RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 SNX24Q9Y343 169 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 ROBO2Q9HCK4 1378 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 CCDC195A0A1B0GUA6 201 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 GPC3P51654 580 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 AP1B1Q10567 949 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 CUL4AQ13619 759 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 SAAL1Q96ER3 474 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 RRP15Q9Y3B9 282 aaKnown RBP11.73□□□□□ -0.53
VAPB-204ENST00000475243 ZNF335Q9H4Z2 1342 aaPredicted RBP11.73□□□□□ -0.53
VAPB-204ENST00000475243 LUC7L3O95232 432 aaKnown RBP11.73□□□□□ -0.53
VAPB-204ENST00000475243 ESRRBO95718 433 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 CASP8Q14790 479 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 EPHA10Q5JZY3 1008 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 KRT80Q6KB66 452 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 PADI6Q6TGC4 694 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 PPP4R3CPQ6ZMV5 832 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 RNF25Q96BH1 459 aaPredicted RBP11.73□□□□□ -0.53
VAPB-204ENST00000475243 KLC2Q9H0B6 622 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 HOXC10Q9NYD6 342 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 ZRANB2O95218 330 aaKnown RBP eCLIP11.73□□□□□ -0.53
VAPB-204ENST00000475243 TMPRSS15P98073 1019 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 SPP2Q13103 211 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 ZNF211Q13398 564 aaPredicted RBP11.73□□□□□ -0.53
VAPB-204ENST00000475243 C6orf118Q5T5N4 469 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 BZW1Q7L1Q6 419 aaKnown RBP11.73□□□□□ -0.53
VAPB-204ENST00000475243 GSPT2Q8IYD1 628 aaKnown RBP11.73□□□□□ -0.53
VAPB-204ENST00000475243 DCAF4Q8WV16 495 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 PLAAQ9Y263 795 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 HUS1O60921 280 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 NR3C1P04150 777 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 ESRRGP62508 458 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 POU5F1BQ06416 359 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 KCNH2Q12809 1159 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 PDCD2Q16342 344 aaPredicted RBP11.72□□□□□ -0.53
VAPB-204ENST00000475243 ARL6IP4Q66PJ3 421 aaKnown RBP11.72□□□□□ -0.53
VAPB-204ENST00000475243 PPP1R2P3Q6NXS1 205 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 GNAT1P11488 350 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 JAK3P52333 1124 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 ARHGDIAP52565 204 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 FBXW4P57775 412 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 GLE1Q53GS7 698 aaKnown RBP11.72□□□□□ -0.53
VAPB-204ENST00000475243 UNC13DQ70J99 1090 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 GABBR1Q9UBS5 961 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 CACNB2Q08289 660 aaPredicted RBP11.72□□□□□ -0.53
VAPB-204ENST00000475243 FBXO41Q8TF61 875 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 GTSE1Q9NYZ3 720 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 CEP170Q5SW79 1584 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 UBE4BO95155 1302 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 RECQLP46063 649 aaPredicted RBP11.72□□□□□ -0.53
VAPB-204ENST00000475243 TAF1BQ53T94 588 aaPredicted RBP11.72□□□□□ -0.53
VAPB-204ENST00000475243 ADGRF4Q8IZF3 695 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 NCLNQ969V3 563 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 MAPK13O15264 365 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 SNX2O60749 519 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 PRR29P0C7W0 189 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 CLCN6P51797 869 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 ALCAMQ13740 583 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 SLC13A1Q9BZW2 595 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 NPHP4O75161 1426 aaPredicted RBP11.72□□□□□ -0.53
VAPB-204ENST00000475243 GRAMD1BQ3KR37 738 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 DCAF4L1Q3SXM0 396 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 DHX38Q92620 1227 aaKnown RBP11.72□□□□□ -0.53
VAPB-204ENST00000475243 ZNF302Q9NR11 478 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 TXLNGQ9NUQ3 528 aa11.72□□□□□ -0.53
VAPB-204ENST00000475243 MAP3K7O43318 606 aa11.71□□□□□ -0.53
VAPB-204ENST00000475243 HSPA6P17066 643 aa11.71□□□□□ -0.53
VAPB-204ENST00000475243 HADHAP40939 763 aa11.71□□□□□ -0.53
VAPB-204ENST00000475243 TOB2Q14106 344 aaPredicted RBP11.71□□□□□ -0.53
VAPB-204ENST00000475243 MXD4Q14582 209 aaPredicted RBP11.71□□□□□ -0.53
VAPB-204ENST00000475243 ENAHQ8N8S7 591 aaPredicted RBP11.71□□□□□ -0.53
VAPB-204ENST00000475243 OTUD5Q96G74 571 aa11.71□□□□□ -0.53
VAPB-204ENST00000475243 VPS11Q9H270 941 aa11.71□□□□□ -0.53
VAPB-204ENST00000475243 FEM1BQ9UK73 627 aa11.71□□□□□ -0.53
VAPB-204ENST00000475243 PACSIN2Q9UNF0 486 aaPredicted RBP11.71□□□□□ -0.53
VAPB-204ENST00000475243 SCINQ9Y6U3 715 aa11.71□□□□□ -0.53
VAPB-204ENST00000475243 AATKQ6ZMQ8 1374 aa11.71□□□□□ -0.53
VAPB-204ENST00000475243 ATP7BP35670 1465 aa11.71□□□□□ -0.53
VAPB-204ENST00000475243 MFAP3LO75121 409 aa11.71□□□□□ -0.53
VAPB-204ENST00000475243 PPARGP37231 505 aaPredicted RBP11.71□□□□□ -0.53
VAPB-204ENST00000475243 IMPG1Q17R60 797 aa11.71□□□□□ -0.53
VAPB-204ENST00000475243 CCDC124Q96CT7 223 aaKnown RBP11.71□□□□□ -0.53
VAPB-204ENST00000475243 PITPNM3Q9BZ71 974 aa11.71□□□□□ -0.53
VAPB-204ENST00000475243 CD209Q9NNX6 404 aa11.71□□□□□ -0.53
VAPB-204ENST00000475243 ABHD10Q9NUJ1 306 aa11.71□□□□□ -0.53
VAPB-204ENST00000475243 ANKRD65E5RJM6 399 aa11.71□□□□□ -0.53
VAPB-204ENST00000475243 COPEO14579 308 aa11.71□□□□□ -0.53
VAPB-204ENST00000475243 PFKFB3Q16875 520 aaPredicted RBP11.71□□□□□ -0.53
VAPB-204ENST00000475243 DRC3Q9H069 523 aa11.71□□□□□ -0.53
VAPB-204ENST00000475243 SIK2Q9H0K1 926 aa11.71□□□□□ -0.53
VAPB-204ENST00000475243 SH3GLB2Q9NR46 395 aa11.71□□□□□ -0.53
VAPB-204ENST00000475243 PPARGC1AQ9UBK2 798 aaKnown RBP11.71□□□□□ -0.53
VAPB-204ENST00000475243 AFF4Q9UHB7 1163 aaKnown RBP11.71□□□□□ -0.53
VAPB-204ENST00000475243 KDM5CP41229 1560 aa11.71□□□□□ -0.53
VAPB-204ENST00000475243 RASA4BC9J798 803 aa11.71□□□□□ -0.54
VAPB-204ENST00000475243 RASA4O43374 803 aa11.71□□□□□ -0.54
VAPB-204ENST00000475243 VAMP7P51809 220 aa11.71□□□□□ -0.54
VAPB-204ENST00000475243 GPSM2P81274 684 aa11.71□□□□□ -0.54
VAPB-204ENST00000475243 ELMOD1Q8N336 334 aa11.71□□□□□ -0.54
VAPB-204ENST00000475243 XXYLT1Q8NBI6 393 aa11.71□□□□□ -0.54
VAPB-204ENST00000475243 CELF1Q92879 486 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms