RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 RIC8AQ9NPQ8 531 aa23.02■■□□□ 1.28
PDLIM1-202ENST00000477757 CYP26B1Q9NR63 512 aa23.02■■□□□ 1.28
PDLIM1-202ENST00000477757 DNAH14Q0VDD8 3507 aa23.02■■□□□ 1.28
PDLIM1-202ENST00000477757 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.01■■□□□ 1.27
PDLIM1-202ENST00000477757 ZSCAN20P17040 1043 aaPredicted RBP23.01■■□□□ 1.27
PDLIM1-202ENST00000477757 CA8P35219 290 aa23.01■■□□□ 1.27
PDLIM1-202ENST00000477757 SREBF1P36956 1147 aa23.01■■□□□ 1.27
PDLIM1-202ENST00000477757 WWC2Q6AWC2 1192 aa23.01■■□□□ 1.27
PDLIM1-202ENST00000477757 PPP1R18Q6NYC8 613 aa23.01■■□□□ 1.27
PDLIM1-202ENST00000477757 MIS18BP1Q6P0N0 1132 aa23.01■■□□□ 1.27
PDLIM1-202ENST00000477757 METTL13Q8N6R0 699 aa23.01■■□□□ 1.27
PDLIM1-202ENST00000477757 RNF169Q8NCN4 708 aa23.01■■□□□ 1.27
PDLIM1-202ENST00000477757 BBXQ8WY36 941 aaPredicted RBP23.01■■□□□ 1.27
PDLIM1-202ENST00000477757 TMEM87BQ96K49 555 aa23.01■■□□□ 1.27
PDLIM1-202ENST00000477757 MRPL9Q9BYD2 267 aaKnown RBP23.01■■□□□ 1.27
PDLIM1-202ENST00000477757 IRAK3Q9Y616 596 aa23.01■■□□□ 1.27
PDLIM1-202ENST00000477757 PI15O43692 258 aa23■■□□□ 1.27
PDLIM1-202ENST00000477757 CXCL14O95715 111 aa23■■□□□ 1.27
PDLIM1-202ENST00000477757 EPCAMP16422 314 aa23■■□□□ 1.27
PDLIM1-202ENST00000477757 CHMLP26374 656 aa23■■□□□ 1.27
PDLIM1-202ENST00000477757 LIFRP42702 1097 aa23■■□□□ 1.27
PDLIM1-202ENST00000477757 TTC22Q5TAA0 569 aa23■■□□□ 1.27
PDLIM1-202ENST00000477757 TYW1BQ6NUM6 668 aa23■■□□□ 1.27
PDLIM1-202ENST00000477757 SWSAP1Q6NVH7 229 aa23■■□□□ 1.27
PDLIM1-202ENST00000477757 KANK3Q6NY19 840 aa23■■□□□ 1.27
PDLIM1-202ENST00000477757 ZNF598Q86UK7 904 aaKnown RBP23■■□□□ 1.27
PDLIM1-202ENST00000477757 CKAP2LQ8IYA6 745 aa23■■□□□ 1.27
PDLIM1-202ENST00000477757 CCDC82Q8N4S0 544 aa23■■□□□ 1.27
PDLIM1-202ENST00000477757 TMEM169Q96HH4 297 aa23■■□□□ 1.27
PDLIM1-202ENST00000477757 RTP3Q9BQQ7 232 aa23■■□□□ 1.27
PDLIM1-202ENST00000477757 ADAMTS10Q9H324 1103 aa23■■□□□ 1.27
PDLIM1-202ENST00000477757 A0A0U1RQF3 1178 aa22.99■■□□□ 1.27
PDLIM1-202ENST00000477757 DHX15O43143 795 aaKnown RBP22.99■■□□□ 1.27
PDLIM1-202ENST00000477757 EIF4BP23588 611 aaKnown RBP22.99■■□□□ 1.27
PDLIM1-202ENST00000477757 ALDH7A1P49419 539 aaKnown RBP22.99■■□□□ 1.27
PDLIM1-202ENST00000477757 METAP2P50579 478 aaKnown RBP eCLIP22.99■■□□□ 1.276e-8■□□□□ 10.7
PDLIM1-202ENST00000477757 CLCN3P51790 818 aa22.99■■□□□ 1.27
PDLIM1-202ENST00000477757 BCAR1P56945 870 aa22.99■■□□□ 1.27
PDLIM1-202ENST00000477757 RAB11FIP4Q86YS3 637 aa22.99■■□□□ 1.27
PDLIM1-202ENST00000477757 VPS52Q8N1B4 723 aa22.99■■□□□ 1.27
PDLIM1-202ENST00000477757 LINC01465Q8N7H1 131 aa22.99■■□□□ 1.27
PDLIM1-202ENST00000477757 DTWD2Q8NBA8 298 aa22.99■■□□□ 1.27
PDLIM1-202ENST00000477757 HELQQ8TDG4 1101 aa22.99■■□□□ 1.27
PDLIM1-202ENST00000477757 SLC22A17Q8WUG5 538 aa22.99■■□□□ 1.27
PDLIM1-202ENST00000477757 ACSF2Q96CM8 615 aaPredicted RBP22.99■■□□□ 1.27
PDLIM1-202ENST00000477757 MAP7D2Q96T17 732 aa22.99■■□□□ 1.27
PDLIM1-202ENST00000477757 DUSP12Q9UNI6 340 aa22.99■■□□□ 1.27
PDLIM1-202ENST00000477757 CEP131Q9UPN4 1083 aa22.99■■□□□ 1.27
PDLIM1-202ENST00000477757 MAFBQ9Y5Q3 323 aaPredicted RBP22.99■■□□□ 1.27
PDLIM1-202ENST00000477757 NCOR2Q9Y618 2525 aa22.99■■□□□ 1.27
PDLIM1-202ENST00000477757 SGSM2O43147 1006 aa22.98■■□□□ 1.27
PDLIM1-202ENST00000477757 MCM5P33992 734 aa22.98■■□□□ 1.27
PDLIM1-202ENST00000477757 ADCY7P51828 1080 aa22.98■■□□□ 1.27
PDLIM1-202ENST00000477757 POLGP54098 1239 aaPredicted RBP22.98■■□□□ 1.27
PDLIM1-202ENST00000477757 NAPAP54920 295 aa22.98■■□□□ 1.27
PDLIM1-202ENST00000477757 NLRP11P59045 1033 aaKnown RBP22.98■■□□□ 1.27
PDLIM1-202ENST00000477757 AP3B2Q13367 1082 aa22.98■■□□□ 1.27
PDLIM1-202ENST00000477757 TDGQ13569 410 aa22.98■■□□□ 1.27
PDLIM1-202ENST00000477757 GIT2Q14161 759 aa22.98■■□□□ 1.27
PDLIM1-202ENST00000477757 CCDC149Q6ZUS6 474 aa22.98■■□□□ 1.27
PDLIM1-202ENST00000477757 ZNF710Q8N1W2 664 aa22.98■■□□□ 1.27
PDLIM1-202ENST00000477757 AUTS2Q8WXX7 1259 aa22.98■■□□□ 1.27
PDLIM1-202ENST00000477757 MAP4K1Q92918 833 aa22.98■■□□□ 1.27
PDLIM1-202ENST00000477757 SFXN1Q9H9B4 322 aa22.98■■□□□ 1.27
PDLIM1-202ENST00000477757 AKT3Q9Y243 479 aa22.98■■□□□ 1.27
PDLIM1-202ENST00000477757 SLC12A7Q9Y666 1083 aa22.98■■□□□ 1.27
PDLIM1-202ENST00000477757 CNTNAP5Q8WYK1 1306 aa22.98■■□□□ 1.27
PDLIM1-202ENST00000477757 NT5C1B-RDH14C9J2C7 533 aa22.97■■□□□ 1.27
PDLIM1-202ENST00000477757 MAGEB2O15479 319 aa22.97■■□□□ 1.27
PDLIM1-202ENST00000477757 CTSAP10619 480 aa22.97■■□□□ 1.27
PDLIM1-202ENST00000477757 TMC5Q6UXY8 1006 aa22.97■■□□□ 1.27
PDLIM1-202ENST00000477757 OTOP3Q7RTS5 596 aa22.97■■□□□ 1.27
PDLIM1-202ENST00000477757 CABP7Q86V35 215 aa22.97■■□□□ 1.27
PDLIM1-202ENST00000477757 TMEM173Q86WV6 379 aaPredicted RBP22.97■■□□□ 1.27
PDLIM1-202ENST00000477757 SIX5Q8N196 739 aa22.97■■□□□ 1.27
PDLIM1-202ENST00000477757 FANCBQ8NB91 859 aa22.97■■□□□ 1.27
PDLIM1-202ENST00000477757 TMEM87AQ8NBN3 555 aa22.97■■□□□ 1.27
PDLIM1-202ENST00000477757 FEZF2Q8TBJ5 459 aa22.97■■□□□ 1.27
PDLIM1-202ENST00000477757 RSPH1Q8WYR4 309 aa22.97■■□□□ 1.27
PDLIM1-202ENST00000477757 SEMA4AQ9H3S1 761 aa22.97■■□□□ 1.27
PDLIM1-202ENST00000477757 RBM8AQ9Y5S9 174 aaKnown RBP22.97■■□□□ 1.27
PDLIM1-202ENST00000477757 IGLV3-22A0A075B6J6 115 aa22.96■■□□□ 1.27
PDLIM1-202ENST00000477757 CARNS1A5YM72 827 aa22.96■■□□□ 1.27
PDLIM1-202ENST00000477757 FAM86B1E9PN63 330 aa22.96■■□□□ 1.27
PDLIM1-202ENST00000477757 IPO5O00410 1097 aaKnown RBP22.96■■□□□ 1.27
PDLIM1-202ENST00000477757 FAM86B2P0C5J1 330 aa22.96■■□□□ 1.27
PDLIM1-202ENST00000477757 ZNF76P36508 570 aa22.96■■□□□ 1.27
PDLIM1-202ENST00000477757 COL9A3Q14050 684 aaPredicted RBP22.96■■□□□ 1.27
PDLIM1-202ENST00000477757 GPR149Q86SP6 731 aa22.96■■□□□ 1.27
PDLIM1-202ENST00000477757 DDX53Q86TM3 631 aaKnown RBP22.96■■□□□ 1.27
PDLIM1-202ENST00000477757 PLA2G4DQ86XP0 818 aa22.96■■□□□ 1.27
PDLIM1-202ENST00000477757 RMDN1Q96DB5 314 aa22.96■■□□□ 1.27
PDLIM1-202ENST00000477757 FBXL21Q9UKT6 434 aa22.96■■□□□ 1.27
PDLIM1-202ENST00000477757 MED19A0JLT2 244 aaPredicted RBP22.95■■□□□ 1.26
PDLIM1-202ENST00000477757 ZC3H11AO75152 810 aaKnown RBP eCLIP22.95■■□□□ 1.26
PDLIM1-202ENST00000477757 DARSP14868 501 aaKnown RBP22.95■■□□□ 1.26
PDLIM1-202ENST00000477757 TMOD1P28289 359 aa22.95■■□□□ 1.26
PDLIM1-202ENST00000477757 CLK2P49760 499 aaKnown RBP22.95■■□□□ 1.26
PDLIM1-202ENST00000477757 ZNF746Q6NUN9 644 aaPredicted RBP22.95■■□□□ 1.26
PDLIM1-202ENST00000477757 PPFIBP1Q86W92 1011 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms