RNA–Protein interactions for RNA: ENST00000478080.5

CDHR3-211, Transcript of cadherin related family member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDHR3, Length 2,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-211ENST00000478080 SCYL3Q8IZE3 742 aa9.7□□□□□ -0.86
CDHR3-211ENST00000478080 HDAC7Q8WUI4 952 aa9.7□□□□□ -0.86
CDHR3-211ENST00000478080 NOX5Q96PH1 765 aa9.7□□□□□ -0.86
CDHR3-211ENST00000478080 ALS2CR12Q96Q35 445 aa9.7□□□□□ -0.86
CDHR3-211ENST00000478080 STRA6Q9BX79 667 aa9.7□□□□□ -0.86
CDHR3-211ENST00000478080 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.7□□□□□ -0.86
CDHR3-211ENST00000478080 RNF146Q9NTX7 359 aa9.7□□□□□ -0.86
CDHR3-211ENST00000478080 DMAC2Q9NW81 257 aa9.7□□□□□ -0.86
CDHR3-211ENST00000478080 EXOC3O60645 756 aa9.7□□□□□ -0.86
CDHR3-211ENST00000478080 PPP1R37O75864 691 aa9.7□□□□□ -0.86
CDHR3-211ENST00000478080 MUTP22033 750 aa9.7□□□□□ -0.86
CDHR3-211ENST00000478080 FMO5P49326 533 aa9.7□□□□□ -0.86
CDHR3-211ENST00000478080 SOX10P56693 466 aa9.7□□□□□ -0.86
CDHR3-211ENST00000478080 SP4Q02446 784 aa9.7□□□□□ -0.86
CDHR3-211ENST00000478080 SMC1AQ14683 1233 aaKnown RBP9.7□□□□□ -0.86
CDHR3-211ENST00000478080 NAB2Q15742 525 aa9.7□□□□□ -0.86
CDHR3-211ENST00000478080 SNRNP48Q6IEG0 339 aaKnown RBP9.7□□□□□ -0.86
CDHR3-211ENST00000478080 HS2ST1Q7LGA3 356 aa9.7□□□□□ -0.86
CDHR3-211ENST00000478080 ZNF280CQ8ND82 737 aa9.7□□□□□ -0.86
CDHR3-211ENST00000478080 CBWD1Q9BRT8 395 aa9.7□□□□□ -0.86
CDHR3-211ENST00000478080 KIFC3Q9BVG8 833 aa9.7□□□□□ -0.86
CDHR3-211ENST00000478080 SEL1LQ9UBV2 794 aa9.7□□□□□ -0.86
CDHR3-211ENST00000478080 L1RE1Q9UN81 338 aa9.7□□□□□ -0.86
CDHR3-211ENST00000478080 FRMD4BQ9Y2L6 1034 aa9.7□□□□□ -0.86
CDHR3-211ENST00000478080 H3BQF6 201 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 POTEB2H3BUK9 544 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 SLC16A4O15374 487 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 OAS2P29728 719 aaKnown RBP9.69□□□□□ -0.86
CDHR3-211ENST00000478080 JAM2P57087 298 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 RNASE9P60153 205 aaKnown RBP9.69□□□□□ -0.86
CDHR3-211ENST00000478080 GHRHRQ02643 423 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 CKAP4Q07065 602 aaKnown RBP9.69□□□□□ -0.86
CDHR3-211ENST00000478080 KCTD19Q17RG1 926 aaPredicted RBP9.69□□□□□ -0.86
CDHR3-211ENST00000478080 NIPA1Q7RTP0 329 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 HNRNPLLQ8WVV9 542 aaKnown RBP9.69□□□□□ -0.86
CDHR3-211ENST00000478080 PICK1Q9NRD5 415 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 KCND2Q9NZV8 630 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 MAP2K7O14733 419 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 MYBL2P10244 700 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 PEX3P56589 373 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 SLC7A5Q01650 507 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 TMEM132BQ14DG7 1078 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 UBXN6Q9BZV1 441 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 PLEKHA4Q9H4M7 779 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 NAGPAQ9UK23 515 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 COL11A1P12107 1806 aaPredicted RBP9.69□□□□□ -0.86
CDHR3-211ENST00000478080 LRRIQ3A6PVS8 624 aaPredicted RBP9.69□□□□□ -0.86
CDHR3-211ENST00000478080 ATP8B1O43520 1251 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 N4BP1O75113 896 aaKnown RBP9.69□□□□□ -0.86
CDHR3-211ENST00000478080 RGS20O76081 388 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 NR3C2P08235 984 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 HIRAP54198 1017 aaPredicted RBP9.69□□□□□ -0.86
CDHR3-211ENST00000478080 XKR9Q5GH70 373 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 FAM102BQ5T8I3 360 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 SPATA4Q8NEY3 305 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 REPS2Q8NFH8 660 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 NEK9Q8TD19 979 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 LRRC1Q9BTT6 524 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 PDE11AQ9HCR9 933 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 TBC1D22BQ9NU19 505 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 GGA3Q9NZ52 723 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 LARSQ9P2J5 1176 aaKnown RBP9.69□□□□□ -0.86
CDHR3-211ENST00000478080 ZNF112Q9UJU3 913 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 DNAJC12Q9UKB3 198 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 HYOU1Q9Y4L1 999 aa9.69□□□□□ -0.86
CDHR3-211ENST00000478080 GRID2IPA4D2P6 1211 aa9.68□□□□□ -0.86
CDHR3-211ENST00000478080 GOLGA8IPA6NC78 632 aa9.68□□□□□ -0.86
CDHR3-211ENST00000478080 GOLGA8JA6NMD2 632 aa9.68□□□□□ -0.86
CDHR3-211ENST00000478080 TMCO5BA8MYB1 307 aa9.68□□□□□ -0.86
CDHR3-211ENST00000478080 DDX3XO00571 662 aaKnown RBP eCLIP9.68□□□□□ -0.86
CDHR3-211ENST00000478080 PPP1R12BO60237 982 aaPredicted RBP9.68□□□□□ -0.86
CDHR3-211ENST00000478080 ERLIN1O75477 346 aa9.68□□□□□ -0.86
CDHR3-211ENST00000478080 PLS3P13797 630 aa9.68□□□□□ -0.86
CDHR3-211ENST00000478080 TUBB4BP68371 445 aa9.68□□□□□ -0.86
CDHR3-211ENST00000478080 DRAP1Q14919 205 aaPredicted RBP9.68□□□□□ -0.86
CDHR3-211ENST00000478080 NFIL3Q16649 462 aa9.68□□□□□ -0.86
CDHR3-211ENST00000478080 ARHGAP44Q17R89 818 aa9.68□□□□□ -0.86
CDHR3-211ENST00000478080 DCAF15Q66K64 600 aa9.68□□□□□ -0.86
CDHR3-211ENST00000478080 WDR93Q6P2C0 686 aa9.68□□□□□ -0.86
CDHR3-211ENST00000478080 ALKBH5Q6P6C2 394 aaKnown RBP9.68□□□□□ -0.86
CDHR3-211ENST00000478080 STXBP4Q6ZWJ1 553 aa9.68□□□□□ -0.86
CDHR3-211ENST00000478080 ANO5Q75V66 913 aa9.68□□□□□ -0.86
CDHR3-211ENST00000478080 HAUS6Q7Z4H7 955 aa9.68□□□□□ -0.86
CDHR3-211ENST00000478080 RNF10Q8N5U6 811 aaKnown RBP9.68□□□□□ -0.86
CDHR3-211ENST00000478080 PLEKHO2Q8TD55 490 aa9.68□□□□□ -0.86
CDHR3-211ENST00000478080 CCDC43Q96MW1 224 aaKnown RBP9.68□□□□□ -0.86
CDHR3-211ENST00000478080 GPR88Q9GZN0 384 aa9.68□□□□□ -0.86
CDHR3-211ENST00000478080 TCEAL9Q9UHQ7 104 aa9.68□□□□□ -0.86
CDHR3-211ENST00000478080 DBR1Q9UK59 544 aaKnown RBP9.68□□□□□ -0.86
CDHR3-211ENST00000478080 ZNF214Q9UL59 606 aaPredicted RBP9.68□□□□□ -0.86
CDHR3-211ENST00000478080 EVI5O60447 810 aa9.68□□□□□ -0.86
CDHR3-211ENST00000478080 DSG3P32926 999 aa9.68□□□□□ -0.86
CDHR3-211ENST00000478080 PSMC5P62195 406 aa9.68□□□□□ -0.86
CDHR3-211ENST00000478080 GABPB1Q06547 395 aaPredicted RBP9.68□□□□□ -0.86
CDHR3-211ENST00000478080 PPP3CAQ08209 521 aa9.68□□□□□ -0.86
CDHR3-211ENST00000478080 BFSP1Q12934 665 aa9.68□□□□□ -0.86
CDHR3-211ENST00000478080 CASP8Q14790 479 aa9.68□□□□□ -0.86
CDHR3-211ENST00000478080 CCDC181Q5TID7 509 aa9.68□□□□□ -0.86
CDHR3-211ENST00000478080 PHLDB3Q6NSJ2 640 aa9.68□□□□□ -0.86
CDHR3-211ENST00000478080 HDXQ7Z353 690 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms