RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 CIITAP33076 1130 aa12.99□□□□□ -0.33
LSM2-212ENST00000477182 KRT85P78386 507 aa12.99□□□□□ -0.33
LSM2-212ENST00000477182 SF3A1Q15459 793 aaKnown RBP12.99□□□□□ -0.33
LSM2-212ENST00000477182 FAM26DQ5JW98 314 aa12.99□□□□□ -0.33
LSM2-212ENST00000477182 ATL3Q6DD88 541 aa12.99□□□□□ -0.33
LSM2-212ENST00000477182 XRRA1Q6P2D8 792 aa12.99□□□□□ -0.33
LSM2-212ENST00000477182 VSIG10LQ86VR7 867 aa12.99□□□□□ -0.33
LSM2-212ENST00000477182 CYP2W1Q8TAV3 490 aa12.99□□□□□ -0.33
LSM2-212ENST00000477182 POF1BQ8WVV4 589 aa12.99□□□□□ -0.33
LSM2-212ENST00000477182 SPATA33Q96N06 139 aa12.99□□□□□ -0.33
LSM2-212ENST00000477182 NAP1L4Q99733 375 aaKnown RBP12.99□□□□□ -0.33
LSM2-212ENST00000477182 MFSD1Q9H3U5 465 aa12.99□□□□□ -0.33
LSM2-212ENST00000477182 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.99□□□□□ -0.33
LSM2-212ENST00000477182 DDX25Q9UHL0 483 aaKnown RBP12.99□□□□□ -0.33
LSM2-212ENST00000477182 TPRP12270 2363 aaKnown RBP12.99□□□□□ -0.33
LSM2-212ENST00000477182 MYO10Q9HD67 2058 aa12.98□□□□□ -0.33
LSM2-212ENST00000477182 EP300Q09472 2414 aaPredicted RBP12.98□□□□□ -0.33
LSM2-212ENST00000477182 CACNA1GO43497 2377 aa12.98□□□□□ -0.33
LSM2-212ENST00000477182 H3BRB1 525 aa12.98□□□□□ -0.33
LSM2-212ENST00000477182 RBAK-RBAKDNI3L0D1 243 aa12.98□□□□□ -0.33
LSM2-212ENST00000477182 NEMFO60524 1076 aa12.98□□□□□ -0.33
LSM2-212ENST00000477182 DGKIO75912 1065 aa12.98□□□□□ -0.33
LSM2-212ENST00000477182 BAG4O95429 457 aaKnown RBP12.98□□□□□ -0.33
LSM2-212ENST00000477182 CEP55Q53EZ4 464 aa12.98□□□□□ -0.33
LSM2-212ENST00000477182 PRR16Q569H4 304 aa12.98□□□□□ -0.33
LSM2-212ENST00000477182 PPP4R3AQ6IN85 833 aa12.98□□□□□ -0.33
LSM2-212ENST00000477182 MOXD1Q6UVY6 613 aa12.98□□□□□ -0.33
LSM2-212ENST00000477182 PLA2G4DQ86XP0 818 aa12.98□□□□□ -0.33
LSM2-212ENST00000477182 POTEDQ86YR6 584 aa12.98□□□□□ -0.33
LSM2-212ENST00000477182 CMTR2Q8IYT2 770 aaKnown RBP12.98□□□□□ -0.33
LSM2-212ENST00000477182 KLHL23Q8NBE8 558 aa12.98□□□□□ -0.33
LSM2-212ENST00000477182 ATP8B4Q8TF62 1192 aa12.98□□□□□ -0.33
LSM2-212ENST00000477182 MBOAT7Q96N66 472 aa12.98□□□□□ -0.33
LSM2-212ENST00000477182 CNTNAP3BQ96NU0 1288 aa12.98□□□□□ -0.33
LSM2-212ENST00000477182 MXRA8Q9BRK3 442 aa12.98□□□□□ -0.33
LSM2-212ENST00000477182 C16orf70Q9BSU1 422 aa12.98□□□□□ -0.33
LSM2-212ENST00000477182 CNTNAP3Q9BZ76 1288 aa12.98□□□□□ -0.33
LSM2-212ENST00000477182 OSBPL7Q9BZF2 842 aa12.98□□□□□ -0.33
LSM2-212ENST00000477182 TUT1Q9H6E5 874 aaKnown RBP12.98□□□□□ -0.33
LSM2-212ENST00000477182 PCDHGC5Q9Y5F6 944 aa12.98□□□□□ -0.33
LSM2-212ENST00000477182 UBIAD1Q9Y5Z9 338 aa12.98□□□□□ -0.33
LSM2-212ENST00000477182 WDR81Q562E7 1941 aa12.98□□□□□ -0.33
LSM2-212ENST00000477182 IGLV3-22A0A075B6J6 115 aa12.97□□□□□ -0.33
LSM2-212ENST00000477182 MEIS1O00470 390 aa12.97□□□□□ -0.33
LSM2-212ENST00000477182 ENPP3O14638 875 aa12.97□□□□□ -0.33
LSM2-212ENST00000477182 FIBPO43427 364 aa12.97□□□□□ -0.33
LSM2-212ENST00000477182 SMIM10L2AP0DMW4 78 aa12.97□□□□□ -0.33
LSM2-212ENST00000477182 SMIM10L2BP0DMW5 78 aa12.97□□□□□ -0.33
LSM2-212ENST00000477182 ITGB5P18084 799 aa12.97□□□□□ -0.33
LSM2-212ENST00000477182 NASPP49321 788 aaPredicted RBP12.97□□□□□ -0.33
LSM2-212ENST00000477182 UBE3AQ05086 875 aa12.97□□□□□ -0.33
LSM2-212ENST00000477182 ORC2Q13416 577 aaPredicted RBP12.97□□□□□ -0.33
LSM2-212ENST00000477182 STK38Q15208 465 aa12.97□□□□□ -0.33
LSM2-212ENST00000477182 PTPAQ15257 358 aa12.97□□□□□ -0.33
LSM2-212ENST00000477182 HSDL1Q3SXM5 330 aa12.97□□□□□ -0.33
LSM2-212ENST00000477182 Q4G0T1 1027 aa12.97□□□□□ -0.33
LSM2-212ENST00000477182 CELF3Q5SZQ8 465 aaKnown RBP12.97□□□□□ -0.33
LSM2-212ENST00000477182 KCNG4Q8TDN1 519 aa12.97□□□□□ -0.33
LSM2-212ENST00000477182 MICAL1Q8TDZ2 1067 aa12.97□□□□□ -0.33
LSM2-212ENST00000477182 LENG9Q96B70 501 aa12.97□□□□□ -0.33
LSM2-212ENST00000477182 TMEM60Q9H2L4 133 aa12.97□□□□□ -0.33
LSM2-212ENST00000477182 RNPEPQ9H4A4 650 aa12.97□□□□□ -0.33
LSM2-212ENST00000477182 GDPD2Q9HCC8 539 aa12.97□□□□□ -0.33
LSM2-212ENST00000477182 JADE2Q9NQC1 790 aa12.97□□□□□ -0.33
LSM2-212ENST00000477182 CFAP45Q9UL16 551 aa12.97□□□□□ -0.33
LSM2-212ENST00000477182 MRPL42Q9Y6G3 142 aaKnown RBP12.97□□□□□ -0.33
LSM2-212ENST00000477182 NCOR2Q9Y618 2525 aa12.97□□□□□ -0.33
LSM2-212ENST00000477182 KIAA1671Q9BY89 1806 aa12.97□□□□□ -0.33
LSM2-212ENST00000477182 STAM2O75886 525 aa12.96□□□□□ -0.33
LSM2-212ENST00000477182 YEATS4O95619 227 aa12.96□□□□□ -0.33
LSM2-212ENST00000477182 BMP15O95972 392 aa12.96□□□□□ -0.33
LSM2-212ENST00000477182 LMNAP02545 664 aaKnown RBP12.96□□□□□ -0.33
LSM2-212ENST00000477182 ARP10275 920 aa12.96□□□□□ -0.33
LSM2-212ENST00000477182 ATP2C1P98194 919 aaPredicted RBP12.96□□□□□ -0.33
LSM2-212ENST00000477182 PTGDRQ13258 359 aa12.96□□□□□ -0.33
LSM2-212ENST00000477182 SLC39A14Q15043 492 aa12.96□□□□□ -0.33
LSM2-212ENST00000477182 CALCRLQ16602 461 aa12.96□□□□□ -0.33
LSM2-212ENST00000477182 PDE12Q6L8Q7 609 aaKnown RBP12.96□□□□□ -0.33
LSM2-212ENST00000477182 NIPA1Q7RTP0 329 aa12.96□□□□□ -0.33
LSM2-212ENST00000477182 NLRX1Q86UT6 975 aa12.96□□□□□ -0.33
LSM2-212ENST00000477182 C4orf32Q8N8J7 132 aa12.96□□□□□ -0.33
LSM2-212ENST00000477182 LINC00301Q8NCQ3 95 aa12.96□□□□□ -0.33
LSM2-212ENST00000477182 LEO1Q8WVC0 666 aaPredicted RBP12.96□□□□□ -0.33
LSM2-212ENST00000477182 SPATA32Q96LK8 384 aa12.96□□□□□ -0.33
LSM2-212ENST00000477182 INPP4AQ96PE3 977 aaPredicted RBP12.96□□□□□ -0.33
LSM2-212ENST00000477182 CEP131Q9UPN4 1083 aa12.96□□□□□ -0.33
LSM2-212ENST00000477182 KAT6AQ92794 2004 aa12.95□□□□□ -0.34
LSM2-212ENST00000477182 SPTLC2O15270 562 aa12.95□□□□□ -0.34
LSM2-212ENST00000477182 MSH4O15457 936 aa12.95□□□□□ -0.34
LSM2-212ENST00000477182 MARCH6O60337 910 aa12.95□□□□□ -0.34
LSM2-212ENST00000477182 GGPS1O95749 300 aa12.95□□□□□ -0.34
LSM2-212ENST00000477182 OR52Z1P0C646 297 aa12.95□□□□□ -0.34
LSM2-212ENST00000477182 TGFB3P10600 412 aa12.95□□□□□ -0.34
LSM2-212ENST00000477182 HOXB8P17481 243 aaPredicted RBP12.95□□□□□ -0.34
LSM2-212ENST00000477182 MARCKSP29966 332 aaPredicted RBP12.95□□□□□ -0.34
LSM2-212ENST00000477182 SETQ01105 290 aaPredicted RBP12.95□□□□□ -0.34
LSM2-212ENST00000477182 SEMA3FQ13275 785 aa12.95□□□□□ -0.34
LSM2-212ENST00000477182 MTMR1Q13613 665 aa12.95□□□□□ -0.34
LSM2-212ENST00000477182 DUSP6Q16828 381 aa12.95□□□□□ -0.34
LSM2-212ENST00000477182 TMEM184AQ6ZMB5 413 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms