RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 RNF19AQ9NV58 838 aa15.05■□□□□ -0
ABCF1-206ENST00000479542 PER2O15055 1255 aa15.04■□□□□ -0
ABCF1-206ENST00000479542 VTNP04004 478 aa15.04■□□□□ -0
ABCF1-206ENST00000479542 METAP2P50579 478 aaKnown RBP eCLIP15.04■□□□□ -08e-6■■□□□ 13.7
ABCF1-206ENST00000479542 EVCP57679 992 aa15.04■□□□□ -0
ABCF1-206ENST00000479542 NLRP11P59045 1033 aaKnown RBP15.04■□□□□ -0
ABCF1-206ENST00000479542 ITIH3Q06033 890 aa15.04■□□□□ -0
ABCF1-206ENST00000479542 BMS1Q14692 1282 aaKnown RBP15.04■□□□□ -0
ABCF1-206ENST00000479542 SYCE2Q6PIF2 218 aa15.04■□□□□ -0
ABCF1-206ENST00000479542 LRRC55Q6ZSA7 311 aa15.04■□□□□ -0
ABCF1-206ENST00000479542 ZNF598Q86UK7 904 aaKnown RBP15.04■□□□□ -0
ABCF1-206ENST00000479542 SUGP1Q8IWZ8 645 aaKnown RBP15.04■□□□□ -0
ABCF1-206ENST00000479542 METTL13Q8N6R0 699 aa15.04■□□□□ -0
ABCF1-206ENST00000479542 MRPL43Q8N983 215 aaKnown RBP15.04■□□□□ -0
ABCF1-206ENST00000479542 CCDC148Q8NFR7 591 aa15.04■□□□□ -0
ABCF1-206ENST00000479542 ASIC4Q96FT7 647 aa15.04■□□□□ -0
ABCF1-206ENST00000479542 RNF26Q9BY78 433 aaPredicted RBP15.04■□□□□ -0
ABCF1-206ENST00000479542 C22orf23Q9BZE7 217 aa15.04■□□□□ -0
ABCF1-206ENST00000479542 SH3GLB2Q9NR46 395 aa15.04■□□□□ -0
ABCF1-206ENST00000479542 DACT1Q9NYF0 836 aa15.04■□□□□ -0
ABCF1-206ENST00000479542 SPG21Q9NZD8 308 aa15.04■□□□□ -0
ABCF1-206ENST00000479542 GABBR1Q9UBS5 961 aa15.04■□□□□ -0
ABCF1-206ENST00000479542 IRAK3Q9Y616 596 aa15.04■□□□□ -0
ABCF1-206ENST00000479542 ZNF862O60290 1169 aa15.03■□□□□ -0
ABCF1-206ENST00000479542 FGFR1P11362 822 aa15.03■□□□□ -0
ABCF1-206ENST00000479542 DARSP14868 501 aaKnown RBP15.03■□□□□ -0
ABCF1-206ENST00000479542 TARBP2Q15633 366 aaKnown RBP15.03■□□□□ -0
ABCF1-206ENST00000479542 NTRK3Q16288 839 aa15.03■□□□□ -0
ABCF1-206ENST00000479542 PTPN21Q16825 1174 aa15.03■□□□□ -0
ABCF1-206ENST00000479542 TPRNQ4KMQ1 711 aa15.03■□□□□ -0
ABCF1-206ENST00000479542 ABI1Q8IZP0 508 aa15.03■□□□□ -0
ABCF1-206ENST00000479542 CASP10Q92851 521 aa15.03■□□□□ -0
ABCF1-206ENST00000479542 NECTIN4Q96NY8 510 aa15.03■□□□□ -0
ABCF1-206ENST00000479542 TCF25Q9BQ70 676 aa15.03■□□□□ -0
ABCF1-206ENST00000479542 MRPL9Q9BYD2 267 aaKnown RBP15.03■□□□□ -0
ABCF1-206ENST00000479542 DISC1Q9NRI5 854 aa15.03■□□□□ -0
ABCF1-206ENST00000479542 NR2E1Q9Y466 385 aa15.03■□□□□ -0
ABCF1-206ENST00000479542 PCDHGC5Q9Y5F6 944 aa15.03■□□□□ -0
ABCF1-206ENST00000479542 ZDBF2Q9HCK1 2354 aa15.03■□□□□ -0
ABCF1-206ENST00000479542 EDIL3O43854 480 aa15.02■□□□□ -0
ABCF1-206ENST00000479542 OATP04181 439 aa15.02■□□□□ -0
ABCF1-206ENST00000479542 IFNAR1P17181 557 aa15.02■□□□□ -0
ABCF1-206ENST00000479542 GPC3P51654 580 aa15.02■□□□□ -0
ABCF1-206ENST00000479542 JAK3P52333 1124 aa15.02■□□□□ -0
ABCF1-206ENST00000479542 GIT2Q14161 759 aa15.02■□□□□ -0
ABCF1-206ENST00000479542 PRR16Q569H4 304 aa15.02■□□□□ -0
ABCF1-206ENST00000479542 SLC39A11Q8N1S5 342 aa15.02■□□□□ -0
ABCF1-206ENST00000479542 PRSS33Q8NF86 280 aa15.02■□□□□ -0
ABCF1-206ENST00000479542 SLC5A5Q92911 643 aa15.02■□□□□ -0
ABCF1-206ENST00000479542 RPGRIP1Q96KN7 1286 aa15.02■□□□□ -0
ABCF1-206ENST00000479542 TCEANC2Q96MN5 208 aa15.02■□□□□ -0
ABCF1-206ENST00000479542 NIFKQ9BYG3 293 aaKnown RBP15.02■□□□□ -0
ABCF1-206ENST00000479542 ADAM7Q9H2U9 754 aa15.02■□□□□ -0
ABCF1-206ENST00000479542 STK39Q9UEW8 545 aa15.02■□□□□ -0
ABCF1-206ENST00000479542 AKT3Q9Y243 479 aa15.02■□□□□ -0
ABCF1-206ENST00000479542 CYP3A7-CYP3A51PA0A087WV96 503 aa15.01□□□□□ -0.01
ABCF1-206ENST00000479542 IGKV6-21A0A0C4DH24 114 aa15.01□□□□□ -0.01
ABCF1-206ENST00000479542 EPB41L2O43491 1005 aaKnown RBP15.01□□□□□ -0.01
ABCF1-206ENST00000479542 CSPG5O95196 566 aa15.01□□□□□ -0.01
ABCF1-206ENST00000479542 SKIP12755 728 aa15.01□□□□□ -0.01
ABCF1-206ENST00000479542 CYP3A7P24462 503 aa15.01□□□□□ -0.01
ABCF1-206ENST00000479542 TECP42680 631 aa15.01□□□□□ -0.01
ABCF1-206ENST00000479542 CLCN3P51790 818 aa15.01□□□□□ -0.01
ABCF1-206ENST00000479542 POLGP54098 1239 aaPredicted RBP15.01□□□□□ -0.01
ABCF1-206ENST00000479542 TCF15Q12870 199 aa15.01□□□□□ -0.01
ABCF1-206ENST00000479542 SMC1AQ14683 1233 aaKnown RBP15.01□□□□□ -0.01
ABCF1-206ENST00000479542 Q4G0T1 1027 aa15.01□□□□□ -0.01
ABCF1-206ENST00000479542 B3GNT9Q6UX72 402 aa15.01□□□□□ -0.01
ABCF1-206ENST00000479542 CENPQQ7L2Z9 268 aaPredicted RBP15.01□□□□□ -0.01
ABCF1-206ENST00000479542 TMC7Q7Z402 723 aa15.01□□□□□ -0.01
ABCF1-206ENST00000479542 UBALD2Q8IYN6 164 aa15.01□□□□□ -0.01
ABCF1-206ENST00000479542 INO80BQ9C086 356 aaPredicted RBP15.01□□□□□ -0.01
ABCF1-206ENST00000479542 ENTPD7Q9NQZ7 604 aa15.01□□□□□ -0.01
ABCF1-206ENST00000479542 SAMM50Q9Y512 469 aa15.01□□□□□ -0.01
ABCF1-206ENST00000479542 WDR81Q562E7 1941 aa15□□□□□ -0.01
ABCF1-206ENST00000479542 C2orf71A6NGG8 1288 aa15□□□□□ -0.01
ABCF1-206ENST00000479542 HIDE1A8MVS5 230 aa15□□□□□ -0.01
ABCF1-206ENST00000479542 MSH4O15457 936 aa15□□□□□ -0.01
ABCF1-206ENST00000479542 ZNF623O75123 536 aa15□□□□□ -0.01
ABCF1-206ENST00000479542 CDC45O75419 566 aa15□□□□□ -0.01
ABCF1-206ENST00000479542 PSMD10O75832 226 aa15□□□□□ -0.01
ABCF1-206ENST00000479542 AVPR2P30518 371 aa15□□□□□ -0.01
ABCF1-206ENST00000479542 ALDH7A1P49419 539 aaKnown RBP15□□□□□ -0.01
ABCF1-206ENST00000479542 FGD1P98174 961 aa15□□□□□ -0.01
ABCF1-206ENST00000479542 RBM10P98175 930 aaKnown RBP15□□□□□ -0.01
ABCF1-206ENST00000479542 AKAP17AQ02040 695 aaKnown RBP15□□□□□ -0.01
ABCF1-206ENST00000479542 XKR3Q5GH77 459 aa15□□□□□ -0.01
ABCF1-206ENST00000479542 CLLU1OSQ5K130 101 aa15□□□□□ -0.01
ABCF1-206ENST00000479542 IER5LQ5T953 404 aa15□□□□□ -0.01
ABCF1-206ENST00000479542 PLPP4Q5VZY2 271 aa15□□□□□ -0.01
ABCF1-206ENST00000479542 CES5AQ6NT32 575 aa15□□□□□ -0.01
ABCF1-206ENST00000479542 MOXD1Q6UVY6 613 aa15□□□□□ -0.01
ABCF1-206ENST00000479542 Q6ZUG5 572 aa15□□□□□ -0.01
ABCF1-206ENST00000479542 ZNF410Q86VK4 478 aa15□□□□□ -0.01
ABCF1-206ENST00000479542 RIPOR3Q96MK2 946 aa15□□□□□ -0.01
ABCF1-206ENST00000479542 CEP89Q96ST8 783 aa15□□□□□ -0.01
ABCF1-206ENST00000479542 HCSTQ9UBK5 93 aa15□□□□□ -0.01
ABCF1-206ENST00000479542 USTQ9Y2C2 406 aa15□□□□□ -0.01
ABCF1-206ENST00000479542 CACNA1HO95180 2353 aa15□□□□□ -0.01
ABCF1-206ENST00000479542 ADAMTS3O15072 1205 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms