RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 TRIM67Q6ZTA4 783 aa28.14■■■□□ 2.1
TMEM54-205ENST00000475208 ABI1Q8IZP0 508 aa28.14■■■□□ 2.1
TMEM54-205ENST00000475208 LRRC43Q8N309 656 aa28.14■■■□□ 2.1
TMEM54-205ENST00000475208 SUSD6Q92537 303 aa28.14■■■□□ 2.1
TMEM54-205ENST00000475208 ZNF668Q96K58 619 aaPredicted RBP28.14■■■□□ 2.1
TMEM54-205ENST00000475208 ENTPD7Q9NQZ7 604 aa28.14■■■□□ 2.1
TMEM54-205ENST00000475208 VPS54Q9P1Q0 977 aa28.14■■■□□ 2.1
TMEM54-205ENST00000475208 PUF60Q9UHX1 559 aaKnown RBP28.14■■■□□ 2.1
TMEM54-205ENST00000475208 SNX14Q9Y5W7 946 aa28.14■■■□□ 2.1
TMEM54-205ENST00000475208 MSH4O15457 936 aa28.13■■■□□ 2.09
TMEM54-205ENST00000475208 SRGAP2BP0DMP2 458 aa28.13■■■□□ 2.09
TMEM54-205ENST00000475208 ATF7P17544 494 aaPredicted RBP28.13■■■□□ 2.09
TMEM54-205ENST00000475208 HSPA4P34932 840 aa28.13■■■□□ 2.09
TMEM54-205ENST00000475208 UGCGQ16739 394 aa28.13■■■□□ 2.09
TMEM54-205ENST00000475208 KCNT2Q6UVM3 1135 aa28.13■■■□□ 2.09
TMEM54-205ENST00000475208 BMP8AQ7Z5Y6 402 aa28.13■■■□□ 2.09
TMEM54-205ENST00000475208 ECHDC2Q86YB7 292 aa28.13■■■□□ 2.09
TMEM54-205ENST00000475208 ZNF558Q96NG5 402 aa28.13■■■□□ 2.09
TMEM54-205ENST00000475208 TCF25Q9BQ70 676 aa28.13■■■□□ 2.09
TMEM54-205ENST00000475208 SLC26A6Q9BXS9 759 aa28.13■■■□□ 2.09
TMEM54-205ENST00000475208 RNF26Q9BY78 433 aaPredicted RBP28.13■■■□□ 2.09
TMEM54-205ENST00000475208 NRBP2Q9NSY0 501 aa28.13■■■□□ 2.09
TMEM54-205ENST00000475208 WDR81Q562E7 1941 aa28.13■■■□□ 2.09
TMEM54-205ENST00000475208 CHMP2AO43633 222 aa28.12■■■□□ 2.09
TMEM54-205ENST00000475208 EDIL3O43854 480 aa28.12■■■□□ 2.09
TMEM54-205ENST00000475208 GAS7O60861 476 aa28.12■■■□□ 2.09
TMEM54-205ENST00000475208 RPS6KB1P23443 525 aa28.12■■■□□ 2.09
TMEM54-205ENST00000475208 PPM1AP35813 382 aa28.12■■■□□ 2.09
TMEM54-205ENST00000475208 PBX3P40426 434 aa28.12■■■□□ 2.09
TMEM54-205ENST00000475208 GPC3P51654 580 aa28.12■■■□□ 2.09
TMEM54-205ENST00000475208 ZXDAP98168 799 aa28.12■■■□□ 2.09
TMEM54-205ENST00000475208 NTRK3Q16288 839 aa28.12■■■□□ 2.09
TMEM54-205ENST00000475208 ZNF710Q8N1W2 664 aa28.12■■■□□ 2.09
TMEM54-205ENST00000475208 RNF169Q8NCN4 708 aa28.12■■■□□ 2.09
TMEM54-205ENST00000475208 CCDC136Q96JN2 1154 aa28.12■■■□□ 2.09
TMEM54-205ENST00000475208 SCLT1Q96NL6 688 aa28.12■■■□□ 2.09
TMEM54-205ENST00000475208 TECP42680 631 aa28.11■■■□□ 2.09
TMEM54-205ENST00000475208 KCNC3Q14003 757 aa28.11■■■□□ 2.09
TMEM54-205ENST00000475208 ANKRD54Q6NXT1 300 aa28.11■■■□□ 2.09
TMEM54-205ENST00000475208 TMEM184AQ6ZMB5 413 aa28.11■■■□□ 2.09
TMEM54-205ENST00000475208 FBXL16Q8N461 479 aa28.11■■■□□ 2.09
TMEM54-205ENST00000475208 PBXIP1Q96AQ6 731 aa28.11■■■□□ 2.09
TMEM54-205ENST00000475208 RIT2Q99578 217 aa28.11■■■□□ 2.09
TMEM54-205ENST00000475208 AGXT2Q9BYV1 514 aa28.11■■■□□ 2.09
TMEM54-205ENST00000475208 NGRNQ9NPE2 291 aaKnown RBP28.11■■■□□ 2.09
TMEM54-205ENST00000475208 HIDE1A8MVS5 230 aa28.1■■■□□ 2.09
TMEM54-205ENST00000475208 DARSP14868 501 aaKnown RBP28.1■■■□□ 2.09
TMEM54-205ENST00000475208 IFNAR1P17181 557 aa28.1■■■□□ 2.09
TMEM54-205ENST00000475208 SFNP31947 248 aa28.1■■■□□ 2.09
TMEM54-205ENST00000475208 JAK3P52333 1124 aa28.1■■■□□ 2.09
TMEM54-205ENST00000475208 CLLU1OSQ5K130 101 aa28.1■■■□□ 2.09
TMEM54-205ENST00000475208 LRCH2Q5VUJ6 765 aa28.1■■■□□ 2.09
TMEM54-205ENST00000475208 LLGL2Q6P1M3 1020 aa28.1■■■□□ 2.09
TMEM54-205ENST00000475208 SLC5A5Q92911 643 aa28.1■■■□□ 2.09
TMEM54-205ENST00000475208 TEKT3Q9BXF9 490 aa28.1■■■□□ 2.09
TMEM54-205ENST00000475208 UNC45AQ9H3U1 944 aa28.1■■■□□ 2.09
TMEM54-205ENST00000475208 FGFR4P22455 802 aa28.09■■■□□ 2.09
TMEM54-205ENST00000475208 USP11P51784 963 aa28.09■■■□□ 2.09
TMEM54-205ENST00000475208 KRT17Q04695 432 aa28.09■■■□□ 2.09
TMEM54-205ENST00000475208 TBC1D8BQ0IIM8 1120 aa28.09■■■□□ 2.09
TMEM54-205ENST00000475208 NLRP7Q8WX94 980 aa28.09■■■□□ 2.09
TMEM54-205ENST00000475208 GJA10Q969M2 543 aa28.09■■■□□ 2.09
TMEM54-205ENST00000475208 APOL5Q9BWW9 433 aa28.09■■■□□ 2.09
TMEM54-205ENST00000475208 S1PR5Q9H228 398 aa28.09■■■□□ 2.09
TMEM54-205ENST00000475208 SPG21Q9NZD8 308 aa28.09■■■□□ 2.09
TMEM54-205ENST00000475208 CCT2P78371 535 aaKnown RBP28.08■■■□□ 2.09
TMEM54-205ENST00000475208 SYCE2Q6PIF2 218 aa28.08■■■□□ 2.09
TMEM54-205ENST00000475208 TMC7Q7Z402 723 aa28.08■■■□□ 2.09
TMEM54-205ENST00000475208 NCOA5Q9HCD5 579 aaKnown RBP28.08■■■□□ 2.09
TMEM54-205ENST00000475208 A0A0U1RQF3 1178 aa28.07■■■□□ 2.08
TMEM54-205ENST00000475208 NLRP5P59047 1200 aa28.07■■■□□ 2.08
TMEM54-205ENST00000475208 ZNF598Q86UK7 904 aaKnown RBP28.07■■■□□ 2.08
TMEM54-205ENST00000475208 SUGP1Q8IWZ8 645 aaKnown RBP28.07■■■□□ 2.08
TMEM54-205ENST00000475208 HELQQ8TDG4 1101 aa28.07■■■□□ 2.08
TMEM54-205ENST00000475208 SEPT9Q9UHD8 586 aaPredicted RBP28.07■■■□□ 2.08
TMEM54-205ENST00000475208 PDIA3P30101 505 aaKnown RBP28.06■■■□□ 2.08
TMEM54-205ENST00000475208 SIGLEC14Q08ET2 396 aa28.06■■■□□ 2.08
TMEM54-205ENST00000475208 DRP2Q13474 957 aa28.06■■■□□ 2.08
TMEM54-205ENST00000475208 TARBP2Q15633 366 aaKnown RBP28.06■■■□□ 2.08
TMEM54-205ENST00000475208 SLC39A11Q8N1S5 342 aa28.06■■■□□ 2.08
TMEM54-205ENST00000475208 PRSS33Q8NF86 280 aa28.06■■■□□ 2.08
TMEM54-205ENST00000475208 TBCKQ8TEA7 893 aa28.06■■■□□ 2.08
TMEM54-205ENST00000475208 SH3GLB2Q9NR46 395 aa28.06■■■□□ 2.08
TMEM54-205ENST00000475208 DACT1Q9NYF0 836 aa28.06■■■□□ 2.08
TMEM54-205ENST00000475208 CSDE1O75534 798 aaKnown RBP28.05■■■□□ 2.08
TMEM54-205ENST00000475208 EOMESO95936 686 aa28.05■■■□□ 2.08
TMEM54-205ENST00000475208 PSMA5P28066 241 aa28.05■■■□□ 2.08
TMEM54-205ENST00000475208 MTERF2Q49AM1 385 aa28.05■■■□□ 2.08
TMEM54-205ENST00000475208 MIER3Q7Z3K6 550 aa28.05■■■□□ 2.08
TMEM54-205ENST00000475208 RDM1Q8NG50 284 aa28.05■■■□□ 2.08
TMEM54-205ENST00000475208 PSMD10O75832 226 aa28.04■■■□□ 2.08
TMEM54-205ENST00000475208 HOXB8P17481 243 aaPredicted RBP28.04■■■□□ 2.08
TMEM54-205ENST00000475208 EVCP57679 992 aa28.04■■■□□ 2.08
TMEM54-205ENST00000475208 SMC1AQ14683 1233 aaKnown RBP28.04■■■□□ 2.08
TMEM54-205ENST00000475208 IER5LQ5T953 404 aa28.04■■■□□ 2.08
TMEM54-205ENST00000475208 CASP10Q92851 521 aa28.04■■■□□ 2.08
TMEM54-205ENST00000475208 MRPL9Q9BYD2 267 aaKnown RBP28.04■■■□□ 2.08
TMEM54-205ENST00000475208 GCOM2Q9BZD3 368 aaPredicted RBP28.04■■■□□ 2.08
TMEM54-205ENST00000475208 TMEM150BA6NC51 233 aa28.03■■■□□ 2.08
TMEM54-205ENST00000475208 TDP2O95551 362 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms