RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 SLC9A7Q96T83 725 aa10.81□□□□□ -0.68
HDAC3-208ENST00000476739 PLIN2Q99541 437 aa10.81□□□□□ -0.68
HDAC3-208ENST00000476739 MTRQ99707 1265 aa10.81□□□□□ -0.68
HDAC3-208ENST00000476739 FDXACB1Q9BRP7 624 aaPredicted RBP10.81□□□□□ -0.68
HDAC3-208ENST00000476739 POLD4Q9HCU8 107 aa10.81□□□□□ -0.68
HDAC3-208ENST00000476739 ERVK-5Q9HDB9 667 aa10.81□□□□□ -0.68
HDAC3-208ENST00000476739 GPRC5CQ9NQ84 441 aa10.81□□□□□ -0.68
HDAC3-208ENST00000476739 DDX19AQ9NUU7 478 aaKnown RBP10.81□□□□□ -0.68
HDAC3-208ENST00000476739 TFIP11Q9UBB9 837 aaKnown RBP10.81□□□□□ -0.68
HDAC3-208ENST00000476739 DBR1Q9UK59 544 aaKnown RBP10.81□□□□□ -0.68
HDAC3-208ENST00000476739 ST3GAL5Q9UNP4 418 aa10.81□□□□□ -0.68
HDAC3-208ENST00000476739 SQORQ9Y6N5 450 aa10.81□□□□□ -0.68
HDAC3-208ENST00000476739 RPS6KA5O75582 802 aa10.8□□□□□ -0.68
HDAC3-208ENST00000476739 ARHGEF15O94989 841 aa10.8□□□□□ -0.68
HDAC3-208ENST00000476739 XRCC6P12956 609 aaKnown RBP eCLIP10.8□□□□□ -0.68
HDAC3-208ENST00000476739 DNAJB2P25686 324 aa10.8□□□□□ -0.68
HDAC3-208ENST00000476739 KCNJ6P48051 423 aa10.8□□□□□ -0.68
HDAC3-208ENST00000476739 PAK2Q13177 524 aa10.8□□□□□ -0.68
HDAC3-208ENST00000476739 GRB10Q13322 594 aa10.8□□□□□ -0.68
HDAC3-208ENST00000476739 ZRSR1Q15695 479 aaKnown RBP10.8□□□□□ -0.68
HDAC3-208ENST00000476739 SPECC1Q5M775 1068 aa10.8□□□□□ -0.68
HDAC3-208ENST00000476739 KRT79Q5XKE5 535 aa10.8□□□□□ -0.68
HDAC3-208ENST00000476739 USP49Q70CQ1 688 aa10.8□□□□□ -0.68
HDAC3-208ENST00000476739 MAEAQ7L5Y9 396 aa10.8□□□□□ -0.68
HDAC3-208ENST00000476739 SPRED2Q7Z698 418 aa10.8□□□□□ -0.68
HDAC3-208ENST00000476739 HERC6Q8IVU3 1022 aa10.8□□□□□ -0.68
HDAC3-208ENST00000476739 MYOCDQ8IZQ8 938 aa10.8□□□□□ -0.68
HDAC3-208ENST00000476739 PHOSPHO2Q8TCD6 241 aa10.8□□□□□ -0.68
HDAC3-208ENST00000476739 ASAP3Q8TDY4 903 aa10.8□□□□□ -0.68
HDAC3-208ENST00000476739 PRPF31Q8WWY3 499 aaKnown RBP10.8□□□□□ -0.68
HDAC3-208ENST00000476739 NLRP7Q8WX94 980 aa10.8□□□□□ -0.68
HDAC3-208ENST00000476739 APBB2Q92870 758 aa10.8□□□□□ -0.68
HDAC3-208ENST00000476739 NLRP4Q96MN2 994 aa10.8□□□□□ -0.68
HDAC3-208ENST00000476739 FAM161BQ96MY7 647 aa10.8□□□□□ -0.68
HDAC3-208ENST00000476739 CLIC6Q96NY7 704 aa10.8□□□□□ -0.68
HDAC3-208ENST00000476739 RAB34Q9BZG1 259 aa10.8□□□□□ -0.68
HDAC3-208ENST00000476739 CSRNP2Q9H175 543 aa10.8□□□□□ -0.68
HDAC3-208ENST00000476739 NKX2-4Q9H2Z4 354 aa10.8□□□□□ -0.68
HDAC3-208ENST00000476739 TTYH1Q9H313 450 aaPredicted RBP10.8□□□□□ -0.68
HDAC3-208ENST00000476739 ATP6V0A4Q9HBG4 840 aa10.8□□□□□ -0.68
HDAC3-208ENST00000476739 IFT122Q9HBG6 1241 aa10.8□□□□□ -0.68
HDAC3-208ENST00000476739 FBXO2Q9UK22 296 aaPredicted RBP10.8□□□□□ -0.68
HDAC3-208ENST00000476739 PPME1Q9Y570 386 aa10.8□□□□□ -0.68
HDAC3-208ENST00000476739 LCHNA4D1U4 455 aa10.79□□□□□ -0.68
HDAC3-208ENST00000476739 DGAT1O75907 488 aa10.79□□□□□ -0.68
HDAC3-208ENST00000476739 UPP2O95045 317 aa10.79□□□□□ -0.68
HDAC3-208ENST00000476739 SRGAP2CP0DJJ0 459 aa10.79□□□□□ -0.68
HDAC3-208ENST00000476739 DARSP14868 501 aaKnown RBP10.79□□□□□ -0.68
HDAC3-208ENST00000476739 GLRA2P23416 452 aa10.79□□□□□ -0.68
HDAC3-208ENST00000476739 EIF4BP23588 611 aaKnown RBP10.79□□□□□ -0.68
HDAC3-208ENST00000476739 ARL2P36404 184 aa10.79□□□□□ -0.68
HDAC3-208ENST00000476739 NASPP49321 788 aaPredicted RBP10.79□□□□□ -0.68
HDAC3-208ENST00000476739 DNM2P50570 870 aa10.79□□□□□ -0.68
HDAC3-208ENST00000476739 LAMTOR4Q0VGL1 99 aa10.79□□□□□ -0.68
HDAC3-208ENST00000476739 HYIQ5T013 277 aa10.79□□□□□ -0.68
HDAC3-208ENST00000476739 PADI6Q6TGC4 694 aa10.79□□□□□ -0.68
HDAC3-208ENST00000476739 USP38Q8NB14 1042 aa10.79□□□□□ -0.68
HDAC3-208ENST00000476739 PSPC1Q8WXF1 523 aaKnown RBP10.79□□□□□ -0.68
HDAC3-208ENST00000476739 TOP1MTQ969P6 601 aa10.79□□□□□ -0.68
HDAC3-208ENST00000476739 TIFAQ96CG3 184 aa10.79□□□□□ -0.68
HDAC3-208ENST00000476739 CCDC43Q96MW1 224 aaKnown RBP10.79□□□□□ -0.68
HDAC3-208ENST00000476739 SCLT1Q96NL6 688 aa10.79□□□□□ -0.68
HDAC3-208ENST00000476739 JPH2Q9BR39 696 aaPredicted RBP10.79□□□□□ -0.68
HDAC3-208ENST00000476739 POLR3FQ9H1D9 316 aaPredicted RBP10.79□□□□□ -0.68
HDAC3-208ENST00000476739 BHMT2Q9H2M3 363 aa10.79□□□□□ -0.68
HDAC3-208ENST00000476739 MINDY3Q9H8M7 445 aa10.79□□□□□ -0.68
HDAC3-208ENST00000476739 DAXXQ9UER7 740 aaPredicted RBP10.79□□□□□ -0.68
HDAC3-208ENST00000476739 COL4A3BPQ9Y5P4 624 aa10.79□□□□□ -0.68
HDAC3-208ENST00000476739 TTC3P53804 2025 aa10.79□□□□□ -0.68
HDAC3-208ENST00000476739 GPR182O15218 404 aa10.78□□□□□ -0.68
HDAC3-208ENST00000476739 EFCAB14O75071 495 aa10.78□□□□□ -0.68
HDAC3-208ENST00000476739 GJB5O95377 273 aa10.78□□□□□ -0.68
HDAC3-208ENST00000476739 EYA4O95677 639 aa10.78□□□□□ -0.68
HDAC3-208ENST00000476739 BRD1O95696 1058 aa10.78□□□□□ -0.68
HDAC3-208ENST00000476739 BMP15O95972 392 aa10.78□□□□□ -0.68
HDAC3-208ENST00000476739 AMHP03971 560 aa10.78□□□□□ -0.68
HDAC3-208ENST00000476739 CA3P07451 260 aa10.78□□□□□ -0.68
HDAC3-208ENST00000476739 MUTP22033 750 aa10.78□□□□□ -0.68
HDAC3-208ENST00000476739 BECN1Q14457 450 aa10.78□□□□□ -0.68
HDAC3-208ENST00000476739 DSC3Q14574 896 aa10.78□□□□□ -0.68
HDAC3-208ENST00000476739 SLC39A14Q15043 492 aa10.78□□□□□ -0.68
HDAC3-208ENST00000476739 TMEM119Q4V9L6 283 aa10.78□□□□□ -0.68
HDAC3-208ENST00000476739 CABP7Q86V35 215 aa10.78□□□□□ -0.68
HDAC3-208ENST00000476739 ZNF410Q86VK4 478 aa10.78□□□□□ -0.68
HDAC3-208ENST00000476739 CRIPAKQ8N1N5 446 aa10.78□□□□□ -0.68
HDAC3-208ENST00000476739 RNF149Q8NC42 400 aa10.78□□□□□ -0.68
HDAC3-208ENST00000476739 LINC00301Q8NCQ3 95 aa10.78□□□□□ -0.68
HDAC3-208ENST00000476739 BSNDQ8WZ55 320 aa10.78□□□□□ -0.68
HDAC3-208ENST00000476739 EPSTI1Q96J88 318 aa10.78□□□□□ -0.68
HDAC3-208ENST00000476739 AK8Q96MA6 479 aa10.78□□□□□ -0.68
HDAC3-208ENST00000476739 RUSC1Q9BVN2 902 aa10.78□□□□□ -0.68
HDAC3-208ENST00000476739 TSPYL2Q9H2G4 693 aaPredicted RBP10.78□□□□□ -0.68
HDAC3-208ENST00000476739 SEMA6BQ9H3T3 888 aa10.78□□□□□ -0.68
HDAC3-208ENST00000476739 PCDHA11Q9Y5I1 949 aa10.78□□□□□ -0.68
HDAC3-208ENST00000476739 SRPRBQ9Y5M8 271 aaKnown RBP10.78□□□□□ -0.68
HDAC3-208ENST00000476739 STK24Q9Y6E0 443 aa10.78□□□□□ -0.68
HDAC3-208ENST00000476739 LAMA2P24043 3122 aaKnown RBP10.78□□□□□ -0.68
HDAC3-208ENST00000476739 COL4A6Q14031 1691 aa10.77□□□□□ -0.69
HDAC3-208ENST00000476739 ARHGEF35A5YM69 484 aa10.77□□□□□ -0.69
HDAC3-208ENST00000476739 TLL1O43897 1013 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms