□□□□□ -0.63
GPNMB-211ENST00000479625 C1orf112Q9NSG2 853 aa11.11□□□□□ -0.63
GPNMB-211ENST00000479625 DIAPH3Q9NSV4 1193 aa11.11□□□□□ -0.63
GPNMB-211ENST00000479625 KIAA1468Q9P260 1216 aa11.11□□□□□ -0.63
GPNMB-211ENST00000479625 ST3GAL5Q9UNP4 418 aa11.11□□□□□ -0.63
GPNMB-211ENST00000479625 UBIAD1Q9Y5Z9 338 aa11.11□□□□□ -0.63
GPNMB-211ENST00000479625 R4GN57 208 aa11.11□□□□□ -0.63
GPNMB-211ENST00000479625 CEP250Q9BV73 2442 aa11.11□□□□□ -0.63
GPNMB-211ENST00000479625 COL4A3Q01955 1670 aa11.11□□□□□ -0.63
GPNMB-211ENST00000479625 C2orf71A6NGG8 1288 aa11.1□□□□□ -0.63
GPNMB-211ENST00000479625 PIK3CDO00329 1044 aa11.1□□□□□ -0.63
GPNMB-211ENST00000479625 CLASP2O75122 1294 aaKnown RBP11.1□□□□□ -0.63
GPNMB-211ENST00000479625 MTHFRP42898 656 aa11.1□□□□□ -0.63
GPNMB-211ENST00000479625 ACTR2P61160 394 aa11.1□□□□□ -0.63
GPNMB-211ENST00000479625 ITIH3Q06033 890 aa11.1□□□□□ -0.63
GPNMB-211ENST00000479625 SMC1AQ14683 1233 aaKnown RBP11.1□□□□□ -0.63
GPNMB-211ENST00000479625 KIAA1841Q6NSI8 718 aa11.1□□□□□ -0.63
GPNMB-211ENST00000479625 ZDHHC14Q8IZN3 488 aa11.1□□□□□ -0.63
GPNMB-211ENST00000479625 DTWD2Q8NBA8 298 aa11.1□□□□□ -0.63
GPNMB-211ENST00000479625 KCNG4Q8TDN1 519 aa11.1□□□□□ -0.63
GPNMB-211ENST00000479625 AUTS2Q8WXX7 1259 aa11.1□□□□□ -0.63
GPNMB-211ENST00000479625 CDHR1Q96JP9 859 aa11.1□□□□□ -0.63
GPNMB-211ENST00000479625 ZNF558Q96NG5 402 aa11.1□□□□□ -0.63
GPNMB-211ENST00000479625 CASD1Q96PB1 797 aa11.1□□□□□ -0.63
GPNMB-211ENST00000479625 OSMRQ99650 979 aa11.1□□□□□ -0.63
GPNMB-211ENST00000479625 MYL10Q9BUA6 226 aa11.1□□□□□ -0.63
GPNMB-211ENST00000479625 AZI2Q9H6S1 392 aa11.1□□□□□ -0.63
GPNMB-211ENST00000479625 TMEM161AQ9NX61 479 aa11.1□□□□□ -0.63
GPNMB-211ENST00000479625 SLC9A2Q9UBY0 812 aa11.1□□□□□ -0.63
GPNMB-211ENST00000479625 PUF60Q9UHX1 559 aaKnown RBP11.1□□□□□ -0.63
GPNMB-211ENST00000479625 DBR1Q9UK59 544 aaKnown RBP11.1□□□□□ -0.63
GPNMB-211ENST00000479625 TAF6LQ9Y6J9 622 aa11.1□□□□□ -0.63
GPNMB-211ENST00000479625 IFIT3O14879 490 aaKnown RBP11.09□□□□□ -0.63
GPNMB-211ENST00000479625 EPCAMP16422 314 aa11.09□□□□□ -0.63
GPNMB-211ENST00000479625 KLRC1P26715 233 aa11.09□□□□□ -0.63
GPNMB-211ENST00000479625 DSC3Q14574 896 aa11.09□□□□□ -0.63
GPNMB-211ENST00000479625 KIZQ2M2Z5 673 aa11.09□□□□□ -0.63
GPNMB-211ENST00000479625 SIX5Q8N196 739 aa11.09□□□□□ -0.63
GPNMB-211ENST00000479625 CMTR1Q8N1G2 835 aaKnown RBP11.09□□□□□ -0.63
GPNMB-211ENST00000479625 LRRC43Q8N309 656 aa11.09□□□□□ -0.63
GPNMB-211ENST00000479625 CNTNAP3BQ96NU0 1288 aa11.09□□□□□ -0.63
GPNMB-211ENST00000479625 CNTNAP3Q9BZ76 1288 aa11.09□□□□□ -0.63
GPNMB-211ENST00000479625 TMEM117Q9H0C3 514 aa11.09□□□□□ -0.63
GPNMB-211ENST00000479625 JADE2Q9NQC1 790 aa11.09□□□□□ -0.63
GPNMB-211ENST00000479625 MYH15Q9Y2K3 1946 aa11.09□□□□□ -0.63
GPNMB-211ENST00000479625 OTOGLQ3ZCN5 2332 aa11.08□□□□□ -0.64
GPNMB-211ENST00000479625 CFAP47Q6ZTR5 3102 aa11.08□□□□□ -0.64
GPNMB-211ENST00000479625 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.08□□□□□ -0.64
GPNMB-211ENST00000479625 NT5C1B-RDH14C9J2C7 533 aa11.08□□□□□ -0.64
GPNMB-211ENST00000479625 NARSO43776 548 aaKnown RBP11.08□□□□□ -0.64
GPNMB-211ENST00000479625 PLEKHA8P1O95397 391 aa11.08□□□□□ -0.64
GPNMB-211ENST00000479625 EOMESO95936 686 aa11.08□□□□□ -0.64
GPNMB-211ENST00000479625 VTNP04004 478 aa11.08□□□□□ -0.64
GPNMB-211ENST00000479625 PPM1AP35813 382 aa11.08□□□□□ -0.64
GPNMB-211ENST00000479625 METAP2P50579 478 aaKnown RBP eCLIP11.08□□□□□ -0.64
GPNMB-211ENST00000479625 STAT5BP51692 787 aa11.08□□□□□ -0.64
GPNMB-211ENST00000479625 ITGB3BPQ13352 177 aaPredicted RBP11.08□□□□□ -0.64
GPNMB-211ENST00000479625 WTAPQ15007 396 aa11.08□□□□□ -0.64
GPNMB-211ENST00000479625 CLLU1OSQ5K130 101 aa11.08□□□□□ -0.64
GPNMB-211ENST00000479625 TMC5Q6UXY8 1006 aa11.08□□□□□ -0.64
GPNMB-211ENST00000479625 KIAA0319LQ8IZA0 1049 aa11.08□□□□□ -0.64
GPNMB-211ENST00000479625 SLC39A11Q8N1S5 342 aa11.08□□□□□ -0.64
GPNMB-211ENST00000479625 NME8Q8N427 588 aa11.08□□□□□ -0.64
GPNMB-211ENST00000479625 MRPL43Q8N983 215 aaKnown RBP11.08□□□□□ -0.64
GPNMB-211ENST00000479625 RNF169Q8NCN4 708 aa11.08□□□□□ -0.64
GPNMB-211ENST00000479625 ANKK1Q8NFD2 765 aa11.08□□□□□ -0.64
GPNMB-211ENST00000479625 CYP2W1Q8TAV3 490 aa11.08□□□□□ -0.64
GPNMB-211ENST00000479625 RIN2Q8WYP3 895 aaPredicted RBP11.08□□□□□ -0.64
GPNMB-211ENST00000479625 RRP36Q96EU6 259 aaKnown RBP11.08□□□□□ -0.64
GPNMB-211ENST00000479625 PGBD1Q96JS3 809 aa11.08□□□□□ -0.64
GPNMB-211ENST00000479625 SPZ1Q9BXG8 430 aa11.08□□□□□ -0.64
GPNMB-211ENST00000479625 KCNH7Q9NS40 1196 aa11.08□□□□□ -0.64
GPNMB-211ENST00000479625 SPG21Q9NZD8 308 aa11.08□□□□□ -0.64
GPNMB-211ENST00000479625 DUSP12Q9UNI6 340 aa11.08□□□□□ -0.64
GPNMB-211ENST00000479625 DOCK8Q8NF50 2099 aa11.08□□□□□ -0.64
GPNMB-211ENST00000479625 hCG_1642624A0A1W2PR95 340 aa11.07□□□□□ -0.64
GPNMB-211ENST00000479625 DDX39AO00148 427 aaKnown RBP11.07□□□□□ -0.64
GPNMB-211ENST00000479625 GPR182O15218 404 aa11.07□□□□□ -0.64
GPNMB-211ENST00000479625 LMNAP02545 664 aaKnown RBP11.07□□□□□ -0.64
GPNMB-211ENST00000479625 ANTXR2P58335 489 aa11.07□□□□□ -0.64
GPNMB-211ENST00000479625 FAM189BP81408 668 aa11.07□□□□□ -0.64
GPNMB-211ENST00000479625 KRT17Q04695 432 aa11.07□□□□□ -0.64
GPNMB-211ENST00000479625 B4GALNT3Q6L9W6 998 aa11.07□□□□□ -0.64
GPNMB-211ENST00000479625 PLPPR4Q7Z2D5 763 aa11.07□□□□□ -0.64
GPNMB-211ENST00000479625 TMEM173Q86WV6 379 aaPredicted RBP11.07□□□□□ -0.64
GPNMB-211ENST00000479625 CCDC60Q8IWA6 550 aaPredicted RBP11.07□□□□□ -0.64
GPNMB-211ENST00000479625 ABI1Q8IZP0 508 aa11.07□□□□□ -0.64
GPNMB-211ENST00000479625 DCLK2Q8N568 766 aa11.07□□□□□ -0.64
GPNMB-211ENST00000479625 HINFPQ9BQA5 517 aa11.07□□□□□ -0.64
GPNMB-211ENST00000479625 ELAC1Q9H777 363 aaKnown RBP11.07□□□□□ -0.64
GPNMB-211ENST00000479625 CYP26B1Q9NR63 512 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms