RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 BICC1Q9H694 974 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 VCX3AQ9NNX9 186 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 DDX21Q9NR30 783 aaKnown RBP eCLIP6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 KRT82Q9NSB4 513 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 HESX1Q9UBX0 185 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 KLF15Q9UIH9 416 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 PRR12Q9ULL5 1215 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 NOSIPQ9Y314 301 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 ANKRD30BQ9BXX2 1392 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 CDC42BPAQ5VT25 1732 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 SIGLEC1Q9BZZ2 1709 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 PRDM15P57071 1507 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 FAM135AQ9P2D6 1515 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 MYPNQ86TC9 1320 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 ADGBQ8N7X0 1667 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 A2ML1A8K2U0 1454 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 MEIS3P2A8K0S8 358 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 NEURL1BA8MQ27 555 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 KIF11P52732 1056 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 GUCY1B3Q02153 619 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 SULT2A1Q06520 285 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 SNW1Q13573 536 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 LONRF2Q1L5Z9 754 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 TRIM71Q2Q1W2 868 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 TM4SF20Q53R12 229 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 MAP1SQ66K74 1059 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 CCBE1Q6UXH8 406 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 ZNF804AQ7Z570 1209 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 DAAM2Q86T65 1068 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 PDZD3Q86UT5 571 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 THNSL2Q86YJ6 484 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 RAB11FIP4Q86YS3 637 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 ARL6IP6Q8N6S5 226 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 GDAP1Q8TB36 358 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 MAML1Q92585 1016 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 HPS3Q969F9 1004 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 MFSD3Q96ES6 412 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 NEK1Q96PY6 1258 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 TRAPPC9Q96Q05 1148 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 SPATA9Q9BWV2 254 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 VIPAS39Q9H9C1 493 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 DMAP1Q9NPF5 467 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 TCF7L2Q9NQB0 619 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 XPO7Q9UIA9 1087 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 GTF3C4Q9UKN8 822 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 SOX13Q9UN79 622 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 SATB2Q9UPW6 733 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 LZTS1Q9Y250 596 aa6.55□□□□□ -1.36
ECHDC1-215ENST00000475319 TNRQ92752 1358 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 SH3TC1Q8TE82 1336 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 LINC00854A0A1B0GVQ3 168 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 MYO1FO00160 1098 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 STXBP3O00186 592 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 IRS4O14654 1257 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 KCNQ2O43526 872 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 PRC1O43663 620 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 AKR1B10O60218 316 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 SEC31AO94979 1220 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 HTR3BO95264 441 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 LINGO3P0C6S8 592 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 POLR2EP19388 210 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 MX1P20591 662 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 CCT5P48643 541 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 PIP4K2BP78356 416 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 CDK17Q00537 523 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 BYSLQ13895 437 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 KCTD2Q14681 263 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 PTPRKQ15262 1439 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 SAFBQ15424 915 aaKnown RBP eCLIP6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 ZYXQ15942 572 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 SGSM1Q2NKQ1 1148 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 RABL6Q3YEC7 729 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 BRDTQ58F21 947 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 HGSNATQ68CP4 663 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 VHLLQ6RSH7 139 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 NLRP9Q7RTR0 991 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 PPFIBP1Q86W92 1011 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 LURAP1LQ8IV03 231 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 NIM1KQ8IY84 436 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 CCAR2Q8N163 923 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 DEPTORQ8TB45 409 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 CHAC2Q8WUX2 184 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 TMEM40Q8WWA1 233 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 NINJ1Q92982 152 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 ABHD8Q96I13 439 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 C8orf76Q96K31 380 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 RPGRIP1Q96KN7 1286 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 CCT7Q99832 543 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 KRTAP9-8Q9BYQ0 159 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 NAT10Q9H0A0 1025 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 ALDH8A1Q9H2A2 487 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 GOLPH3LQ9H4A5 285 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 CLK4Q9HAZ1 481 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 PARVGQ9HBI0 331 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 DISC1Q9NRI5 854 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 DNAJB12Q9NXW2 375 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 R3HDM2Q9Y2K5 976 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 C15orf41Q9Y2V0 281 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 CLTCQ00610 1675 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 CPS1P31327 1500 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms