RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 RTN1Q16799 776 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 EFCAB12Q6NXP0 572 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 PPP1R18Q6NYC8 613 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 ABHD15Q6UXT9 468 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 LRRC55Q6ZSA7 311 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 ASCL5Q7RTU5 278 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 FRMD5Q7Z6J6 570 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 UBALD2Q8IYN6 164 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 LRRC71Q8N4P6 559 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 C12orf76Q8N812 135 aaPredicted RBP7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 TMEM105Q8N8V8 129 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 NLRP7Q8WX94 980 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 AUTS2Q8WXX7 1259 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 BBXQ8WY36 941 aaPredicted RBP7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 TMEM169Q96HH4 297 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 TCEANC2Q96MN5 208 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 NECTIN4Q96NY8 510 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 ELAC1Q9H777 363 aaKnown RBP7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 ANO2Q9NQ90 1003 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 RBM28Q9NW13 759 aaKnown RBP7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 CEP131Q9UPN4 1083 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 HCFC2Q9Y5Z7 792 aa7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 V9GY48 417 aaPredicted RBP7.57□□□□□ -1.2
RTFDC1-206ENST00000477485 IGKV6D-21A0A0A0MT36 114 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 PRR23AA6NEV1 266 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 C2orf71A6NGG8 1288 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 GOLGA8AA7E2F4 631 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 GOLGA8BA8MQT2 603 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 ZBTB42B2RXF5 422 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 FAM86B1E9PN63 330 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 MEIS1O00470 390 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 ZBTB43O43298 467 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 CHMP2AO43633 222 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 CLASP2O75122 1294 aaKnown RBP7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 GPR32O75388 356 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 ATG7O95352 703 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 SSBP05455 408 aaKnown RBP eCLIP7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 FAM86B2P0C5J1 330 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 SREBF1P36956 1147 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 LIFRP42702 1097 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 ALDH7A1P49419 539 aaKnown RBP7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 RNASELQ05823 741 aaKnown RBP7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 ITIH3Q06033 890 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 AP3B2Q13367 1082 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 COL9A3Q14050 684 aaPredicted RBP7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 ATAT1Q5SQI0 421 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 CREB3L3Q68CJ9 461 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 TYW1BQ6NUM6 668 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 KANK3Q6NY19 840 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 TMEM184AQ6ZMB5 413 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 ECHDC2Q86YB7 292 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 VPS52Q8N1B4 723 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 RASGRP4Q8TDF6 673 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 KCNG4Q8TDN1 519 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 CASD1Q96PB1 797 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 MTA3Q9BTC8 594 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 MRPL9Q9BYD2 267 aaKnown RBP7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 GBP3Q9H0R5 595 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 ADAM7Q9H2U9 754 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 LIMD1Q9UGP4 676 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 FBXL21Q9UKT6 434 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 INPP5FQ9Y2H2 1132 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 MIA3Q5JRA6 1907 aa7.56□□□□□ -1.2
RTFDC1-206ENST00000477485 ARID2Q68CP9 1835 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 MTCL1Q9Y4B5 1905 aaKnown RBP7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 KLF18A0A0U1RQI7 1052 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 hCG_1984214I3L0E3 225 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 MAGEB2O15479 319 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 CSDE1O75534 798 aaKnown RBP7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 EPCAMP16422 314 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 ATP4AP20648 1035 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 EIF4BP23588 611 aaKnown RBP7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 NUBP1P53384 320 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 BCAR1P56945 870 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 IRX6P78412 446 aaPredicted RBP7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 FAM189BP81408 668 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 SETQ01105 290 aaPredicted RBP7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 PRKCEQ02156 737 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 KCNC3Q14003 757 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 DSC3Q14574 896 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 PRR16Q569H4 304 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 CLLU1OSQ5K130 101 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 MCTP2Q6DN12 878 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 ASTLQ6HA08 431 aaPredicted RBP7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 TWF2Q6IBS0 349 aaKnown RBP7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 KIAA1841Q6NSI8 718 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 ZNF746Q6NUN9 644 aaPredicted RBP7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 APOA5Q6Q788 366 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 TMC5Q6UXY8 1006 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 NIPA1Q7RTP0 329 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 CABP7Q86V35 215 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 SMAP1Q8IYB5 467 aaPredicted RBP7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 SLC39A11Q8N1S5 342 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 ZNF713Q8N859 430 aaPredicted RBP7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 MRPL43Q8N983 215 aaKnown RBP7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 LPPQ93052 612 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 NKD2Q969F2 451 aaPredicted RBP7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 ACSF2Q96CM8 615 aaPredicted RBP7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 FAM167AQ96KS9 214 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 HINFPQ9BQA5 517 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms