RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 HEATR3Q7Z4Q2 680 aa12.94□□□□□ -0.34
BRCA1-213ENST00000476777 ECHDC2Q86YB7 292 aa12.94□□□□□ -0.34
BRCA1-213ENST00000476777 ABI1Q8IZP0 508 aa12.94□□□□□ -0.34
BRCA1-213ENST00000476777 PLCD3Q8N3E9 789 aa12.94□□□□□ -0.34
BRCA1-213ENST00000476777 FLCNQ8NFG4 579 aa12.94□□□□□ -0.34
BRCA1-213ENST00000476777 PGBD1Q96JS3 809 aa12.94□□□□□ -0.34
BRCA1-213ENST00000476777 MTA3Q9BTC8 594 aa12.94□□□□□ -0.34
BRCA1-213ENST00000476777 ZNF302Q9NR11 478 aa12.94□□□□□ -0.34
BRCA1-213ENST00000476777 DBR1Q9UK59 544 aaKnown RBP12.94□□□□□ -0.34
BRCA1-213ENST00000476777 SH2B2O14492 632 aaPredicted RBP12.93□□□□□ -0.34
BRCA1-213ENST00000476777 DHX15O43143 795 aaKnown RBP12.93□□□□□ -0.34
BRCA1-213ENST00000476777 CXCL14O95715 111 aa12.93□□□□□ -0.34
BRCA1-213ENST00000476777 EOMESO95936 686 aa12.93□□□□□ -0.34
BRCA1-213ENST00000476777 AOC1P19801 751 aa12.93□□□□□ -0.34
BRCA1-213ENST00000476777 ANGPT1Q15389 498 aa12.93□□□□□ -0.34
BRCA1-213ENST00000476777 TYW1BQ6NUM6 668 aa12.93□□□□□ -0.34
BRCA1-213ENST00000476777 SWSAP1Q6NVH7 229 aa12.93□□□□□ -0.34
BRCA1-213ENST00000476777 CASC1Q6TDU7 716 aa12.93□□□□□ -0.34
BRCA1-213ENST00000476777 NFXL1Q6ZNB6 911 aa12.93□□□□□ -0.34
BRCA1-213ENST00000476777 TMTC3Q6ZXV5 915 aa12.93□□□□□ -0.34
BRCA1-213ENST00000476777 CCDC105Q8IYK2 499 aa12.93□□□□□ -0.34
BRCA1-213ENST00000476777 TMTC2Q8N394 836 aa12.93□□□□□ -0.34
BRCA1-213ENST00000476777 CCDC82Q8N4S0 544 aa12.93□□□□□ -0.34
BRCA1-213ENST00000476777 METTL13Q8N6R0 699 aa12.93□□□□□ -0.34
BRCA1-213ENST00000476777 FEZF2Q8TBJ5 459 aa12.93□□□□□ -0.34
BRCA1-213ENST00000476777 RUFY2Q8WXA3 655 aa12.93□□□□□ -0.34
BRCA1-213ENST00000476777 ADAMTS10Q9H324 1103 aa12.93□□□□□ -0.34
BRCA1-213ENST00000476777 CYP26B1Q9NR63 512 aa12.93□□□□□ -0.34
BRCA1-213ENST00000476777 DZANK1Q9NVP4 752 aa12.93□□□□□ -0.34
BRCA1-213ENST00000476777 CCDC69A6NI79 296 aa12.92□□□□□ -0.34
BRCA1-213ENST00000476777 NT5C1B-RDH14C9J2C7 533 aa12.92□□□□□ -0.34
BRCA1-213ENST00000476777 PRC1O43663 620 aa12.92□□□□□ -0.34
BRCA1-213ENST00000476777 FOSP01100 380 aaPredicted RBP12.92□□□□□ -0.34
BRCA1-213ENST00000476777 EPCAMP16422 314 aa12.92□□□□□ -0.34
BRCA1-213ENST00000476777 ZSCAN20P17040 1043 aaPredicted RBP12.92□□□□□ -0.34
BRCA1-213ENST00000476777 CHMLP26374 656 aa12.92□□□□□ -0.34
BRCA1-213ENST00000476777 METAP2P50579 478 aaKnown RBP eCLIP12.92□□□□□ -0.34
BRCA1-213ENST00000476777 COL9A3Q14050 684 aaPredicted RBP12.92□□□□□ -0.34
BRCA1-213ENST00000476777 WWC2Q6AWC2 1192 aa12.92□□□□□ -0.34
BRCA1-213ENST00000476777 MIS18BP1Q6P0N0 1132 aa12.92□□□□□ -0.34
BRCA1-213ENST00000476777 ZNF598Q86UK7 904 aaKnown RBP12.92□□□□□ -0.34
BRCA1-213ENST00000476777 RAB11FIP4Q86YS3 637 aa12.92□□□□□ -0.34
BRCA1-213ENST00000476777 VPS52Q8N1B4 723 aa12.92□□□□□ -0.34
BRCA1-213ENST00000476777 RNF169Q8NCN4 708 aa12.92□□□□□ -0.34
BRCA1-213ENST00000476777 SLC22A17Q8WUG5 538 aa12.92□□□□□ -0.34
BRCA1-213ENST00000476777 BBXQ8WY36 941 aaPredicted RBP12.92□□□□□ -0.34
BRCA1-213ENST00000476777 ANO3Q9BYT9 981 aa12.92□□□□□ -0.34
BRCA1-213ENST00000476777 RIC8AQ9NPQ8 531 aa12.92□□□□□ -0.34
BRCA1-213ENST00000476777 MAFBQ9Y5Q3 323 aaPredicted RBP12.92□□□□□ -0.34
BRCA1-213ENST00000476777 IRAK3Q9Y616 596 aa12.92□□□□□ -0.34
BRCA1-213ENST00000476777 KMT2BQ9UMN6 2715 aaPredicted RBP12.92□□□□□ -0.34
BRCA1-213ENST00000476777 A0A0U1RQF3 1178 aa12.91□□□□□ -0.34
BRCA1-213ENST00000476777 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.91□□□□□ -0.34
BRCA1-213ENST00000476777 CALM1P0DP23 149 aa12.91□□□□□ -0.34
BRCA1-213ENST00000476777 CALM2P0DP24 149 aa12.91□□□□□ -0.34
BRCA1-213ENST00000476777 CALM3P0DP25 149 aa12.91□□□□□ -0.34
BRCA1-213ENST00000476777 EIF4BP23588 611 aaKnown RBP12.91□□□□□ -0.34
BRCA1-213ENST00000476777 CA8P35219 290 aa12.91□□□□□ -0.34
BRCA1-213ENST00000476777 SREBF1P36956 1147 aa12.91□□□□□ -0.34
BRCA1-213ENST00000476777 ALDH7A1P49419 539 aaKnown RBP12.91□□□□□ -0.34
BRCA1-213ENST00000476777 CLCN3P51790 818 aa12.91□□□□□ -0.34
BRCA1-213ENST00000476777 BCAR1P56945 870 aa12.91□□□□□ -0.34
BRCA1-213ENST00000476777 NLRP11P59045 1033 aaKnown RBP12.91□□□□□ -0.34
BRCA1-213ENST00000476777 TDGQ13569 410 aa12.91□□□□□ -0.34
BRCA1-213ENST00000476777 BMS1Q14692 1282 aaKnown RBP12.91□□□□□ -0.34
BRCA1-213ENST00000476777 TTC22Q5TAA0 569 aa12.91□□□□□ -0.34
BRCA1-213ENST00000476777 NIPA1Q7RTP0 329 aa12.91□□□□□ -0.34
BRCA1-213ENST00000476777 TMEM173Q86WV6 379 aaPredicted RBP12.91□□□□□ -0.34
BRCA1-213ENST00000476777 TEX2Q8IWB9 1127 aa12.91□□□□□ -0.34
BRCA1-213ENST00000476777 LINC01465Q8N7H1 131 aa12.91□□□□□ -0.34
BRCA1-213ENST00000476777 FANCBQ8NB91 859 aa12.91□□□□□ -0.34
BRCA1-213ENST00000476777 DTWD2Q8NBA8 298 aa12.91□□□□□ -0.34
BRCA1-213ENST00000476777 HELQQ8TDG4 1101 aa12.91□□□□□ -0.34
BRCA1-213ENST00000476777 AUTS2Q8WXX7 1259 aa12.91□□□□□ -0.34
BRCA1-213ENST00000476777 MAP4K1Q92918 833 aa12.91□□□□□ -0.34
BRCA1-213ENST00000476777 TMEM169Q96HH4 297 aa12.91□□□□□ -0.34
BRCA1-213ENST00000476777 TMEM87BQ96K49 555 aa12.91□□□□□ -0.34
BRCA1-213ENST00000476777 RTP3Q9BQQ7 232 aa12.91□□□□□ -0.34
BRCA1-213ENST00000476777 ZBP1Q9H171 429 aa12.91□□□□□ -0.34
BRCA1-213ENST00000476777 DENND4AQ7Z401 1863 aa12.91□□□□□ -0.34
BRCA1-213ENST00000476777 MED19A0JLT2 244 aaPredicted RBP12.9□□□□□ -0.34
BRCA1-213ENST00000476777 FAM86B1E9PN63 330 aa12.9□□□□□ -0.34
BRCA1-213ENST00000476777 MAGEB2O15479 319 aa12.9□□□□□ -0.34
BRCA1-213ENST00000476777 SGSM2O43147 1006 aa12.9□□□□□ -0.34
BRCA1-213ENST00000476777 FAM86B2P0C5J1 330 aa12.9□□□□□ -0.34
BRCA1-213ENST00000476777 CTSAP10619 480 aa12.9□□□□□ -0.34
BRCA1-213ENST00000476777 MCM5P33992 734 aa12.9□□□□□ -0.34
BRCA1-213ENST00000476777 LIFRP42702 1097 aa12.9□□□□□ -0.34
BRCA1-213ENST00000476777 NAPAP54920 295 aa12.9□□□□□ -0.34
BRCA1-213ENST00000476777 TMC5Q6UXY8 1006 aa12.9□□□□□ -0.34
BRCA1-213ENST00000476777 OTOP3Q7RTS5 596 aa12.9□□□□□ -0.34
BRCA1-213ENST00000476777 TRMT1LQ7Z2T5 733 aaKnown RBP12.9□□□□□ -0.34
BRCA1-213ENST00000476777 GPR149Q86SP6 731 aa12.9□□□□□ -0.34
BRCA1-213ENST00000476777 CKAP2LQ8IYA6 745 aa12.9□□□□□ -0.34
BRCA1-213ENST00000476777 SIX5Q8N196 739 aa12.9□□□□□ -0.34
BRCA1-213ENST00000476777 SPDYE1Q8NFV5 336 aaPredicted RBP12.9□□□□□ -0.34
BRCA1-213ENST00000476777 RMDN1Q96DB5 314 aa12.9□□□□□ -0.34
BRCA1-213ENST00000476777 MRPL9Q9BYD2 267 aaKnown RBP12.9□□□□□ -0.34
BRCA1-213ENST00000476777 KCNK12Q9HB15 430 aa12.9□□□□□ -0.34
BRCA1-213ENST00000476777 DUSP12Q9UNI6 340 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms