RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 FAM217BQ9NTX9 383 aaPredicted RBP12.49□□□□□ -0.41
HDLBP-237ENST00000479169 SPG21Q9NZD8 308 aa12.49□□□□□ -0.41
HDLBP-237ENST00000479169 AKT3Q9Y243 479 aa12.49□□□□□ -0.41
HDLBP-237ENST00000479169 MAFBQ9Y5Q3 323 aaPredicted RBP12.49□□□□□ -0.41
HDLBP-237ENST00000479169 HCFC2Q9Y5Z7 792 aa12.49□□□□□ -0.41
HDLBP-237ENST00000479169 C2orf16Q68DN1 1984 aa12.49□□□□□ -0.41
HDLBP-237ENST00000479169 DCHS1Q96JQ0 3298 aa12.48□□□□□ -0.41
HDLBP-237ENST00000479169 GOLGA8AA7E2F4 631 aa12.48□□□□□ -0.41
HDLBP-237ENST00000479169 GOLGA8BA8MQT2 603 aa12.48□□□□□ -0.41
HDLBP-237ENST00000479169 HOXA2O43364 376 aa12.48□□□□□ -0.41
HDLBP-237ENST00000479169 BRD1O95696 1058 aa12.48□□□□□ -0.41
HDLBP-237ENST00000479169 HOXB8P17481 243 aaPredicted RBP12.48□□□□□ -0.41
HDLBP-237ENST00000479169 PPM1AP35813 382 aa12.48□□□□□ -0.41
HDLBP-237ENST00000479169 IRX6P78412 446 aaPredicted RBP12.48□□□□□ -0.41
HDLBP-237ENST00000479169 KRT17Q04695 432 aa12.48□□□□□ -0.41
HDLBP-237ENST00000479169 ZNF746Q6NUN9 644 aaPredicted RBP12.48□□□□□ -0.41
HDLBP-237ENST00000479169 EFCAB12Q6NXP0 572 aa12.48□□□□□ -0.41
HDLBP-237ENST00000479169 FAM43BQ6ZT52 329 aaPredicted RBP12.48□□□□□ -0.41
HDLBP-237ENST00000479169 TEX2Q8IWB9 1127 aa12.48□□□□□ -0.41
HDLBP-237ENST00000479169 ABI1Q8IZP0 508 aa12.48□□□□□ -0.41
HDLBP-237ENST00000479169 SLC39A11Q8N1S5 342 aa12.48□□□□□ -0.41
HDLBP-237ENST00000479169 LINC01465Q8N7H1 131 aa12.48□□□□□ -0.41
HDLBP-237ENST00000479169 CASP10Q92851 521 aa12.48□□□□□ -0.41
HDLBP-237ENST00000479169 GABBR1Q9UBS5 961 aa12.48□□□□□ -0.41
HDLBP-237ENST00000479169 KLF18A0A0U1RQI7 1052 aa12.47□□□□□ -0.41
HDLBP-237ENST00000479169 C2orf71A6NGG8 1288 aa12.47□□□□□ -0.41
HDLBP-237ENST00000479169 NT5C1B-RDH14C9J2C7 533 aa12.47□□□□□ -0.41
HDLBP-237ENST00000479169 hCG_1984214I3L0E3 225 aa12.47□□□□□ -0.41
HDLBP-237ENST00000479169 ZNF862O60290 1169 aa12.47□□□□□ -0.41
HDLBP-237ENST00000479169 CLASP2O75122 1294 aaKnown RBP12.47□□□□□ -0.41
HDLBP-237ENST00000479169 ASGR2P07307 311 aa12.47□□□□□ -0.41
HDLBP-237ENST00000479169 PSAPP07602 524 aa12.47□□□□□ -0.41
HDLBP-237ENST00000479169 CYP3A4P08684 503 aa12.47□□□□□ -0.41
HDLBP-237ENST00000479169 ZSCAN20P17040 1043 aaPredicted RBP12.47□□□□□ -0.41
HDLBP-237ENST00000479169 CA8P35219 290 aa12.47□□□□□ -0.41
HDLBP-237ENST00000479169 METAP2P50579 478 aaKnown RBP eCLIP12.47□□□□□ -0.417e-8■■□□□ 14.3
HDLBP-237ENST00000479169 SMC1AQ14683 1233 aaKnown RBP12.47□□□□□ -0.41
HDLBP-237ENST00000479169 TPRNQ4KMQ1 711 aa12.47□□□□□ -0.41
HDLBP-237ENST00000479169 RARS2Q5T160 578 aaKnown RBP12.47□□□□□ -0.41
HDLBP-237ENST00000479169 KANK3Q6NY19 840 aa12.47□□□□□ -0.41
HDLBP-237ENST00000479169 C12orf76Q8N812 135 aaPredicted RBP12.47□□□□□ -0.41
HDLBP-237ENST00000479169 ZNF713Q8N859 430 aaPredicted RBP12.47□□□□□ -0.41
HDLBP-237ENST00000479169 TMEM105Q8N8V8 129 aa12.47□□□□□ -0.41
HDLBP-237ENST00000479169 MRPL43Q8N983 215 aaKnown RBP12.47□□□□□ -0.41
HDLBP-237ENST00000479169 FEZF2Q8TBJ5 459 aa12.47□□□□□ -0.41
HDLBP-237ENST00000479169 HELQQ8TDG4 1101 aa12.47□□□□□ -0.41
HDLBP-237ENST00000479169 AUTS2Q8WXX7 1259 aa12.47□□□□□ -0.41
HDLBP-237ENST00000479169 MAP7D2Q96T17 732 aa12.47□□□□□ -0.41
HDLBP-237ENST00000479169 GLT8D2Q9H1C3 349 aa12.47□□□□□ -0.41
HDLBP-237ENST00000479169 TCEAL9Q9UHQ7 104 aa12.47□□□□□ -0.41
HDLBP-237ENST00000479169 NAP1L2Q9ULW6 460 aaPredicted RBP12.47□□□□□ -0.41
HDLBP-237ENST00000479169 SORCS3Q9UPU3 1222 aa12.47□□□□□ -0.41
HDLBP-237ENST00000479169 NR2E1Q9Y466 385 aa12.47□□□□□ -0.41
HDLBP-237ENST00000479169 MAGEB2O15479 319 aa12.46□□□□□ -0.41
HDLBP-237ENST00000479169 GALR2O43603 387 aaPredicted RBP12.46□□□□□ -0.41
HDLBP-237ENST00000479169 CSDE1O75534 798 aaKnown RBP12.46□□□□□ -0.41
HDLBP-237ENST00000479169 EIF4BP23588 611 aaKnown RBP12.46□□□□□ -0.41
HDLBP-237ENST00000479169 GPC3P51654 580 aa12.46□□□□□ -0.41
HDLBP-237ENST00000479169 SETQ01105 290 aaPredicted RBP12.46□□□□□ -0.41
HDLBP-237ENST00000479169 EXOSC10Q01780 885 aaKnown RBP12.46□□□□□ -0.41
HDLBP-237ENST00000479169 MTMR3Q13615 1198 aa12.46□□□□□ -0.41
HDLBP-237ENST00000479169 UGCGQ16739 394 aa12.46□□□□□ -0.41
HDLBP-237ENST00000479169 PFKFB3Q16875 520 aaPredicted RBP12.46□□□□□ -0.41
HDLBP-237ENST00000479169 ADCK5Q3MIX3 580 aa12.46□□□□□ -0.41
HDLBP-237ENST00000479169 PRR16Q569H4 304 aa12.46□□□□□ -0.41
HDLBP-237ENST00000479169 CES5AQ6NT32 575 aa12.46□□□□□ -0.41
HDLBP-237ENST00000479169 ASCL5Q7RTU5 278 aa12.46□□□□□ -0.41
HDLBP-237ENST00000479169 ZNF598Q86UK7 904 aaKnown RBP12.46□□□□□ -0.41
HDLBP-237ENST00000479169 TMEM173Q86WV6 379 aaPredicted RBP12.46□□□□□ -0.41
HDLBP-237ENST00000479169 SMAP1Q8IYB5 467 aaPredicted RBP12.46□□□□□ -0.41
HDLBP-237ENST00000479169 ADAM7Q9H2U9 754 aa12.46□□□□□ -0.41
HDLBP-237ENST00000479169 TBC1D22BQ9NU19 505 aa12.46□□□□□ -0.41
HDLBP-237ENST00000479169 CEP131Q9UPN4 1083 aa12.46□□□□□ -0.41
HDLBP-237ENST00000479169 SAMM50Q9Y512 469 aa12.46□□□□□ -0.41
HDLBP-237ENST00000479169 PCDHA10Q9Y5I2 948 aa12.46□□□□□ -0.41
HDLBP-237ENST00000479169 GVINP1Q7Z2Y8 2422 aa12.46□□□□□ -0.42
HDLBP-237ENST00000479169 OATP04181 439 aa12.45□□□□□ -0.42
HDLBP-237ENST00000479169 DARSP14868 501 aaKnown RBP12.45□□□□□ -0.42
HDLBP-237ENST00000479169 ADD1P35611 737 aaKnown RBP12.45□□□□□ -0.42
HDLBP-237ENST00000479169 BCAR1P56945 870 aa12.45□□□□□ -0.42
HDLBP-237ENST00000479169 PRKCEQ02156 737 aa12.45□□□□□ -0.42
HDLBP-237ENST00000479169 ITIH3Q06033 890 aa12.45□□□□□ -0.42
HDLBP-237ENST00000479169 DRP2Q13474 957 aa12.45□□□□□ -0.42
HDLBP-237ENST00000479169 DHX32Q7L7V1 743 aaKnown RBP12.45□□□□□ -0.42
HDLBP-237ENST00000479169 UBALD2Q8IYN6 164 aa12.45□□□□□ -0.42
HDLBP-237ENST00000479169 RASEFQ8IZ41 740 aa12.45□□□□□ -0.42
HDLBP-237ENST00000479169 REXO1Q8N1G1 1221 aaKnown RBP12.45□□□□□ -0.42
HDLBP-237ENST00000479169 LENG9Q96B70 501 aa12.45□□□□□ -0.42
HDLBP-237ENST00000479169 FAM167AQ96KS9 214 aa12.45□□□□□ -0.42
HDLBP-237ENST00000479169 SCLT1Q96NL6 688 aa12.45□□□□□ -0.42
HDLBP-237ENST00000479169 NECTIN4Q96NY8 510 aa12.45□□□□□ -0.42
HDLBP-237ENST00000479169 IRF2BPLQ9H1B7 796 aa12.45□□□□□ -0.42
HDLBP-237ENST00000479169 A0A0U1RQF3 1178 aa12.44□□□□□ -0.42
HDLBP-237ENST00000479169 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.44□□□□□ -0.42
HDLBP-237ENST00000479169 WDR64B1ANS9 1081 aa12.44□□□□□ -0.42
HDLBP-237ENST00000479169 EDIL3O43854 480 aa12.44□□□□□ -0.42
HDLBP-237ENST00000479169 ZC3H11AO75152 810 aaKnown RBP eCLIP12.44□□□□□ -0.42
HDLBP-237ENST00000479169 CXCL14O95715 111 aa12.44□□□□□ -0.42
HDLBP-237ENST00000479169 EPCAMP16422 314 aa12.44□□□□□ -0.42
HDLBP-237ENST00000479169 TMOD1P28289 359 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms