RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 PCDHB7Q9Y5E2 793 aa13.31□□□□□ -0.28
CLIP2-204ENST00000474962 LOXHD1Q8IVV2 1947 aa13.31□□□□□ -0.28
CLIP2-204ENST00000474962 DENND3A2RUS2 1198 aa13.3□□□□□ -0.28
CLIP2-204ENST00000474962 GPR182O15218 404 aa13.3□□□□□ -0.28
CLIP2-204ENST00000474962 MAGEB2O15479 319 aa13.3□□□□□ -0.28
CLIP2-204ENST00000474962 CCNT1O60563 726 aaKnown RBP13.3□□□□□ -0.28
CLIP2-204ENST00000474962 PSMD10O75832 226 aa13.3□□□□□ -0.28
CLIP2-204ENST00000474962 STAG3L1P0CL83 205 aa13.3□□□□□ -0.28
CLIP2-204ENST00000474962 DNAJB1P25685 340 aa13.3□□□□□ -0.28
CLIP2-204ENST00000474962 SARSP49591 514 aaKnown RBP13.3□□□□□ -0.28
CLIP2-204ENST00000474962 NLRP11P59045 1033 aaKnown RBP13.3□□□□□ -0.28
CLIP2-204ENST00000474962 FAM228AQ86W67 206 aa13.3□□□□□ -0.28
CLIP2-204ENST00000474962 CMTR2Q8IYT2 770 aaKnown RBP13.3□□□□□ -0.28
CLIP2-204ENST00000474962 KHSRPQ92945 711 aaKnown RBP eCLIP13.3□□□□□ -0.28
CLIP2-204ENST00000474962 SH2D3AQ9BRG2 576 aa13.3□□□□□ -0.28
CLIP2-204ENST00000474962 C11orf84Q9BUA3 381 aaPredicted RBP13.3□□□□□ -0.28
CLIP2-204ENST00000474962 ADAMTS10Q9H324 1103 aa13.3□□□□□ -0.28
CLIP2-204ENST00000474962 NSUN3Q9H649 340 aaKnown RBP13.3□□□□□ -0.28
CLIP2-204ENST00000474962 EPHX3Q9H6B9 360 aa13.3□□□□□ -0.28
CLIP2-204ENST00000474962 RWDD3Q9Y3V2 267 aa13.3□□□□□ -0.28
CLIP2-204ENST00000474962 TMEM150BA6NC51 233 aa13.29□□□□□ -0.28
CLIP2-204ENST00000474962 C9IYK1 514 aa13.29□□□□□ -0.28
CLIP2-204ENST00000474962 STBD1O95210 358 aa13.29□□□□□ -0.28
CLIP2-204ENST00000474962 OATP04181 439 aa13.29□□□□□ -0.28
CLIP2-204ENST00000474962 ITGB1P05556 798 aa13.29□□□□□ -0.28
CLIP2-204ENST00000474962 GCFC2P16383 781 aaKnown RBP13.29□□□□□ -0.28
CLIP2-204ENST00000474962 U2AF2P26368 475 aaKnown RBP eCLIP13.29□□□□□ -0.28
CLIP2-204ENST00000474962 GTF2F1P35269 517 aaKnown RBP eCLIP13.29□□□□□ -0.28
CLIP2-204ENST00000474962 LTBRP36941 435 aa13.29□□□□□ -0.28
CLIP2-204ENST00000474962 FAM189BP81408 668 aa13.29□□□□□ -0.28
CLIP2-204ENST00000474962 PRKCEQ02156 737 aa13.29□□□□□ -0.28
CLIP2-204ENST00000474962 HYAL1Q12794 435 aa13.29□□□□□ -0.28
CLIP2-204ENST00000474962 TIGD5Q53EQ6 642 aa13.29□□□□□ -0.28
CLIP2-204ENST00000474962 PTCRAQ6ISU1 281 aaPredicted RBP13.29□□□□□ -0.28
CLIP2-204ENST00000474962 MOXD1Q6UVY6 613 aa13.29□□□□□ -0.28
CLIP2-204ENST00000474962 SLC24A5Q71RS6 500 aa13.29□□□□□ -0.28
CLIP2-204ENST00000474962 BRAPQ7Z569 592 aa13.29□□□□□ -0.28
CLIP2-204ENST00000474962 LINC01465Q8N7H1 131 aa13.29□□□□□ -0.28
CLIP2-204ENST00000474962 KLHL23Q8NBE8 558 aa13.29□□□□□ -0.28
CLIP2-204ENST00000474962 SPPL3Q8TCT6 385 aa13.29□□□□□ -0.28
CLIP2-204ENST00000474962 NEK9Q8TD19 979 aa13.29□□□□□ -0.28
CLIP2-204ENST00000474962 MBOAT7Q96N66 472 aa13.29□□□□□ -0.28
CLIP2-204ENST00000474962 PLVAPQ9BX97 442 aa13.29□□□□□ -0.28
CLIP2-204ENST00000474962 TEKT3Q9BXF9 490 aa13.29□□□□□ -0.28
CLIP2-204ENST00000474962 IGFLR1Q9H665 355 aa13.29□□□□□ -0.28
CLIP2-204ENST00000474962 RAPGEFL1Q9UHV5 662 aa13.29□□□□□ -0.28
CLIP2-204ENST00000474962 CEP131Q9UPN4 1083 aa13.29□□□□□ -0.28
CLIP2-204ENST00000474962 AKT3Q9Y243 479 aa13.29□□□□□ -0.28
CLIP2-204ENST00000474962 RBM19Q9Y4C8 960 aaKnown RBP13.29□□□□□ -0.28
CLIP2-204ENST00000474962 MYH9P35579 1960 aaKnown RBP13.29□□□□□ -0.28
CLIP2-204ENST00000474962 GRXCR2A6NFK2 248 aa13.28□□□□□ -0.28
CLIP2-204ENST00000474962 TBKBP1A7MCY6 615 aa13.28□□□□□ -0.28
CLIP2-204ENST00000474962 CSDE1O75534 798 aaKnown RBP13.28□□□□□ -0.28
CLIP2-204ENST00000474962 BAG4O95429 457 aaKnown RBP13.28□□□□□ -0.28
CLIP2-204ENST00000474962 IL9P15248 144 aa13.28□□□□□ -0.28
CLIP2-204ENST00000474962 TMOD1P28289 359 aa13.28□□□□□ -0.28
CLIP2-204ENST00000474962 SFNP31947 248 aa13.28□□□□□ -0.28
CLIP2-204ENST00000474962 JAK3P52333 1124 aa13.28□□□□□ -0.28
CLIP2-204ENST00000474962 DLX2Q07687 328 aaPredicted RBP13.28□□□□□ -0.28
CLIP2-204ENST00000474962 DRP2Q13474 957 aa13.28□□□□□ -0.28
CLIP2-204ENST00000474962 DSC3Q14574 896 aa13.28□□□□□ -0.28
CLIP2-204ENST00000474962 COL19A1Q14993 1142 aa13.28□□□□□ -0.28
CLIP2-204ENST00000474962 TARBP2Q15633 366 aaKnown RBP13.28□□□□□ -0.28
CLIP2-204ENST00000474962 B3GNT9Q6UX72 402 aa13.28□□□□□ -0.28
CLIP2-204ENST00000474962 MIER3Q7Z3K6 550 aa13.28□□□□□ -0.28
CLIP2-204ENST00000474962 FERMT3Q86UX7 667 aa13.28□□□□□ -0.28
CLIP2-204ENST00000474962 ETNPPLQ8TBG4 499 aa13.28□□□□□ -0.28
CLIP2-204ENST00000474962 TNFRSF25Q93038 417 aa13.28□□□□□ -0.28
CLIP2-204ENST00000474962 PABPC5Q96DU9 382 aaKnown RBP13.28□□□□□ -0.28
CLIP2-204ENST00000474962 FAM167AQ96KS9 214 aa13.28□□□□□ -0.28
CLIP2-204ENST00000474962 ZSCAN16Q9H4T2 348 aaPredicted RBP13.28□□□□□ -0.28
CLIP2-204ENST00000474962 TSHZ2Q9NRE2 1034 aa13.28□□□□□ -0.28
CLIP2-204ENST00000474962 CLDND1Q9NY35 253 aa13.28□□□□□ -0.28
CLIP2-204ENST00000474962 DDX25Q9UHL0 483 aaKnown RBP13.28□□□□□ -0.28
CLIP2-204ENST00000474962 COL4A6Q14031 1691 aa13.28□□□□□ -0.28
CLIP2-204ENST00000474962 FAM205CA6NFA0 338 aa13.27□□□□□ -0.29
CLIP2-204ENST00000474962 DDX11L8A8MPP1 907 aa13.27□□□□□ -0.29
CLIP2-204ENST00000474962 EML1O00423 815 aa13.27□□□□□ -0.29
CLIP2-204ENST00000474962 SLC37A4O43826 429 aa13.27□□□□□ -0.29
CLIP2-204ENST00000474962 FGFR1P11362 822 aa13.27□□□□□ -0.29
CLIP2-204ENST00000474962 COL9A1P20849 921 aa13.27□□□□□ -0.29
CLIP2-204ENST00000474962 FGFR4P22455 802 aa13.27□□□□□ -0.29
CLIP2-204ENST00000474962 EIF4BP23588 611 aaKnown RBP13.27□□□□□ -0.29
CLIP2-204ENST00000474962 IRS1P35568 1242 aa13.27□□□□□ -0.29
CLIP2-204ENST00000474962 TRAPPC10P48553 1259 aa13.27□□□□□ -0.29
CLIP2-204ENST00000474962 CTC1Q2NKJ3 1217 aa13.27□□□□□ -0.29
CLIP2-204ENST00000474962 RILPL1Q5EBL4 403 aa13.27□□□□□ -0.29
CLIP2-204ENST00000474962 EARS2Q5JPH6 523 aaKnown RBP13.27□□□□□ -0.29
CLIP2-204ENST00000474962 PPP4R3AQ6IN85 833 aa13.27□□□□□ -0.29
CLIP2-204ENST00000474962 FAM178BQ8IXR5 827 aa13.27□□□□□ -0.29
CLIP2-204ENST00000474962 P2RX5Q93086 422 aa13.27□□□□□ -0.29
CLIP2-204ENST00000474962 CEP89Q96ST8 783 aa13.27□□□□□ -0.29
CLIP2-204ENST00000474962 NIFKQ9BYG3 293 aaKnown RBP13.27□□□□□ -0.29
CLIP2-204ENST00000474962 LMAN2LQ9H0V9 348 aa13.27□□□□□ -0.29
CLIP2-204ENST00000474962 C1orf112Q9NSG2 853 aa13.27□□□□□ -0.29
CLIP2-204ENST00000474962 TYW1Q9NV66 732 aaKnown RBP13.27□□□□□ -0.29
CLIP2-204ENST00000474962 HCSTQ9UBK5 93 aa13.27□□□□□ -0.29
CLIP2-204ENST00000474962 PCDHGC5Q9Y5F6 944 aa13.27□□□□□ -0.29
CLIP2-204ENST00000474962 NLRC5Q86WI3 1866 aa13.27□□□□□ -0.29
CLIP2-204ENST00000474962 LINC01565O15544 149 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms