RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 NPY5RQ15761 445 aa14.82□□□□□ -0.04
MRPL55-228ENST00000476267 PDE12Q6L8Q7 609 aaKnown RBP14.82□□□□□ -0.04
MRPL55-228ENST00000476267 ZNF598Q86UK7 904 aaKnown RBP14.82□□□□□ -0.04
MRPL55-228ENST00000476267 ZNF710Q8N1W2 664 aa14.82□□□□□ -0.04
MRPL55-228ENST00000476267 MRPS27Q92552 414 aaKnown RBP14.82□□□□□ -0.04
MRPL55-228ENST00000476267 EDAQ92838 391 aa14.82□□□□□ -0.04
MRPL55-228ENST00000476267 GJA10Q969M2 543 aa14.82□□□□□ -0.04
MRPL55-228ENST00000476267 CCDC136Q96JN2 1154 aa14.82□□□□□ -0.04
MRPL55-228ENST00000476267 CDCA3Q99618 268 aaPredicted RBP14.82□□□□□ -0.04
MRPL55-228ENST00000476267 SLC26A6Q9BXS9 759 aa14.82□□□□□ -0.04
MRPL55-228ENST00000476267 UNC45AQ9H3U1 944 aa14.82□□□□□ -0.04
MRPL55-228ENST00000476267 TLE6Q9H808 572 aa14.82□□□□□ -0.04
MRPL55-228ENST00000476267 NCOA5Q9HCD5 579 aaKnown RBP14.82□□□□□ -0.04
MRPL55-228ENST00000476267 SH3GLB2Q9NR46 395 aa14.82□□□□□ -0.04
MRPL55-228ENST00000476267 CYP3A7-CYP3A51PA0A087WV96 503 aa14.81□□□□□ -0.04
MRPL55-228ENST00000476267 IGKV6-21A0A0C4DH24 114 aa14.81□□□□□ -0.04
MRPL55-228ENST00000476267 FSD2A1L4K1 749 aa14.81□□□□□ -0.04
MRPL55-228ENST00000476267 DARSP14868 501 aaKnown RBP14.81□□□□□ -0.04
MRPL55-228ENST00000476267 CYP3A7P24462 503 aa14.81□□□□□ -0.04
MRPL55-228ENST00000476267 SFNP31947 248 aa14.81□□□□□ -0.04
MRPL55-228ENST00000476267 DRP2Q13474 957 aa14.81□□□□□ -0.04
MRPL55-228ENST00000476267 Q4G0T1 1027 aa14.81□□□□□ -0.04
MRPL55-228ENST00000476267 CLLU1OSQ5K130 101 aa14.81□□□□□ -0.04
MRPL55-228ENST00000476267 ECHDC2Q86YB7 292 aa14.81□□□□□ -0.04
MRPL55-228ENST00000476267 THNSL1Q8IYQ7 743 aa14.81□□□□□ -0.04
MRPL55-228ENST00000476267 MBOAT7Q96N66 472 aa14.81□□□□□ -0.04
MRPL55-228ENST00000476267 MAP7D2Q96T17 732 aa14.81□□□□□ -0.04
MRPL55-228ENST00000476267 S1PR5Q9H228 398 aa14.81□□□□□ -0.04
MRPL55-228ENST00000476267 AKT3Q9Y243 479 aa14.81□□□□□ -0.04
MRPL55-228ENST00000476267 SAMM50Q9Y512 469 aa14.81□□□□□ -0.04
MRPL55-228ENST00000476267 ZNF318Q5VUA4 2279 aa14.81□□□□□ -0.04
MRPL55-228ENST00000476267 A0A0U1RQF3 1178 aa14.8□□□□□ -0.04
MRPL55-228ENST00000476267 HOXA2O43364 376 aa14.8□□□□□ -0.04
MRPL55-228ENST00000476267 TMOD1P28289 359 aa14.8□□□□□ -0.04
MRPL55-228ENST00000476267 PBX3P40426 434 aa14.8□□□□□ -0.04
MRPL55-228ENST00000476267 CCT2P78371 535 aaKnown RBP14.8□□□□□ -0.04
MRPL55-228ENST00000476267 SPOUT1Q5T280 376 aaKnown RBP14.8□□□□□ -0.04
MRPL55-228ENST00000476267 LRCH2Q5VUJ6 765 aa14.8□□□□□ -0.04
MRPL55-228ENST00000476267 KCNT2Q6UVM3 1135 aa14.8□□□□□ -0.04
MRPL55-228ENST00000476267 BMP8AQ7Z5Y6 402 aa14.8□□□□□ -0.04
MRPL55-228ENST00000476267 LRRC43Q8N309 656 aa14.8□□□□□ -0.04
MRPL55-228ENST00000476267 DAGLBQ8NCG7 672 aa14.8□□□□□ -0.04
MRPL55-228ENST00000476267 RDM1Q8NG50 284 aa14.8□□□□□ -0.04
MRPL55-228ENST00000476267 TBCKQ8TEA7 893 aa14.8□□□□□ -0.04
MRPL55-228ENST00000476267 ZNF668Q96K58 619 aaPredicted RBP14.8□□□□□ -0.04
MRPL55-228ENST00000476267 FBXL18Q96ME1 805 aa14.8□□□□□ -0.04
MRPL55-228ENST00000476267 PHF7Q9BWX1 381 aaPredicted RBP14.8□□□□□ -0.04
MRPL55-228ENST00000476267 NIFKQ9BYG3 293 aaKnown RBP14.8□□□□□ -0.04
MRPL55-228ENST00000476267 ZSWIM6Q9HCJ5 1215 aa14.8□□□□□ -0.04
MRPL55-228ENST00000476267 NRBP2Q9NSY0 501 aa14.8□□□□□ -0.04
MRPL55-228ENST00000476267 TCEAL9Q9UHQ7 104 aa14.8□□□□□ -0.04
MRPL55-228ENST00000476267 HIDE1A8MVS5 230 aa14.79□□□□□ -0.04
MRPL55-228ENST00000476267 EPB41L2O43491 1005 aaKnown RBP14.79□□□□□ -0.04
MRPL55-228ENST00000476267 CHMP2AO43633 222 aa14.79□□□□□ -0.04
MRPL55-228ENST00000476267 GAS7O60861 476 aa14.79□□□□□ -0.04
MRPL55-228ENST00000476267 TECTAO75443 2155 aa14.79□□□□□ -0.04
MRPL55-228ENST00000476267 TDP2O95551 362 aa14.79□□□□□ -0.04
MRPL55-228ENST00000476267 FGFR4P22455 802 aa14.79□□□□□ -0.04
MRPL55-228ENST00000476267 PSMA5P28066 241 aa14.79□□□□□ -0.04
MRPL55-228ENST00000476267 JAK3P52333 1124 aa14.79□□□□□ -0.04
MRPL55-228ENST00000476267 AKAP17AQ02040 695 aaKnown RBP14.79□□□□□ -0.04
MRPL55-228ENST00000476267 NHLH1Q02575 133 aa14.79□□□□□ -0.04
MRPL55-228ENST00000476267 PLPP4Q5VZY2 271 aa14.79□□□□□ -0.04
MRPL55-228ENST00000476267 SYCE2Q6PIF2 218 aa14.79□□□□□ -0.04
MRPL55-228ENST00000476267 RUFY3Q7L099 469 aa14.79□□□□□ -0.04
MRPL55-228ENST00000476267 ETNPPLQ8TBG4 499 aa14.79□□□□□ -0.04
MRPL55-228ENST00000476267 MICAL1Q8TDZ2 1067 aa14.79□□□□□ -0.04
MRPL55-228ENST00000476267 TEKT3Q9BXF9 490 aa14.79□□□□□ -0.04
MRPL55-228ENST00000476267 PCDHA4Q9UN74 947 aa14.79□□□□□ -0.04
MRPL55-228ENST00000476267 TMEM150BA6NC51 233 aa14.78□□□□□ -0.04
MRPL55-228ENST00000476267 ZSCAN20P17040 1043 aaPredicted RBP14.78□□□□□ -0.04
MRPL55-228ENST00000476267 PPM1AP35813 382 aa14.78□□□□□ -0.04
MRPL55-228ENST00000476267 ZXDAP98168 799 aa14.78□□□□□ -0.04
MRPL55-228ENST00000476267 ANKRD54Q6NXT1 300 aa14.78□□□□□ -0.04
MRPL55-228ENST00000476267 MOXD1Q6UVY6 613 aa14.78□□□□□ -0.04
MRPL55-228ENST00000476267 TRIM67Q6ZTA4 783 aa14.78□□□□□ -0.04
MRPL55-228ENST00000476267 SLC39A11Q8N1S5 342 aa14.78□□□□□ -0.04
MRPL55-228ENST00000476267 ZNF558Q96NG5 402 aa14.78□□□□□ -0.04
MRPL55-228ENST00000476267 TCF25Q9BQ70 676 aa14.78□□□□□ -0.04
MRPL55-228ENST00000476267 TRAIPQ9BWF2 469 aa14.78□□□□□ -0.04
MRPL55-228ENST00000476267 NGRNQ9NPE2 291 aaKnown RBP14.78□□□□□ -0.04
MRPL55-228ENST00000476267 ARID2Q68CP9 1835 aa14.78□□□□□ -0.04
MRPL55-228ENST00000476267 USP34Q70CQ2 3546 aa14.78□□□□□ -0.04
MRPL55-228ENST00000476267 CSDE1O75534 798 aaKnown RBP14.77□□□□□ -0.05
MRPL55-228ENST00000476267 REC8O95072 547 aa14.77□□□□□ -0.05
MRPL55-228ENST00000476267 EOMESO95936 686 aa14.77□□□□□ -0.05
MRPL55-228ENST00000476267 NLRP5P59047 1200 aa14.77□□□□□ -0.05
MRPL55-228ENST00000476267 TBC1D8BQ0IIM8 1120 aa14.77□□□□□ -0.05
MRPL55-228ENST00000476267 ALYREFQ86V81 257 aaKnown RBP14.77□□□□□ -0.05
MRPL55-228ENST00000476267 FAM177A1Q8N128 213 aaPredicted RBP14.77□□□□□ -0.05
MRPL55-228ENST00000476267 ZNF274Q96GC6 653 aaPredicted RBP14.77□□□□□ -0.05
MRPL55-228ENST00000476267 MFSD14AQ96MC6 490 aa14.77□□□□□ -0.05
MRPL55-228ENST00000476267 AIFM3Q96NN9 605 aa14.77□□□□□ -0.05
MRPL55-228ENST00000476267 C22orf23Q9BZE7 217 aa14.77□□□□□ -0.05
MRPL55-228ENST00000476267 DENND4AQ7Z401 1863 aa14.76□□□□□ -0.05
MRPL55-228ENST00000476267 TMEM221A6NGB7 291 aa14.76□□□□□ -0.05
MRPL55-228ENST00000476267 M0R296 226 aa14.76□□□□□ -0.05
MRPL55-228ENST00000476267 MAFO75444 373 aaPredicted RBP14.76□□□□□ -0.05
MRPL55-228ENST00000476267 DEXIO95424 95 aa14.76□□□□□ -0.05
MRPL55-228ENST00000476267 MTERF2Q49AM1 385 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms