RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 KBTBD4Q9NVX7 518 aa13□□□□□ -0.33
PDCD11-204ENST00000478543 DBR1Q9UK59 544 aaKnown RBP13□□□□□ -0.33
PDCD11-204ENST00000478543 ZNF215Q9UL58 517 aaPredicted RBP13□□□□□ -0.33
PDCD11-204ENST00000478543 TRPC6Q9Y210 931 aa13□□□□□ -0.33
PDCD11-204ENST00000478543 USO1O60763 962 aaKnown RBP12.99□□□□□ -0.33
PDCD11-204ENST00000478543 CYP11B2P19099 503 aa12.99□□□□□ -0.33
PDCD11-204ENST00000478543 RARRES1P49788 294 aa12.99□□□□□ -0.33
PDCD11-204ENST00000478543 ASIC1P78348 528 aa12.99□□□□□ -0.33
PDCD11-204ENST00000478543 AMPD3Q01432 767 aa12.99□□□□□ -0.33
PDCD11-204ENST00000478543 CACNB1Q02641 598 aaPredicted RBP12.99□□□□□ -0.33
PDCD11-204ENST00000478543 ZNF365Q70YC5 407 aa12.99□□□□□ -0.33
PDCD11-204ENST00000478543 KCTD17Q8N5Z5 321 aa12.99□□□□□ -0.33
PDCD11-204ENST00000478543 ATP8B4Q8TF62 1192 aa12.99□□□□□ -0.33
PDCD11-204ENST00000478543 PPP1R13LQ8WUF5 828 aa12.99□□□□□ -0.33
PDCD11-204ENST00000478543 CEP170P1Q96L14 293 aa12.99□□□□□ -0.33
PDCD11-204ENST00000478543 TOX2Q96NM4 488 aa12.99□□□□□ -0.33
PDCD11-204ENST00000478543 ERAP1Q9NZ08 941 aa12.99□□□□□ -0.33
PDCD11-204ENST00000478543 MYH9P35579 1960 aaKnown RBP12.98□□□□□ -0.33
PDCD11-204ENST00000478543 ARID2Q68CP9 1835 aa12.98□□□□□ -0.33
PDCD11-204ENST00000478543 SYCE3A1L190 88 aa12.98□□□□□ -0.33
PDCD11-204ENST00000478543 FAM86C2PA6NEL3 165 aa12.98□□□□□ -0.33
PDCD11-204ENST00000478543 H3BRB1 525 aa12.98□□□□□ -0.33
PDCD11-204ENST00000478543 ZEB2O60315 1214 aa12.98□□□□□ -0.33
PDCD11-204ENST00000478543 XRCC6P12956 609 aaKnown RBP eCLIP12.98□□□□□ -0.33
PDCD11-204ENST00000478543 MYOGP15173 224 aa12.98□□□□□ -0.33
PDCD11-204ENST00000478543 PSEN2P49810 448 aa12.98□□□□□ -0.33
PDCD11-204ENST00000478543 SLC26A2P50443 739 aa12.98□□□□□ -0.33
PDCD11-204ENST00000478543 ACLYP53396 1101 aa12.98□□□□□ -0.33
PDCD11-204ENST00000478543 DPYDQ12882 1025 aa12.98□□□□□ -0.33
PDCD11-204ENST00000478543 ZSCAN23Q3MJ62 389 aa12.98□□□□□ -0.33
PDCD11-204ENST00000478543 ARSHQ5FYA8 562 aa12.98□□□□□ -0.33
PDCD11-204ENST00000478543 RINT1Q6NUQ1 792 aa12.98□□□□□ -0.33
PDCD11-204ENST00000478543 PADI6Q6TGC4 694 aa12.98□□□□□ -0.33
PDCD11-204ENST00000478543 MAEAQ7L5Y9 396 aa12.98□□□□□ -0.33
PDCD11-204ENST00000478543 ELOA2Q8IYF1 753 aaPredicted RBP12.98□□□□□ -0.33
PDCD11-204ENST00000478543 TRAPPC12Q8WVT3 735 aa12.98□□□□□ -0.33
PDCD11-204ENST00000478543 BBXQ8WY36 941 aaPredicted RBP12.98□□□□□ -0.33
PDCD11-204ENST00000478543 DDX12PQ92771 950 aa12.98□□□□□ -0.33
PDCD11-204ENST00000478543 KAT2BQ92831 832 aa12.98□□□□□ -0.33
PDCD11-204ENST00000478543 SMARCE1Q969G3 411 aa12.98□□□□□ -0.33
PDCD11-204ENST00000478543 C7orf25Q9BPX7 421 aa12.98□□□□□ -0.33
PDCD11-204ENST00000478543 TRIM9Q9C026 710 aa12.98□□□□□ -0.33
PDCD11-204ENST00000478543 LRRC27Q9C0I9 530 aa12.98□□□□□ -0.33
PDCD11-204ENST00000478543 RNPEPQ9H4A4 650 aa12.98□□□□□ -0.33
PDCD11-204ENST00000478543 TUT1Q9H6E5 874 aaKnown RBP12.98□□□□□ -0.33
PDCD11-204ENST00000478543 POLD4Q9HCU8 107 aa12.98□□□□□ -0.33
PDCD11-204ENST00000478543 CYP26B1Q9NR63 512 aa12.98□□□□□ -0.33
PDCD11-204ENST00000478543 ARIH1Q9Y4X5 557 aaPredicted RBP12.98□□□□□ -0.33
PDCD11-204ENST00000478543 PCDHA5Q9Y5H7 936 aa12.98□□□□□ -0.33
PDCD11-204ENST00000478543 LOXHD1Q8IVV2 1947 aa12.98□□□□□ -0.33
PDCD11-204ENST00000478543 UMODL1Q5DID0 1318 aa12.97□□□□□ -0.33
PDCD11-204ENST00000478543 BIN1O00499 593 aa12.97□□□□□ -0.33
PDCD11-204ENST00000478543 HBP1O60381 514 aa12.97□□□□□ -0.33
PDCD11-204ENST00000478543 SMC2O95347 1197 aa12.97□□□□□ -0.33
PDCD11-204ENST00000478543 RPN1P04843 607 aaKnown RBP12.97□□□□□ -0.33
PDCD11-204ENST00000478543 IDEP14735 1019 aa12.97□□□□□ -0.33
PDCD11-204ENST00000478543 CDK7P50613 346 aa12.97□□□□□ -0.33
PDCD11-204ENST00000478543 RABGGTBP53611 331 aa12.97□□□□□ -0.33
PDCD11-204ENST00000478543 IGBP1P78318 339 aa12.97□□□□□ -0.33
PDCD11-204ENST00000478543 PURAQ00577 322 aaKnown RBP12.97□□□□□ -0.33
PDCD11-204ENST00000478543 MFSD10Q14728 455 aa12.97□□□□□ -0.33
PDCD11-204ENST00000478543 KCNA10Q16322 511 aa12.97□□□□□ -0.33
PDCD11-204ENST00000478543 KIAA0753Q2KHM9 967 aa12.97□□□□□ -0.33
PDCD11-204ENST00000478543 ISM2Q6H9L7 571 aa12.97□□□□□ -0.33
PDCD11-204ENST00000478543 CXCL17Q6UXB2 119 aa12.97□□□□□ -0.33
PDCD11-204ENST00000478543 C1orf186Q6ZWK4 172 aa12.97□□□□□ -0.33
PDCD11-204ENST00000478543 RNF180Q86T96 592 aa12.97□□□□□ -0.33
PDCD11-204ENST00000478543 ALYREFQ86V81 257 aaKnown RBP12.97□□□□□ -0.33
PDCD11-204ENST00000478543 MICALL1Q8N3F8 863 aa12.97□□□□□ -0.33
PDCD11-204ENST00000478543 KLHDC9Q8NEP7 349 aa12.97□□□□□ -0.33
PDCD11-204ENST00000478543 VWCEQ96DN2 955 aa12.97□□□□□ -0.33
PDCD11-204ENST00000478543 MTG1Q9BT17 334 aaPredicted RBP12.97□□□□□ -0.33
PDCD11-204ENST00000478543 NIFKQ9BYG3 293 aaKnown RBP12.97□□□□□ -0.33
PDCD11-204ENST00000478543 ZHX3Q9H4I2 956 aa12.97□□□□□ -0.33
PDCD11-204ENST00000478543 STARD7Q9NQZ5 370 aa12.97□□□□□ -0.33
PDCD11-204ENST00000478543 KIAA1468Q9P260 1216 aa12.97□□□□□ -0.33
PDCD11-204ENST00000478543 DCDC2CA8MYV0 355 aa12.96□□□□□ -0.33
PDCD11-204ENST00000478543 RSPH10B2B2RC85 870 aa12.96□□□□□ -0.33
PDCD11-204ENST00000478543 RFXAPO00287 272 aa12.96□□□□□ -0.33
PDCD11-204ENST00000478543 KPNA6O60684 536 aa12.96□□□□□ -0.33
PDCD11-204ENST00000478543 LETM1O95202 739 aaPredicted RBP12.96□□□□□ -0.33
PDCD11-204ENST00000478543 F2P00734 622 aa12.96□□□□□ -0.33
PDCD11-204ENST00000478543 ASGR1P07306 291 aa12.96□□□□□ -0.33
PDCD11-204ENST00000478543 RSPH10BP0C881 870 aa12.96□□□□□ -0.33
PDCD11-204ENST00000478543 INSRRP14616 1297 aa12.96□□□□□ -0.33
PDCD11-204ENST00000478543 CST5P28325 142 aaPredicted RBP12.96□□□□□ -0.33
PDCD11-204ENST00000478543 POLGP54098 1239 aaPredicted RBP12.96□□□□□ -0.33
PDCD11-204ENST00000478543 NKX3-2P78367 333 aa12.96□□□□□ -0.33
PDCD11-204ENST00000478543 PPFIA1Q13136 1202 aa12.96□□□□□ -0.33
PDCD11-204ENST00000478543 GIT2Q14161 759 aa12.96□□□□□ -0.33
PDCD11-204ENST00000478543 RBM43Q6ZSC3 357 aaKnown RBP12.96□□□□□ -0.33
PDCD11-204ENST00000478543 DNAJC19Q96DA6 116 aa12.96□□□□□ -0.33
PDCD11-204ENST00000478543 REEP2Q9BRK0 252 aa12.96□□□□□ -0.33
PDCD11-204ENST00000478543 PPP1R12CQ9BZL4 782 aa12.96□□□□□ -0.33
PDCD11-204ENST00000478543 CD320Q9NPF0 282 aa12.96□□□□□ -0.33
PDCD11-204ENST00000478543 MAN1B1Q9UKM7 699 aa12.96□□□□□ -0.33
PDCD11-204ENST00000478543 HCN4Q9Y3Q4 1203 aa12.96□□□□□ -0.33
PDCD11-204ENST00000478543 EPOPA6NHQ4 379 aa12.95□□□□□ -0.34
PDCD11-204ENST00000478543 ZBTB42B2RXF5 422 aa12.95□□□□□ -0.34
PDCD11-204ENST00000478543 HAS3O00219 553 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms