RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-222ENST00000475580 SUCLA2Q9P2R7 463 aaPredicted RBP18.51■□□□□ 0.55
VPS8-222ENST00000475580 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.51■□□□□ 0.55
VPS8-222ENST00000475580 ADGRA3Q8IWK6 1321 aa18.5■□□□□ 0.55
VPS8-222ENST00000475580 TRANK1O15050 2925 aa18.5■□□□□ 0.55
VPS8-222ENST00000475580 RALGAPA2Q2PPJ7 1873 aa18.5■□□□□ 0.55
VPS8-222ENST00000475580 A0A087WZ62 844 aa18.5■□□□□ 0.55
VPS8-222ENST00000475580 C9IYK1 514 aa18.5■□□□□ 0.55
VPS8-222ENST00000475580 CSDE1O75534 798 aaKnown RBP18.5■□□□□ 0.55
VPS8-222ENST00000475580 RFC5P40937 340 aa18.5■□□□□ 0.55
VPS8-222ENST00000475580 TECP42680 631 aa18.5■□□□□ 0.55
VPS8-222ENST00000475580 SARSP49591 514 aaKnown RBP18.5■□□□□ 0.55
VPS8-222ENST00000475580 XKR9Q5GH70 373 aa18.5■□□□□ 0.55
VPS8-222ENST00000475580 OTUD6AQ7L8S5 288 aa18.5■□□□□ 0.55
VPS8-222ENST00000475580 KSR1Q8IVT5 923 aa18.5■□□□□ 0.55
VPS8-222ENST00000475580 GDPD5Q8WTR4 605 aa18.5■□□□□ 0.55
VPS8-222ENST00000475580 NLRP7Q8WX94 980 aa18.5■□□□□ 0.55
VPS8-222ENST00000475580 SLC7A3Q8WY07 619 aa18.5■□□□□ 0.55
VPS8-222ENST00000475580 ADAM2Q99965 735 aa18.5■□□□□ 0.55
VPS8-222ENST00000475580 FDXACB1Q9BRP7 624 aaPredicted RBP18.5■□□□□ 0.55
VPS8-222ENST00000475580 XPNPEP1Q9NQW7 623 aa18.5■□□□□ 0.55
VPS8-222ENST00000475580 BMP2KQ9NSY1 1161 aaPredicted RBP18.5■□□□□ 0.55
VPS8-222ENST00000475580 MTCH2Q9Y6C9 303 aa18.5■□□□□ 0.55
VPS8-222ENST00000475580 PRRC2BQ5JSZ5 2229 aaKnown RBP18.5■□□□□ 0.55
VPS8-222ENST00000475580 EYSQ5T1H1 3165 aa18.49■□□□□ 0.55
VPS8-222ENST00000475580 A0A087WWV3 80 aa18.49■□□□□ 0.55
VPS8-222ENST00000475580 MED24O75448 989 aa18.49■□□□□ 0.55
VPS8-222ENST00000475580 FGFR4P22455 802 aa18.49■□□□□ 0.55
VPS8-222ENST00000475580 DNM2P50570 870 aa18.49■□□□□ 0.55
VPS8-222ENST00000475580 POLGP54098 1239 aaPredicted RBP18.49■□□□□ 0.55
VPS8-222ENST00000475580 EMC2Q15006 297 aa18.49■□□□□ 0.55
VPS8-222ENST00000475580 MCTP1Q6DN14 999 aa18.49■□□□□ 0.55
VPS8-222ENST00000475580 ZNF410Q86VK4 478 aa18.49■□□□□ 0.55
VPS8-222ENST00000475580 CATSPER3Q86XQ3 398 aa18.49■□□□□ 0.55
VPS8-222ENST00000475580 RHPN2Q8IUC4 686 aa18.49■□□□□ 0.55
VPS8-222ENST00000475580 SLC17A8Q8NDX2 589 aa18.49■□□□□ 0.55
VPS8-222ENST00000475580 TMEM143Q96AN5 459 aa18.49■□□□□ 0.55
VPS8-222ENST00000475580 TUFT1Q9NNX1 390 aa18.49■□□□□ 0.55
VPS8-222ENST00000475580 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.49■□□□□ 0.55
VPS8-222ENST00000475580 C1orf112Q9NSG2 853 aa18.49■□□□□ 0.55
VPS8-222ENST00000475580 ANKEF1Q9NU02 776 aa18.49■□□□□ 0.55
VPS8-222ENST00000475580 KIAA1671Q9BY89 1806 aa18.49■□□□□ 0.55
VPS8-222ENST00000475580 DENND3A2RUS2 1198 aa18.48■□□□□ 0.55
VPS8-222ENST00000475580 GATMP50440 423 aa18.48■□□□□ 0.55
VPS8-222ENST00000475580 FXR2P51116 673 aaKnown RBP eCLIP18.48■□□□□ 0.55
VPS8-222ENST00000475580 FAM189BP81408 668 aa18.48■□□□□ 0.55
VPS8-222ENST00000475580 CDC42EP1Q00587 391 aa18.48■□□□□ 0.55
VPS8-222ENST00000475580 PTGDRQ13258 359 aa18.48■□□□□ 0.55
VPS8-222ENST00000475580 EPC2Q52LR7 807 aa18.48■□□□□ 0.55
VPS8-222ENST00000475580 SLC24A5Q71RS6 500 aa18.48■□□□□ 0.55
VPS8-222ENST00000475580 EXOC8Q8IYI6 725 aa18.48■□□□□ 0.55
VPS8-222ENST00000475580 PIGOQ8TEQ8 1089 aa18.48■□□□□ 0.55
VPS8-222ENST00000475580 SCLT1Q96NL6 688 aa18.48■□□□□ 0.55
VPS8-222ENST00000475580 POLR3CQ9BUI4 534 aaPredicted RBP18.48■□□□□ 0.55
VPS8-222ENST00000475580 GCOM2Q9BZD3 368 aaPredicted RBP18.48■□□□□ 0.55
VPS8-222ENST00000475580 IFT122Q9HBG6 1241 aa18.48■□□□□ 0.55
VPS8-222ENST00000475580 COL4A3BPQ9Y5P4 624 aa18.48■□□□□ 0.55
VPS8-222ENST00000475580 FNDC1Q4ZHG4 1894 aaPredicted RBP18.48■□□□□ 0.55
VPS8-222ENST00000475580 H3BQV1 296 aa18.47■□□□□ 0.55
VPS8-222ENST00000475580 STAG3L1P0CL83 205 aa18.47■□□□□ 0.55
VPS8-222ENST00000475580 RARRES1P49788 294 aa18.47■□□□□ 0.55
VPS8-222ENST00000475580 IL17AQ16552 155 aa18.47■□□□□ 0.55
VPS8-222ENST00000475580 LARP1BQ659C4 914 aaKnown RBP18.47■□□□□ 0.55
VPS8-222ENST00000475580 TMEM192Q8IY95 271 aa18.47■□□□□ 0.55
VPS8-222ENST00000475580 FIBCD1Q8N539 461 aa18.47■□□□□ 0.55
VPS8-222ENST00000475580 FBXO22Q8NEZ5 403 aa18.47■□□□□ 0.55
VPS8-222ENST00000475580 PRPF31Q8WWY3 499 aaKnown RBP18.47■□□□□ 0.55
VPS8-222ENST00000475580 PPM1EQ8WY54 764 aa18.47■□□□□ 0.55
VPS8-222ENST00000475580 NLRP4Q96MN2 994 aa18.47■□□□□ 0.55
VPS8-222ENST00000475580 SAMD11Q96NU1 681 aa18.47■□□□□ 0.55
VPS8-222ENST00000475580 PRDM6Q9NQX0 595 aa18.47■□□□□ 0.55
VPS8-222ENST00000475580 GAS2O43903 313 aaKnown RBP18.46■□□□□ 0.55
VPS8-222ENST00000475580 XRCC6P12956 609 aaKnown RBP eCLIP18.46■□□□□ 0.55
VPS8-222ENST00000475580 RPA1P27694 616 aa18.46■□□□□ 0.55
VPS8-222ENST00000475580 LAMTOR4Q0VGL1 99 aa18.46■□□□□ 0.55
VPS8-222ENST00000475580 BTG3Q14201 252 aaPredicted RBP18.46■□□□□ 0.55
VPS8-222ENST00000475580 CCDC85BQ15834 202 aaPredicted RBP18.46■□□□□ 0.55
VPS8-222ENST00000475580 ECM1Q16610 540 aa18.46■□□□□ 0.55
VPS8-222ENST00000475580 RILPL1Q5EBL4 403 aa18.46■□□□□ 0.55
VPS8-222ENST00000475580 POTEGQ6S5H5 508 aa18.46■□□□□ 0.55
VPS8-222ENST00000475580 FERMT3Q86UX7 667 aa18.46■□□□□ 0.55
VPS8-222ENST00000475580 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.46■□□□□ 0.55
VPS8-222ENST00000475580 CMTR2Q8IYT2 770 aaKnown RBP18.46■□□□□ 0.55
VPS8-222ENST00000475580 IGSF22Q8N9C0 903 aa18.46■□□□□ 0.55
VPS8-222ENST00000475580 PSPC1Q8WXF1 523 aaKnown RBP18.46■□□□□ 0.55
VPS8-222ENST00000475580 CLP1Q92989 425 aaKnown RBP18.46■□□□□ 0.55
VPS8-222ENST00000475580 MTRQ99707 1265 aa18.46■□□□□ 0.55
VPS8-222ENST00000475580 MRPL42Q9Y6G3 142 aaKnown RBP18.46■□□□□ 0.55
VPS8-222ENST00000475580 GTPBP6O43824 516 aaPredicted RBP18.45■□□□□ 0.54
VPS8-222ENST00000475580 DGAT1O75907 488 aa18.45■□□□□ 0.54
VPS8-222ENST00000475580 IBSPP21815 317 aaPredicted RBP18.45■□□□□ 0.54
VPS8-222ENST00000475580 ERMNQ8TAM6 284 aa18.45■□□□□ 0.54
VPS8-222ENST00000475580 TCP11Q8WWU5 503 aa18.45■□□□□ 0.54
VPS8-222ENST00000475580 ELAC1Q9H777 363 aaKnown RBP18.45■□□□□ 0.54
VPS8-222ENST00000475580 MINDY3Q9H8M7 445 aa18.45■□□□□ 0.54
VPS8-222ENST00000475580 ATP6V0A4Q9HBG4 840 aa18.45■□□□□ 0.54
VPS8-222ENST00000475580 RNF19AQ9NV58 838 aa18.45■□□□□ 0.54
VPS8-222ENST00000475580 TMEM161AQ9NX61 479 aa18.45■□□□□ 0.54
VPS8-222ENST00000475580 LRFN2Q9ULH4 789 aa18.45■□□□□ 0.54
VPS8-222ENST00000475580 PCDHB7Q9Y5E2 793 aa18.45■□□□□ 0.54
VPS8-222ENST00000475580 C5orf67F2Z3F1 127 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms