RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 PPME1Q9Y570 386 aa23.81■■□□□ 1.4
CCM2-206ENST00000474617 GFPT2O94808 682 aa23.8■■□□□ 1.4
CCM2-206ENST00000474617 TGFB3P10600 412 aa23.8■■□□□ 1.4
CCM2-206ENST00000474617 KRT13P13646 458 aa23.8■■□□□ 1.4
CCM2-206ENST00000474617 CETN1Q12798 172 aa23.8■■□□□ 1.4
CCM2-206ENST00000474617 DMP1Q13316 513 aaPredicted RBP23.8■■□□□ 1.4
CCM2-206ENST00000474617 ASIC2Q16515 512 aa23.8■■□□□ 1.4
CCM2-206ENST00000474617 ZC2HC1CQ53FD0 456 aaPredicted RBP23.8■■□□□ 1.4
CCM2-206ENST00000474617 DCAF17Q5H9S7 520 aaPredicted RBP23.8■■□□□ 1.4
CCM2-206ENST00000474617 KLHDC7AQ5VTJ3 777 aa23.8■■□□□ 1.4
CCM2-206ENST00000474617 ARGLU1Q9NWB6 273 aaPredicted RBP23.8■■□□□ 1.4
CCM2-206ENST00000474617 AGTPBP1Q9UPW5 1226 aa23.8■■□□□ 1.4
CCM2-206ENST00000474617 PCDHA13Q9Y5I0 950 aa23.8■■□□□ 1.4
CCM2-206ENST00000474617 POTEB2H3BUK9 544 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 PMM2O15305 246 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 TUBBP07437 444 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 CCDC172P0C7W6 258 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 UCHL3P15374 230 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 PON1P27169 355 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 RBM10P98175 930 aaKnown RBP23.79■■□□□ 1.4
CCM2-206ENST00000474617 XKR3Q5GH77 459 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 TCERG1LQ5VWI1 586 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 HGSNATQ68CP4 663 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 KCNV1Q6PIU1 500 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 ARMC9Q7Z3E5 817 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 SRGAP1Q7Z6B7 1085 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 GOLGA1Q92805 767 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 SECISBP2LQ93073 1101 aaKnown RBP23.79■■□□□ 1.4
CCM2-206ENST00000474617 RPGRIP1Q96KN7 1286 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 SPAG5Q96R06 1193 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 CARD6Q9BX69 1037 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 SPATC1LQ9H0A9 340 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 IQCA1LA6NCM1 817 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 ADM5C9JUS6 153 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 BACH1O14867 736 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 CLIC2O15247 247 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 EXOC3O60645 756 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 TACC1O75410 805 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 RGS20O76081 388 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 EDNRBP24530 442 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 PRKCIP41743 596 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 KCNA1Q09470 495 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 ABHD15Q6UXT9 468 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 HAUS6Q7Z4H7 955 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 VPS36Q86VN1 386 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 GPR161Q8N6U8 529 aaKnown RBP23.79■■□□□ 1.4
CCM2-206ENST00000474617 RABGGTAQ92696 567 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 CDCA5Q96FF9 252 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 ALS2CR12Q96Q35 445 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 IRX2Q9BZI1 471 aaPredicted RBP23.79■■□□□ 1.4
CCM2-206ENST00000474617 FZD1Q9UP38 647 aa23.79■■□□□ 1.4
CCM2-206ENST00000474617 IGSF9BQ9UPX0 1349 aa23.78■■□□□ 1.4
CCM2-206ENST00000474617 ATG7O95352 703 aa23.78■■□□□ 1.4
CCM2-206ENST00000474617 SUPT20HL2P0C7V6 817 aa23.78■■□□□ 1.4
CCM2-206ENST00000474617 ACTR2P61160 394 aa23.78■■□□□ 1.4
CCM2-206ENST00000474617 PRKG1Q13976 671 aa23.78■■□□□ 1.4
CCM2-206ENST00000474617 UGCGQ16739 394 aa23.78■■□□□ 1.4
CCM2-206ENST00000474617 TDRD12Q587J7 1177 aaKnown RBP23.78■■□□□ 1.4
CCM2-206ENST00000474617 TREML2Q5T2D2 321 aa23.78■■□□□ 1.4
CCM2-206ENST00000474617 USP37Q86T82 979 aa23.78■■□□□ 1.4
CCM2-206ENST00000474617 CCDC155Q8N6L0 562 aa23.78■■□□□ 1.4
CCM2-206ENST00000474617 TSC1Q92574 1164 aa23.78■■□□□ 1.4
CCM2-206ENST00000474617 GCNT4Q9P109 453 aa23.78■■□□□ 1.4
CCM2-206ENST00000474617 GABBR1Q9UBS5 961 aa23.78■■□□□ 1.4
CCM2-206ENST00000474617 OSBPP22059 807 aa23.77■■□□□ 1.4
CCM2-206ENST00000474617 EPHX2P34913 555 aa23.77■■□□□ 1.4
CCM2-206ENST00000474617 MAGEA1P43355 309 aa23.77■■□□□ 1.4
CCM2-206ENST00000474617 FMO5P49326 533 aa23.77■■□□□ 1.4
CCM2-206ENST00000474617 CASP4P49662 377 aa23.77■■□□□ 1.4
CCM2-206ENST00000474617 ALDH5A1P51649 535 aaPredicted RBP23.77■■□□□ 1.4
CCM2-206ENST00000474617 KLHL30Q0D2K2 578 aa23.77■■□□□ 1.4
CCM2-206ENST00000474617 BFSP1Q12934 665 aa23.77■■□□□ 1.4
CCM2-206ENST00000474617 RAPGEF1Q13905 1077 aa23.77■■□□□ 1.4
CCM2-206ENST00000474617 SLC18A3Q16572 532 aa23.77■■□□□ 1.4
CCM2-206ENST00000474617 PAPD7Q5XG87 772 aaKnown RBP23.77■■□□□ 1.4
CCM2-206ENST00000474617 GADL1Q6ZQY3 521 aa23.77■■□□□ 1.4
CCM2-206ENST00000474617 ANO5Q75V66 913 aa23.77■■□□□ 1.4
CCM2-206ENST00000474617 XXYLT1Q8NBI6 393 aa23.77■■□□□ 1.4
CCM2-206ENST00000474617 CRACR2AQ9BSW2 395 aa23.77■■□□□ 1.4
CCM2-206ENST00000474617 NLRC4Q9NPP4 1024 aa23.77■■□□□ 1.4
CCM2-206ENST00000474617 NEDD9Q14511 834 aa23.76■■□□□ 1.39
CCM2-206ENST00000474617 ELF2Q15723 593 aa23.76■■□□□ 1.39
CCM2-206ENST00000474617 DPY19L2P1Q6NXN4 242 aa23.76■■□□□ 1.39
CCM2-206ENST00000474617 CEP170P1Q96L14 293 aa23.76■■□□□ 1.39
CCM2-206ENST00000474617 TSKSQ9UJT2 592 aa23.76■■□□□ 1.39
CCM2-206ENST00000474617 JRKLQ9Y4A0 524 aa23.76■■□□□ 1.39
CCM2-206ENST00000474617 KIAA1217Q5T5P2 1943 aa23.76■■□□□ 1.39
CCM2-206ENST00000474617 SCN4AP35499 1836 aa23.76■■□□□ 1.39
CCM2-206ENST00000474617 BTNL10A8MVZ5 291 aa23.75■■□□□ 1.39
CCM2-206ENST00000474617 PRLRP16471 622 aa23.75■■□□□ 1.39
CCM2-206ENST00000474617 FERP16591 822 aa23.75■■□□□ 1.39
CCM2-206ENST00000474617 AMPD2Q01433 879 aa23.75■■□□□ 1.39
CCM2-206ENST00000474617 CKAP4Q07065 602 aaKnown RBP23.75■■□□□ 1.39
CCM2-206ENST00000474617 FAM102BQ5T8I3 360 aa23.75■■□□□ 1.39
CCM2-206ENST00000474617 RSRC2Q7L4I2 434 aaKnown RBP23.75■■□□□ 1.39
CCM2-206ENST00000474617 PNMA8AQ86V59 439 aaPredicted RBP23.75■■□□□ 1.39
CCM2-206ENST00000474617 MAP4K3Q8IVH8 894 aa23.75■■□□□ 1.39
CCM2-206ENST00000474617 IFT74Q96LB3 600 aa23.75■■□□□ 1.39
CCM2-206ENST00000474617 ELP3Q9H9T3 547 aa23.75■■□□□ 1.39
CCM2-206ENST00000474617 ATP6V0A4Q9HBG4 840 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms