RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 NGRNQ9NPE2 291 aaKnown RBP5.13□□□□□ -1.59
VPS13D-207ENST00000476169 DDX21Q9NR30 783 aaKnown RBP eCLIP5.13□□□□□ -1.59
VPS13D-207ENST00000476169 UBA6A0AVT1 1052 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-207ENST00000476169 PQBP1O60828 265 aaKnown RBP5.12□□□□□ -1.59
VPS13D-207ENST00000476169 ZBTB7AO95365 584 aa5.12□□□□□ -1.59
VPS13D-207ENST00000476169 IGHA1P01876 353 aa5.12□□□□□ -1.59
VPS13D-207ENST00000476169 CLEC2LP0C7M8 214 aa5.12□□□□□ -1.59
VPS13D-207ENST00000476169 RHCEP18577 417 aa5.12□□□□□ -1.59
VPS13D-207ENST00000476169 CD97P48960 835 aa5.12□□□□□ -1.59
VPS13D-207ENST00000476169 MANFP55145 182 aaKnown RBP5.12□□□□□ -1.59
VPS13D-207ENST00000476169 HERVK_113P62684 666 aa5.12□□□□□ -1.59
VPS13D-207ENST00000476169 SRSF2Q01130 221 aaKnown RBP5.12□□□□□ -1.59
VPS13D-207ENST00000476169 RHDQ02161 417 aa5.12□□□□□ -1.59
VPS13D-207ENST00000476169 FSCN1Q16658 493 aaKnown RBP5.12□□□□□ -1.59
VPS13D-207ENST00000476169 UGT8Q16880 541 aa5.12□□□□□ -1.59
VPS13D-207ENST00000476169 PAN2Q504Q3 1202 aaKnown RBP5.12□□□□□ -1.59
VPS13D-207ENST00000476169 CT83Q5H943 113 aa5.12□□□□□ -1.59
VPS13D-207ENST00000476169 TOR2AQ5JU69 321 aa5.12□□□□□ -1.59
VPS13D-207ENST00000476169 TIGD7Q6NT04 549 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-207ENST00000476169 CCDC62Q6P9F0 684 aa5.12□□□□□ -1.59
VPS13D-207ENST00000476169 NFXL1Q6ZNB6 911 aa5.12□□□□□ -1.59
VPS13D-207ENST00000476169 PHYKPLQ8IUZ5 450 aa5.12□□□□□ -1.59
VPS13D-207ENST00000476169 MIER2Q8N344 545 aa5.12□□□□□ -1.59
VPS13D-207ENST00000476169 PDILTQ8N807 584 aa5.12□□□□□ -1.59
VPS13D-207ENST00000476169 JADE3Q92613 823 aa5.12□□□□□ -1.59
VPS13D-207ENST00000476169 FERMT2Q96AC1 680 aa5.12□□□□□ -1.59
VPS13D-207ENST00000476169 SHISA4Q96DD7 197 aa5.12□□□□□ -1.59
VPS13D-207ENST00000476169 ORAI2Q96SN7 254 aa5.12□□□□□ -1.59
VPS13D-207ENST00000476169 SELENOOQ9BVL4 669 aa5.12□□□□□ -1.59
VPS13D-207ENST00000476169 PDGFDQ9GZP0 370 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-207ENST00000476169 QRSL1Q9H0R6 528 aaKnown RBP5.12□□□□□ -1.59
VPS13D-207ENST00000476169 CSRNP2Q9H175 543 aa5.12□□□□□ -1.59
VPS13D-207ENST00000476169 SEMA4AQ9H3S1 761 aa5.12□□□□□ -1.59
VPS13D-207ENST00000476169 MBNL3Q9NUK0 354 aaKnown RBP5.12□□□□□ -1.59
VPS13D-207ENST00000476169 ADAMTS6Q9UKP5 1117 aa5.12□□□□□ -1.59
VPS13D-207ENST00000476169 DNM3Q9UQ16 869 aa5.12□□□□□ -1.59
VPS13D-207ENST00000476169 GPR45Q9Y5Y3 372 aa5.12□□□□□ -1.59
VPS13D-207ENST00000476169 SCINQ9Y6U3 715 aa5.12□□□□□ -1.59
VPS13D-207ENST00000476169 ABHD14A-ACY1A0A1B0GW23 586 aa5.11□□□□□ -1.59
VPS13D-207ENST00000476169 PRAMEF22A3QJZ6 481 aa5.11□□□□□ -1.59
VPS13D-207ENST00000476169 KIAA1324LA8MWY0 1029 aaPredicted RBP5.11□□□□□ -1.59
VPS13D-207ENST00000476169 NUDT19A8MXV4 375 aa5.11□□□□□ -1.59
VPS13D-207ENST00000476169 TPP1O14773 563 aa5.11□□□□□ -1.59
VPS13D-207ENST00000476169 APOL3O95236 402 aa5.11□□□□□ -1.59
VPS13D-207ENST00000476169 FAHP16930 419 aa5.11□□□□□ -1.59
VPS13D-207ENST00000476169 SARSP49591 514 aaKnown RBP5.11□□□□□ -1.59
VPS13D-207ENST00000476169 MOGSQ13724 837 aa5.11□□□□□ -1.59
VPS13D-207ENST00000476169 NR1I3Q14994 352 aa5.11□□□□□ -1.59
VPS13D-207ENST00000476169 LLGL1Q15334 1064 aa5.11□□□□□ -1.59
VPS13D-207ENST00000476169 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.11□□□□□ -1.59
VPS13D-207ENST00000476169 TTC38Q5R3I4 469 aa5.11□□□□□ -1.59
VPS13D-207ENST00000476169 PRAMEF18Q5VWM3 479 aa5.11□□□□□ -1.59
VPS13D-207ENST00000476169 CILP2Q8IUL8 1156 aa5.11□□□□□ -1.59
VPS13D-207ENST00000476169 TP53INP2Q8IXH6 220 aa5.11□□□□□ -1.59
VPS13D-207ENST00000476169 GRAMD1CQ8IYS0 662 aa5.11□□□□□ -1.59
VPS13D-207ENST00000476169 CAMKK1Q8N5S9 505 aa5.11□□□□□ -1.59
VPS13D-207ENST00000476169 AGBL5Q8NDL9 886 aa5.11□□□□□ -1.59
VPS13D-207ENST00000476169 SLC35G2Q8TBE7 412 aa5.11□□□□□ -1.59
VPS13D-207ENST00000476169 SSH1Q8WYL5 1049 aa5.11□□□□□ -1.59
VPS13D-207ENST00000476169 EAF2Q96CJ1 260 aaPredicted RBP5.11□□□□□ -1.59
VPS13D-207ENST00000476169 TAAR9Q96RI9 348 aa5.11□□□□□ -1.59
VPS13D-207ENST00000476169 TUBGCP5Q96RT8 1024 aa5.11□□□□□ -1.59
VPS13D-207ENST00000476169 RC3H2Q9HBD1 1191 aaKnown RBP5.11□□□□□ -1.59
VPS13D-207ENST00000476169 EDARQ9UNE0 448 aa5.11□□□□□ -1.59
VPS13D-207ENST00000476169 CTNND2Q9UQB3 1225 aa5.11□□□□□ -1.59
VPS13D-207ENST00000476169 ASB1Q9Y576 335 aa5.11□□□□□ -1.59
VPS13D-207ENST00000476169 PCDHGB6Q9Y5F9 930 aa5.11□□□□□ -1.59
VPS13D-207ENST00000476169 RPS6KL1Q9Y6S9 549 aa5.11□□□□□ -1.59
VPS13D-207ENST00000476169 GOLGA6L22H0YM25 854 aa5.1□□□□□ -1.59
VPS13D-207ENST00000476169 PRPF6O94906 941 aaKnown RBP5.1□□□□□ -1.59
VPS13D-207ENST00000476169 ZRANB2O95218 330 aaKnown RBP eCLIP5.1□□□□□ -1.59
VPS13D-207ENST00000476169 MPOP05164 745 aa5.1□□□□□ -1.59
VPS13D-207ENST00000476169 RNASE1P07998 156 aaKnown RBP5.1□□□□□ -1.59
VPS13D-207ENST00000476169 OSMP13725 252 aa5.1□□□□□ -1.59
VPS13D-207ENST00000476169 MTHFD2P13995 350 aa5.1□□□□□ -1.59
VPS13D-207ENST00000476169 ZKSCAN1P17029 563 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-207ENST00000476169 AGXTP21549 392 aa5.1□□□□□ -1.59
VPS13D-207ENST00000476169 SDHBP21912 280 aa5.1□□□□□ -1.59
VPS13D-207ENST00000476169 AOAHP28039 575 aa5.1□□□□□ -1.59
VPS13D-207ENST00000476169 USP14P54578 494 aa5.1□□□□□ -1.59
VPS13D-207ENST00000476169 ERVFRD-1P60508 538 aa5.1□□□□□ -1.59
VPS13D-207ENST00000476169 DBPQ10586 325 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-207ENST00000476169 RAB3GAP1Q15042 981 aa5.1□□□□□ -1.59
VPS13D-207ENST00000476169 PRAMEF9Q5VWM5 478 aa5.1□□□□□ -1.59
VPS13D-207ENST00000476169 MMS22LQ6ZRQ5 1243 aa5.1□□□□□ -1.59
VPS13D-207ENST00000476169 SRGAP1Q7Z6B7 1085 aa5.1□□□□□ -1.59
VPS13D-207ENST00000476169 RTN4RL1Q86UN2 441 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-207ENST00000476169 ZBTB34Q8NCN2 500 aa5.1□□□□□ -1.59
VPS13D-207ENST00000476169 ABHD4Q8TB40 342 aa5.1□□□□□ -1.59
VPS13D-207ENST00000476169 CCT6BQ92526 530 aa5.1□□□□□ -1.59
VPS13D-207ENST00000476169 FOXRED1Q96CU9 486 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-207ENST00000476169 RAX2Q96IS3 184 aa5.1□□□□□ -1.59
VPS13D-207ENST00000476169 CCDC138Q96M89 665 aa5.1□□□□□ -1.59
VPS13D-207ENST00000476169 MYL10Q9BUA6 226 aa5.1□□□□□ -1.59
VPS13D-207ENST00000476169 NAA15Q9BXJ9 866 aaKnown RBP5.1□□□□□ -1.59
VPS13D-207ENST00000476169 INO80BQ9C086 356 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-207ENST00000476169 RNF32Q9H0A6 362 aa5.1□□□□□ -1.59
VPS13D-207ENST00000476169 C9orf78Q9NZ63 289 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-207ENST00000476169 DTLQ9NZJ0 730 aa5.1□□□□□ -1.59
VPS13D-207ENST00000476169 ARHGAP28Q9P2N2 729 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms