RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 EFCAB12Q6NXP0 572 aa18.18■□□□□ 0.5
COL1A1-205ENST00000476387 FAM228AQ86W67 206 aa18.18■□□□□ 0.5
COL1A1-205ENST00000476387 FAM178BQ8IXR5 827 aa18.18■□□□□ 0.5
COL1A1-205ENST00000476387 SLFN12Q8IYM2 578 aa18.18■□□□□ 0.5
COL1A1-205ENST00000476387 TBC1D32Q96NH3 1257 aa18.18■□□□□ 0.5
COL1A1-205ENST00000476387 FAM50BQ9Y247 325 aa18.18■□□□□ 0.5
COL1A1-205ENST00000476387 ARID2Q68CP9 1835 aa18.18■□□□□ 0.5
COL1A1-205ENST00000476387 FAM189BP81408 668 aa18.17■□□□□ 0.5
COL1A1-205ENST00000476387 PPP2R5CQ13362 524 aa18.17■□□□□ 0.5
COL1A1-205ENST00000476387 CTC1Q2NKJ3 1217 aa18.17■□□□□ 0.5
COL1A1-205ENST00000476387 B3GNT9Q6UX72 402 aa18.17■□□□□ 0.5
COL1A1-205ENST00000476387 PPP1R16BQ96T49 567 aa18.17■□□□□ 0.5
COL1A1-205ENST00000476387 ADAMTS10Q9H324 1103 aa18.17■□□□□ 0.5
COL1A1-205ENST00000476387 ELAC1Q9H777 363 aaKnown RBP18.17■□□□□ 0.5
COL1A1-205ENST00000476387 SEPT9Q9UHD8 586 aaPredicted RBP18.17■□□□□ 0.5
COL1A1-205ENST00000476387 AKT3Q9Y243 479 aa18.17■□□□□ 0.5
COL1A1-205ENST00000476387 KIF3AQ9Y496 699 aa18.17■□□□□ 0.5
COL1A1-205ENST00000476387 ATG2AQ2TAZ0 1938 aa18.17■□□□□ 0.5
COL1A1-205ENST00000476387 H3BQ06 376 aaPredicted RBP18.16■□□□□ 0.5
COL1A1-205ENST00000476387 NEMFO60524 1076 aa18.16■□□□□ 0.5
COL1A1-205ENST00000476387 ITGB1P05556 798 aa18.16■□□□□ 0.5
COL1A1-205ENST00000476387 COL9A1P20849 921 aa18.16■□□□□ 0.5
COL1A1-205ENST00000476387 NLRP11P59045 1033 aaKnown RBP18.16■□□□□ 0.5
COL1A1-205ENST00000476387 HYAL1Q12794 435 aa18.16■□□□□ 0.5
COL1A1-205ENST00000476387 CAMK1Q14012 370 aa18.16■□□□□ 0.5
COL1A1-205ENST00000476387 DSC3Q14574 896 aa18.16■□□□□ 0.5
COL1A1-205ENST00000476387 TARBP2Q15633 366 aaKnown RBP18.16■□□□□ 0.5
COL1A1-205ENST00000476387 KLHL23Q8NBE8 558 aa18.16■□□□□ 0.5
COL1A1-205ENST00000476387 SPPL3Q8TCT6 385 aa18.16■□□□□ 0.5
COL1A1-205ENST00000476387 PPP2R3CQ969Q6 453 aa18.16■□□□□ 0.5
COL1A1-205ENST00000476387 ALG13Q9NP73 1137 aaKnown RBP18.16■□□□□ 0.5
COL1A1-205ENST00000476387 TMEM161AQ9NX61 479 aa18.16■□□□□ 0.5
COL1A1-205ENST00000476387 CLDND1Q9NY35 253 aa18.16■□□□□ 0.5
COL1A1-205ENST00000476387 VAV3Q9UKW4 847 aa18.16■□□□□ 0.5
COL1A1-205ENST00000476387 KIAA1671Q9BY89 1806 aa18.15■□□□□ 0.5
COL1A1-205ENST00000476387 DKC1O60832 514 aaKnown RBP eCLIP18.15■□□□□ 0.5
COL1A1-205ENST00000476387 IL9P15248 144 aa18.15■□□□□ 0.5
COL1A1-205ENST00000476387 EIF4BP23588 611 aaKnown RBP18.15■□□□□ 0.5
COL1A1-205ENST00000476387 MCM2P49736 904 aa18.15■□□□□ 0.5
COL1A1-205ENST00000476387 GATMP50440 423 aa18.15■□□□□ 0.5
COL1A1-205ENST00000476387 PSMC5P62195 406 aa18.15■□□□□ 0.5
COL1A1-205ENST00000476387 TBC1D8BQ0IIM8 1120 aa18.15■□□□□ 0.5
COL1A1-205ENST00000476387 CALCRLQ16602 461 aa18.15■□□□□ 0.5
COL1A1-205ENST00000476387 XKR3Q5GH77 459 aa18.15■□□□□ 0.5
COL1A1-205ENST00000476387 NCAPH2Q6IBW4 605 aa18.15■□□□□ 0.5
COL1A1-205ENST00000476387 EP400NLQ6ZTU2 488 aa18.15■□□□□ 0.5
COL1A1-205ENST00000476387 LRRC71Q8N4P6 559 aa18.15■□□□□ 0.5
COL1A1-205ENST00000476387 FBXO18Q8NFZ0 1043 aa18.15■□□□□ 0.5
COL1A1-205ENST00000476387 HAS1Q92839 578 aa18.15■□□□□ 0.5
COL1A1-205ENST00000476387 NIFKQ9BYG3 293 aaKnown RBP18.15■□□□□ 0.5
COL1A1-205ENST00000476387 ATP6V0A4Q9HBG4 840 aa18.15■□□□□ 0.5
COL1A1-205ENST00000476387 AAASQ9NRG9 546 aa18.15■□□□□ 0.5
COL1A1-205ENST00000476387 PCDHB12Q9Y5F1 795 aa18.15■□□□□ 0.5
COL1A1-205ENST00000476387 TBKBP1A7MCY6 615 aa18.14■□□□□ 0.49
COL1A1-205ENST00000476387 EML1O00423 815 aa18.14■□□□□ 0.49
COL1A1-205ENST00000476387 ATP2B1P20020 1258 aa18.14■□□□□ 0.49
COL1A1-205ENST00000476387 DNAJB1P25685 340 aa18.14■□□□□ 0.49
COL1A1-205ENST00000476387 LTBRP36941 435 aa18.14■□□□□ 0.49
COL1A1-205ENST00000476387 GPC3P51654 580 aa18.14■□□□□ 0.49
COL1A1-205ENST00000476387 CDC42EP1Q00587 391 aa18.14■□□□□ 0.49
COL1A1-205ENST00000476387 UBE3AQ05086 875 aa18.14■□□□□ 0.49
COL1A1-205ENST00000476387 CSPP1Q1MSJ5 1256 aa18.14■□□□□ 0.49
COL1A1-205ENST00000476387 MTERF2Q49AM1 385 aa18.14■□□□□ 0.49
COL1A1-205ENST00000476387 GJD3Q8N144 294 aa18.14■□□□□ 0.49
COL1A1-205ENST00000476387 FOXP1Q9H334 677 aaPredicted RBP18.14■□□□□ 0.49
COL1A1-205ENST00000476387 CD320Q9NPF0 282 aa18.14■□□□□ 0.49
COL1A1-205ENST00000476387 PRKAG3Q9UGI9 489 aa18.14■□□□□ 0.49
COL1A1-205ENST00000476387 HOXA2O43364 376 aa18.13■□□□□ 0.49
COL1A1-205ENST00000476387 STBD1O95210 358 aa18.13■□□□□ 0.49
COL1A1-205ENST00000476387 P4HBP07237 508 aaKnown RBP18.13■□□□□ 0.49
COL1A1-205ENST00000476387 DARSP14868 501 aaKnown RBP18.13■□□□□ 0.49
COL1A1-205ENST00000476387 IBSPP21815 317 aaPredicted RBP18.13■□□□□ 0.49
COL1A1-205ENST00000476387 QARSP47897 775 aaKnown RBP18.13■□□□□ 0.49
COL1A1-205ENST00000476387 FAM102BQ5T8I3 360 aa18.13■□□□□ 0.49
COL1A1-205ENST00000476387 POF1BQ8WVV4 589 aa18.13■□□□□ 0.49
COL1A1-205ENST00000476387 TMX3Q96JJ7 454 aa18.13■□□□□ 0.49
COL1A1-205ENST00000476387 CEP89Q96ST8 783 aa18.13■□□□□ 0.49
COL1A1-205ENST00000476387 EPHX3Q9H6B9 360 aa18.13■□□□□ 0.49
COL1A1-205ENST00000476387 FNDC1Q4ZHG4 1894 aaPredicted RBP18.13■□□□□ 0.49
COL1A1-205ENST00000476387 IGKV6-21A0A0C4DH24 114 aa18.12■□□□□ 0.49
COL1A1-205ENST00000476387 DDX11L8A8MPP1 907 aa18.12■□□□□ 0.49
COL1A1-205ENST00000476387 PI4K2BG5E9Z4 385 aa18.12■□□□□ 0.49
COL1A1-205ENST00000476387 CD2BP2O95400 341 aaKnown RBP18.12■□□□□ 0.49
COL1A1-205ENST00000476387 ZSCAN20P17040 1043 aaPredicted RBP18.12■□□□□ 0.49
COL1A1-205ENST00000476387 EPHA7Q15375 998 aa18.12■□□□□ 0.49
COL1A1-205ENST00000476387 SPOUT1Q5T280 376 aaKnown RBP18.12■□□□□ 0.49
COL1A1-205ENST00000476387 NOSTRINQ8IVI9 506 aa18.12■□□□□ 0.49
COL1A1-205ENST00000476387 SCLT1Q96NL6 688 aa18.12■□□□□ 0.49
COL1A1-205ENST00000476387 LXNQ9BS40 222 aa18.12■□□□□ 0.49
COL1A1-205ENST00000476387 TMEM117Q9H0C3 514 aa18.12■□□□□ 0.49
COL1A1-205ENST00000476387 TYW1Q9NV66 732 aaKnown RBP18.12■□□□□ 0.49
COL1A1-205ENST00000476387 PCDHA12Q9UN75 941 aa18.12■□□□□ 0.49
COL1A1-205ENST00000476387 FGFR1P11362 822 aa18.11■□□□□ 0.49
COL1A1-205ENST00000476387 LAG3P18627 525 aa18.11■□□□□ 0.49
COL1A1-205ENST00000476387 SSTR3P32745 418 aaPredicted RBP18.11■□□□□ 0.49
COL1A1-205ENST00000476387 MCM7P33993 719 aa18.11■□□□□ 0.49
COL1A1-205ENST00000476387 DNM2P50570 870 aa18.11■□□□□ 0.49
COL1A1-205ENST00000476387 ADAM15Q13444 863 aa18.11■□□□□ 0.49
COL1A1-205ENST00000476387 EFHBQ8N7U6 833 aa18.11■□□□□ 0.49
COL1A1-205ENST00000476387 COLGALT1Q8NBJ5 622 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms