RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 AZI2Q9H6S1 392 aa17.59■□□□□ 0.41
SMG5-204ENST00000476954 ARHGEF3Q9NR81 526 aa17.59■□□□□ 0.41
SMG5-204ENST00000476954 USP18Q9UMW8 372 aa17.59■□□□□ 0.41
SMG5-204ENST00000476954 UBIAD1Q9Y5Z9 338 aa17.59■□□□□ 0.41
SMG5-204ENST00000476954 SPDYE4A6NLX3 237 aa17.58■□□□□ 0.4
SMG5-204ENST00000476954 HOXA2O43364 376 aa17.58■□□□□ 0.4
SMG5-204ENST00000476954 CTSAP10619 480 aa17.58■□□□□ 0.4
SMG5-204ENST00000476954 TRAF1Q13077 416 aa17.58■□□□□ 0.4
SMG5-204ENST00000476954 MTMR1Q13613 665 aa17.58■□□□□ 0.4
SMG5-204ENST00000476954 PPM1JQ5JR12 505 aa17.58■□□□□ 0.4
SMG5-204ENST00000476954 ECHDC2Q86YB7 292 aa17.58■□□□□ 0.4
SMG5-204ENST00000476954 TMEM169Q96HH4 297 aa17.58■□□□□ 0.4
SMG5-204ENST00000476954 MYADMQ96S97 322 aa17.58■□□□□ 0.4
SMG5-204ENST00000476954 VN1R3Q9BXE9 311 aa17.58■□□□□ 0.4
SMG5-204ENST00000476954 SENP2Q9HC62 589 aa17.58■□□□□ 0.4
SMG5-204ENST00000476954 JPH1Q9HDC5 661 aaPredicted RBP17.58■□□□□ 0.4
SMG5-204ENST00000476954 STAT5BP51692 787 aa17.57■□□□□ 0.4
SMG5-204ENST00000476954 ACTR2P61160 394 aa17.57■□□□□ 0.4
SMG5-204ENST00000476954 WTAPQ15007 396 aa17.57■□□□□ 0.4
SMG5-204ENST00000476954 ODR4Q5SWX8 454 aa17.57■□□□□ 0.4
SMG5-204ENST00000476954 CYB5R4Q7L1T6 521 aa17.57■□□□□ 0.4
SMG5-204ENST00000476954 GPR161Q8N6U8 529 aaKnown RBP17.57■□□□□ 0.4
SMG5-204ENST00000476954 PJA1Q8NG27 643 aa17.57■□□□□ 0.4
SMG5-204ENST00000476954 SLC9A2Q9UBY0 812 aa17.57■□□□□ 0.4
SMG5-204ENST00000476954 SMG5Q9UPR3 1016 aaKnown RBP17.57■□□□□ 0.4
SMG5-204ENST00000476954 IRAK3Q9Y616 596 aa17.57■□□□□ 0.4
SMG5-204ENST00000476954 VTNP04004 478 aa17.56■□□□□ 0.4
SMG5-204ENST00000476954 MYBP10242 640 aa17.56■□□□□ 0.4
SMG5-204ENST00000476954 CRYBB1P53674 252 aaPredicted RBP17.56■□□□□ 0.4
SMG5-204ENST00000476954 PTPN14Q15678 1187 aa17.56■□□□□ 0.4
SMG5-204ENST00000476954 DCLRE1AQ6PJP8 1040 aa17.56■□□□□ 0.4
SMG5-204ENST00000476954 PLPPR4Q7Z2D5 763 aa17.56■□□□□ 0.4
SMG5-204ENST00000476954 CDHR1Q96JP9 859 aa17.56■□□□□ 0.4
SMG5-204ENST00000476954 SPATA6Q9NWH7 488 aaPredicted RBP17.56■□□□□ 0.4
SMG5-204ENST00000476954 MYH15Q9Y2K3 1946 aa17.55■□□□□ 0.4
SMG5-204ENST00000476954 SPTLC1O15269 473 aa17.55■□□□□ 0.4
SMG5-204ENST00000476954 GPR32O75388 356 aa17.55■□□□□ 0.4
SMG5-204ENST00000476954 ALDH7A1P49419 539 aaKnown RBP17.55■□□□□ 0.4
SMG5-204ENST00000476954 CLCN4P51793 760 aa17.55■□□□□ 0.4
SMG5-204ENST00000476954 CSTF1Q05048 431 aaKnown RBP17.55■□□□□ 0.4
SMG5-204ENST00000476954 BMS1Q14692 1282 aaKnown RBP17.55■□□□□ 0.4
SMG5-204ENST00000476954 DDX53Q86TM3 631 aaKnown RBP17.55■□□□□ 0.4
SMG5-204ENST00000476954 CUL5Q93034 780 aa17.55■□□□□ 0.4
SMG5-204ENST00000476954 KLHL5Q96PQ7 755 aa17.55■□□□□ 0.4
SMG5-204ENST00000476954 ZBTB42B2RXF5 422 aa17.54■□□□□ 0.4
SMG5-204ENST00000476954 PIK3CDO00329 1044 aa17.54■□□□□ 0.4
SMG5-204ENST00000476954 ZC3H11AO75152 810 aaKnown RBP eCLIP17.54■□□□□ 0.4
SMG5-204ENST00000476954 SSBP05455 408 aaKnown RBP eCLIP17.54■□□□□ 0.4
SMG5-204ENST00000476954 NONOQ15233 471 aaKnown RBP eCLIP17.54■□□□□ 0.4
SMG5-204ENST00000476954 FAM43BQ6ZT52 329 aaPredicted RBP17.54■□□□□ 0.4
SMG5-204ENST00000476954 ZNF598Q86UK7 904 aaKnown RBP17.54■□□□□ 0.4
SMG5-204ENST00000476954 TNPO1Q92973 898 aaKnown RBP17.54■□□□□ 0.4
SMG5-204ENST00000476954 IGSF21Q96ID5 467 aa17.54■□□□□ 0.4
SMG5-204ENST00000476954 ZNF668Q96K58 619 aaPredicted RBP17.54■□□□□ 0.4
SMG5-204ENST00000476954 JADE2Q9NQC1 790 aa17.54■□□□□ 0.4
SMG5-204ENST00000476954 EPS15L1Q9UBC2 864 aa17.54■□□□□ 0.4
SMG5-204ENST00000476954 MTF2Q9Y483 593 aaPredicted RBP17.54■□□□□ 0.4
SMG5-204ENST00000476954 DOCK6Q96HP0 2047 aa17.54■□□□□ 0.4
SMG5-204ENST00000476954 LAMTOR5O43504 91 aa17.53■□□□□ 0.4
SMG5-204ENST00000476954 CNPP09543 421 aaKnown RBP17.53■□□□□ 0.4
SMG5-204ENST00000476954 KLRC2P26717 231 aa17.53■□□□□ 0.4
SMG5-204ENST00000476954 NT5C2P49902 561 aa17.53■□□□□ 0.4
SMG5-204ENST00000476954 POLGP54098 1239 aaPredicted RBP17.53■□□□□ 0.4
SMG5-204ENST00000476954 UBE2SQ16763 222 aa17.53■□□□□ 0.4
SMG5-204ENST00000476954 ZNF528Q3MIS6 628 aa17.53■□□□□ 0.4
SMG5-204ENST00000476954 TSSK4Q6SA08 328 aa17.53■□□□□ 0.4
SMG5-204ENST00000476954 C15orf39Q6ZRI6 1047 aa17.53■□□□□ 0.4
SMG5-204ENST00000476954 PPFIBP1Q86W92 1011 aa17.53■□□□□ 0.4
SMG5-204ENST00000476954 ATRIPQ8WXE1 791 aa17.53■□□□□ 0.4
SMG5-204ENST00000476954 KRT23Q9C075 422 aa17.53■□□□□ 0.4
SMG5-204ENST00000476954 EPC1Q9H2F5 836 aa17.53■□□□□ 0.4
SMG5-204ENST00000476954 WDR6Q9NNW5 1121 aaKnown RBP17.53■□□□□ 0.4
SMG5-204ENST00000476954 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.53■□□□□ 0.4
SMG5-204ENST00000476954 CLUHO75153 1309 aa17.52■□□□□ 0.4
SMG5-204ENST00000476954 B4GALT3O60512 393 aa17.52■□□□□ 0.4
SMG5-204ENST00000476954 ZSCAN20P17040 1043 aaPredicted RBP17.52■□□□□ 0.4
SMG5-204ENST00000476954 FGFR4P22455 802 aa17.52■□□□□ 0.4
SMG5-204ENST00000476954 KCNA4P22459 653 aa17.52■□□□□ 0.4
SMG5-204ENST00000476954 PDE1AP54750 535 aa17.52■□□□□ 0.4
SMG5-204ENST00000476954 ITGB3BPQ13352 177 aaPredicted RBP17.52■□□□□ 0.4
SMG5-204ENST00000476954 GIT2Q14161 759 aa17.52■□□□□ 0.4
SMG5-204ENST00000476954 LONRF3Q496Y0 759 aa17.52■□□□□ 0.4
SMG5-204ENST00000476954 ZBTB44Q8NCP5 570 aa17.52■□□□□ 0.4
SMG5-204ENST00000476954 RPP25Q9BUL9 199 aaKnown RBP17.52■□□□□ 0.4
SMG5-204ENST00000476954 MAN1C1Q9NR34 630 aa17.52■□□□□ 0.4
SMG5-204ENST00000476954 SH2B1Q9NRF2 756 aaPredicted RBP17.52■□□□□ 0.4
SMG5-204ENST00000476954 KCNH7Q9NS40 1196 aa17.52■□□□□ 0.4
SMG5-204ENST00000476954 FBXO4Q9UKT5 387 aa17.52■□□□□ 0.4
SMG5-204ENST00000476954 PCDHB15Q9Y5E8 787 aa17.52■□□□□ 0.4
SMG5-204ENST00000476954 PCDHGA2Q9Y5H1 932 aa17.52■□□□□ 0.4
SMG5-204ENST00000476954 CCDC195A0A1B0GUA6 201 aa17.51■□□□□ 0.39
SMG5-204ENST00000476954 HBP1O60381 514 aa17.51■□□□□ 0.39
SMG5-204ENST00000476954 LILRB5O75023 590 aa17.51■□□□□ 0.39
SMG5-204ENST00000476954 C22orf31O95567 290 aa17.51■□□□□ 0.39
SMG5-204ENST00000476954 STARD6P59095 220 aa17.51■□□□□ 0.39
SMG5-204ENST00000476954 SPEM2Q0P670 501 aa17.51■□□□□ 0.39
SMG5-204ENST00000476954 ACAP1Q15027 740 aa17.51■□□□□ 0.39
SMG5-204ENST00000476954 SECISBP2LQ93073 1101 aaKnown RBP17.51■□□□□ 0.39
SMG5-204ENST00000476954 NRDE2Q9H7Z3 1164 aa17.51■□□□□ 0.39
SMG5-204ENST00000476954 SLC2A4RGQ9NR83 387 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms