RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 ZMAT4Q9H898 229 aa4.51□□□□□ -1.69
NPHP3-207ENST00000476742 EMC7Q9NPA0 242 aa4.51□□□□□ -1.69
NPHP3-207ENST00000476742 KCMF1Q9P0J7 381 aa4.51□□□□□ -1.69
NPHP3-207ENST00000476742 SAE1Q9UBE0 346 aaPredicted RBP4.51□□□□□ -1.69
NPHP3-207ENST00000476742 SYNPO2Q9UMS6 1093 aa4.51□□□□□ -1.69
NPHP3-207ENST00000476742 APOBEC2Q9Y235 224 aaKnown RBP4.51□□□□□ -1.69
NPHP3-207ENST00000476742 DUSP10Q9Y6W6 482 aa4.51□□□□□ -1.69
NPHP3-207ENST00000476742 ST20-MTHFSA0A0A6YYL1 179 aa4.5□□□□□ -1.69
NPHP3-207ENST00000476742 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.5□□□□□ -1.69
NPHP3-207ENST00000476742 NEMP1O14524 444 aa4.5□□□□□ -1.69
NPHP3-207ENST00000476742 TGM5O43548 720 aa4.5□□□□□ -1.69
NPHP3-207ENST00000476742 PRICKLE3O43900 615 aaPredicted RBP4.5□□□□□ -1.69
NPHP3-207ENST00000476742 DNAJC6O75061 913 aa4.5□□□□□ -1.69
NPHP3-207ENST00000476742 PRPF6O94906 941 aaKnown RBP4.5□□□□□ -1.69
NPHP3-207ENST00000476742 PLATP00750 562 aa4.5□□□□□ -1.69
NPHP3-207ENST00000476742 VIL1P09327 827 aaKnown RBP4.5□□□□□ -1.69
NPHP3-207ENST00000476742 BPIP17213 487 aa4.5□□□□□ -1.69
NPHP3-207ENST00000476742 SESN2P58004 480 aaPredicted RBP4.5□□□□□ -1.69
NPHP3-207ENST00000476742 NOLC1Q14978 699 aaKnown RBP eCLIP4.5□□□□□ -1.69
NPHP3-207ENST00000476742 TERF2Q15554 542 aa4.5□□□□□ -1.69
NPHP3-207ENST00000476742 SLC5A5Q92911 643 aa4.5□□□□□ -1.69
NPHP3-207ENST00000476742 FERMT2Q96AC1 680 aa4.5□□□□□ -1.69
NPHP3-207ENST00000476742 POFUT1Q9H488 388 aa4.5□□□□□ -1.69
NPHP3-207ENST00000476742 MSRAQ9UJ68 235 aa4.5□□□□□ -1.69
NPHP3-207ENST00000476742 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.5□□□□□ -1.69
NPHP3-207ENST00000476742 NOC2LQ9Y3T9 749 aaKnown RBP4.5□□□□□ -1.69
NPHP3-207ENST00000476742 SLC4A7Q9Y6M7 1214 aa4.5□□□□□ -1.69
NPHP3-207ENST00000476742 SBNO2Q9Y2G9 1366 aa4.5□□□□□ -1.69
NPHP3-207ENST00000476742 NPEPPSL1A6NEC2 478 aa4.49□□□□□ -1.69
NPHP3-207ENST00000476742 H2AFYO75367 372 aaKnown RBP4.49□□□□□ -1.69
NPHP3-207ENST00000476742 ZNF888P0CJ79 500 aaPredicted RBP4.49□□□□□ -1.69
NPHP3-207ENST00000476742 CANXP27824 592 aaKnown RBP4.49□□□□□ -1.69
NPHP3-207ENST00000476742 STAT5BP51692 787 aa4.49□□□□□ -1.69
NPHP3-207ENST00000476742 SESN3P58005 492 aa4.49□□□□□ -1.69
NPHP3-207ENST00000476742 KRTAP10-9P60411 292 aa4.49□□□□□ -1.69
NPHP3-207ENST00000476742 PLP2Q04941 152 aa4.49□□□□□ -1.69
NPHP3-207ENST00000476742 MYBPC3Q14896 1274 aa4.49□□□□□ -1.69
NPHP3-207ENST00000476742 PCOLCEQ15113 449 aa4.49□□□□□ -1.69
NPHP3-207ENST00000476742 BROXQ5VW32 411 aa4.49□□□□□ -1.69
NPHP3-207ENST00000476742 TRIM68Q6AZZ1 485 aa4.49□□□□□ -1.69
NPHP3-207ENST00000476742 KIAA1841Q6NSI8 718 aa4.49□□□□□ -1.69
NPHP3-207ENST00000476742 KLHDC10Q6PID8 442 aa4.49□□□□□ -1.69
NPHP3-207ENST00000476742 GLB1LQ6UWU2 654 aa4.49□□□□□ -1.69
NPHP3-207ENST00000476742 FRMD7Q6ZUT3 714 aa4.49□□□□□ -1.69
NPHP3-207ENST00000476742 USP30Q70CQ3 517 aa4.49□□□□□ -1.69
NPHP3-207ENST00000476742 HDGFL2Q7Z4V5 671 aaPredicted RBP4.49□□□□□ -1.69
NPHP3-207ENST00000476742 BMP8AQ7Z5Y6 402 aa4.49□□□□□ -1.69
NPHP3-207ENST00000476742 FILIP1Q7Z7B0 1213 aa4.49□□□□□ -1.69
NPHP3-207ENST00000476742 AFAP1L2Q8N4X5 818 aa4.49□□□□□ -1.69
NPHP3-207ENST00000476742 ATL2Q8NHH9 583 aa4.49□□□□□ -1.69
NPHP3-207ENST00000476742 MYL10Q9BUA6 226 aa4.49□□□□□ -1.69
NPHP3-207ENST00000476742 BDH2Q9BUT1 245 aa4.49□□□□□ -1.69
NPHP3-207ENST00000476742 MRIQ9BWK5 157 aa4.49□□□□□ -1.69
NPHP3-207ENST00000476742 FAM184BQ9ULE4 1060 aa4.49□□□□□ -1.69
NPHP3-207ENST00000476742 VWA7Q9Y334 891 aa4.49□□□□□ -1.69
NPHP3-207ENST00000476742 MRE11P49959 708 aa4.48□□□□□ -1.69
NPHP3-207ENST00000476742 EPHB4P54760 987 aa4.48□□□□□ -1.69
NPHP3-207ENST00000476742 RAC3P60763 192 aa4.48□□□□□ -1.69
NPHP3-207ENST00000476742 FAPQ12884 760 aa4.48□□□□□ -1.69
NPHP3-207ENST00000476742 TBC1D10BQ4KMP7 808 aaPredicted RBP4.48□□□□□ -1.69
NPHP3-207ENST00000476742 AGBL4Q5VU57 503 aa4.48□□□□□ -1.69
NPHP3-207ENST00000476742 SLFN13Q68D06 897 aa4.48□□□□□ -1.69
NPHP3-207ENST00000476742 KANSL1Q7Z3B3 1105 aa4.48□□□□□ -1.69
NPHP3-207ENST00000476742 STRA8Q7Z7C7 330 aa4.48□□□□□ -1.69
NPHP3-207ENST00000476742 RASSF3Q86WH2 238 aa4.48□□□□□ -1.69
NPHP3-207ENST00000476742 OR5AN1Q8NGI8 311 aa4.48□□□□□ -1.69
NPHP3-207ENST00000476742 LPPQ93052 612 aa4.48□□□□□ -1.69
NPHP3-207ENST00000476742 GFM2Q969S9 779 aaKnown RBP4.48□□□□□ -1.69
NPHP3-207ENST00000476742 DYDC2Q96IM9 177 aa4.48□□□□□ -1.69
NPHP3-207ENST00000476742 ZNF496Q96IT1 587 aaPredicted RBP4.48□□□□□ -1.69
NPHP3-207ENST00000476742 HIST1H2AHQ96KK5 128 aa4.48□□□□□ -1.69
NPHP3-207ENST00000476742 HIST1H2AJQ99878 128 aa4.48□□□□□ -1.69
NPHP3-207ENST00000476742 OR10A2Q9H208 303 aa4.48□□□□□ -1.69
NPHP3-207ENST00000476742 SEC61A2Q9H9S3 476 aa4.48□□□□□ -1.69
NPHP3-207ENST00000476742 CNOT11Q9UKZ1 510 aaKnown RBP4.48□□□□□ -1.69
NPHP3-207ENST00000476742 DENND2AQ9ULE3 1009 aa4.48□□□□□ -1.69
NPHP3-207ENST00000476742 PTPN22Q9Y2R2 807 aa4.48□□□□□ -1.69
NPHP3-207ENST00000476742 NR2E1Q9Y466 385 aa4.48□□□□□ -1.69
NPHP3-207ENST00000476742 ARHGAP6O43182 974 aa4.47□□□□□ -1.69
NPHP3-207ENST00000476742 DAPK3O43293 454 aa4.47□□□□□ -1.69
NPHP3-207ENST00000476742 KDM1AO60341 852 aa4.47□□□□□ -1.69
NPHP3-207ENST00000476742 CNOT4O95628 575 aaKnown RBP4.47□□□□□ -1.69
NPHP3-207ENST00000476742 ID4P47928 161 aa4.47□□□□□ -1.69
NPHP3-207ENST00000476742 STAT4Q14765 748 aa4.47□□□□□ -1.69
NPHP3-207ENST00000476742 MAN2A1Q16706 1144 aa4.47□□□□□ -1.69
NPHP3-207ENST00000476742 ZNF827Q17R98 1081 aa4.47□□□□□ -1.69
NPHP3-207ENST00000476742 IQSEC1Q6DN90 963 aa4.47□□□□□ -1.69
NPHP3-207ENST00000476742 LARP4Q71RC2 724 aaKnown RBP eCLIP4.47□□□□□ -1.69
NPHP3-207ENST00000476742 WDR66Q8TBY9 1149 aa4.47□□□□□ -1.69
NPHP3-207ENST00000476742 LMF1Q96S06 567 aa4.47□□□□□ -1.69
NPHP3-207ENST00000476742 NOL10Q9BSC4 688 aaKnown RBP4.47□□□□□ -1.69
NPHP3-207ENST00000476742 WNT8AQ9H1J5 351 aa4.47□□□□□ -1.69
NPHP3-207ENST00000476742 MTG2Q9H4K7 406 aa4.47□□□□□ -1.69
NPHP3-207ENST00000476742 POLR3BQ9NW08 1133 aaPredicted RBP4.47□□□□□ -1.69
NPHP3-207ENST00000476742 PUF60Q9UHX1 559 aaKnown RBP4.47□□□□□ -1.69
NPHP3-207ENST00000476742 MAGEL2Q9UJ55 1249 aa4.47□□□□□ -1.69
NPHP3-207ENST00000476742 MCM8Q9UJA3 840 aa4.47□□□□□ -1.69
NPHP3-207ENST00000476742 MYPNQ86TC9 1320 aa4.46□□□□□ -1.69
NPHP3-207ENST00000476742 A0A0A6YYJ9 748 aa4.46□□□□□ -1.7
NPHP3-207ENST00000476742 K7ESM1 405 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms