RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 JPH2Q9BR39 696 aaPredicted RBP22.88■■□□□ 1.25
PDLIM4-206ENST00000474421 TBX3O15119 743 aa22.87■■□□□ 1.25
PDLIM4-206ENST00000474421 SLC37A4O43826 429 aa22.87■■□□□ 1.25
PDLIM4-206ENST00000474421 DARSP14868 501 aaKnown RBP22.87■■□□□ 1.25
PDLIM4-206ENST00000474421 UBE3AQ05086 875 aa22.87■■□□□ 1.25
PDLIM4-206ENST00000474421 PPP2R5CQ13362 524 aa22.87■■□□□ 1.25
PDLIM4-206ENST00000474421 CAMK1Q14012 370 aa22.87■■□□□ 1.25
PDLIM4-206ENST00000474421 FAM102BQ5T8I3 360 aa22.87■■□□□ 1.25
PDLIM4-206ENST00000474421 NLRP7Q8WX94 980 aa22.87■■□□□ 1.25
PDLIM4-206ENST00000474421 BRMS1Q9HCU9 246 aa22.87■■□□□ 1.25
PDLIM4-206ENST00000474421 KCNMB3Q9NPA1 279 aa22.87■■□□□ 1.25
PDLIM4-206ENST00000474421 DDX11L8A8MPP1 907 aa22.86■■□□□ 1.25
PDLIM4-206ENST00000474421 IL9P15248 144 aa22.86■■□□□ 1.25
PDLIM4-206ENST00000474421 PIK3AP1Q6ZUJ8 805 aa22.86■■□□□ 1.25
PDLIM4-206ENST00000474421 POF1BQ8WVV4 589 aa22.86■■□□□ 1.25
PDLIM4-206ENST00000474421 GCOM2Q9BZD3 368 aaPredicted RBP22.86■■□□□ 1.25
PDLIM4-206ENST00000474421 TMEM117Q9H0C3 514 aa22.86■■□□□ 1.25
PDLIM4-206ENST00000474421 DACT1Q9NYF0 836 aa22.86■■□□□ 1.25
PDLIM4-206ENST00000474421 IGKV6-21A0A0C4DH24 114 aa22.85■■□□□ 1.25
PDLIM4-206ENST00000474421 MARCH6O60337 910 aa22.85■■□□□ 1.25
PDLIM4-206ENST00000474421 CCNT1O60563 726 aaKnown RBP22.85■■□□□ 1.25
PDLIM4-206ENST00000474421 STBD1O95210 358 aa22.85■■□□□ 1.25
PDLIM4-206ENST00000474421 CTDNEP1O95476 244 aa22.85■■□□□ 1.25
PDLIM4-206ENST00000474421 QARSP47897 775 aaKnown RBP22.85■■□□□ 1.25
PDLIM4-206ENST00000474421 EXOC8Q8IYI6 725 aa22.85■■□□□ 1.25
PDLIM4-206ENST00000474421 ABI1Q8IZP0 508 aa22.85■■□□□ 1.25
PDLIM4-206ENST00000474421 GJD3Q8N144 294 aa22.85■■□□□ 1.25
PDLIM4-206ENST00000474421 PRKAG3Q9UGI9 489 aa22.85■■□□□ 1.25
PDLIM4-206ENST00000474421 VAV3Q9UKW4 847 aa22.85■■□□□ 1.25
PDLIM4-206ENST00000474421 MAFO75444 373 aaPredicted RBP22.84■■□□□ 1.25
PDLIM4-206ENST00000474421 CSPG5O95196 566 aa22.84■■□□□ 1.25
PDLIM4-206ENST00000474421 FGFR1P11362 822 aa22.84■■□□□ 1.25
PDLIM4-206ENST00000474421 LAG3P18627 525 aa22.84■■□□□ 1.25
PDLIM4-206ENST00000474421 DNAJB1P25685 340 aa22.84■■□□□ 1.25
PDLIM4-206ENST00000474421 SSTR3P32745 418 aaPredicted RBP22.84■■□□□ 1.25
PDLIM4-206ENST00000474421 KRT2P35908 639 aa22.84■■□□□ 1.25
PDLIM4-206ENST00000474421 LTBRP36941 435 aa22.84■■□□□ 1.25
PDLIM4-206ENST00000474421 OXER1Q8TDS5 423 aa22.84■■□□□ 1.25
PDLIM4-206ENST00000474421 GTF3C6Q969F1 213 aa22.84■■□□□ 1.25
PDLIM4-206ENST00000474421 CEP89Q96ST8 783 aa22.84■■□□□ 1.25
PDLIM4-206ENST00000474421 INO80BQ9C086 356 aaPredicted RBP22.84■■□□□ 1.25
PDLIM4-206ENST00000474421 IGFLR1Q9H665 355 aa22.84■■□□□ 1.25
PDLIM4-206ENST00000474421 TYW1Q9NV66 732 aaKnown RBP22.84■■□□□ 1.25
PDLIM4-206ENST00000474421 PPME1Q9Y570 386 aa22.84■■□□□ 1.25
PDLIM4-206ENST00000474421 PLXNA4Q9HCM2 1894 aa22.83■■□□□ 1.25
PDLIM4-206ENST00000474421 BAG4O95429 457 aaKnown RBP22.83■■□□□ 1.25
PDLIM4-206ENST00000474421 P4HBP07237 508 aaKnown RBP22.83■■□□□ 1.25
PDLIM4-206ENST00000474421 COL9A1P20849 921 aa22.83■■□□□ 1.25
PDLIM4-206ENST00000474421 PDE12Q6L8Q7 609 aaKnown RBP22.83■■□□□ 1.25
PDLIM4-206ENST00000474421 ZNF410Q86VK4 478 aa22.83■■□□□ 1.25
PDLIM4-206ENST00000474421 ECHDC2Q86YB7 292 aa22.83■■□□□ 1.25
PDLIM4-206ENST00000474421 SLFN12Q8IYM2 578 aa22.83■■□□□ 1.25
PDLIM4-206ENST00000474421 THNSL1Q8IYQ7 743 aa22.83■■□□□ 1.25
PDLIM4-206ENST00000474421 COLGALT1Q8NBJ5 622 aa22.83■■□□□ 1.25
PDLIM4-206ENST00000474421 ZNF668Q96K58 619 aaPredicted RBP22.83■■□□□ 1.25
PDLIM4-206ENST00000474421 CHST12Q9NRB3 414 aa22.83■■□□□ 1.25
PDLIM4-206ENST00000474421 GJB4Q9NTQ9 266 aa22.83■■□□□ 1.25
PDLIM4-206ENST00000474421 SUCLA2Q9P2R7 463 aaPredicted RBP22.83■■□□□ 1.25
PDLIM4-206ENST00000474421 A0A0U1RQF3 1178 aa22.82■■□□□ 1.24
PDLIM4-206ENST00000474421 FSD2A1L4K1 749 aa22.82■■□□□ 1.24
PDLIM4-206ENST00000474421 TMEM150BA6NC51 233 aa22.82■■□□□ 1.24
PDLIM4-206ENST00000474421 EML1O00423 815 aa22.82■■□□□ 1.24
PDLIM4-206ENST00000474421 FGF18O76093 207 aa22.82■■□□□ 1.24
PDLIM4-206ENST00000474421 EOMESO95936 686 aa22.82■■□□□ 1.24
PDLIM4-206ENST00000474421 SFPQP23246 707 aaKnown RBP eCLIP22.82■■□□□ 1.24
PDLIM4-206ENST00000474421 ADAM15Q13444 863 aa22.82■■□□□ 1.24
PDLIM4-206ENST00000474421 DRP2Q13474 957 aa22.82■■□□□ 1.24
PDLIM4-206ENST00000474421 ME3Q16798 604 aa22.82■■□□□ 1.24
PDLIM4-206ENST00000474421 ANO5Q75V66 913 aa22.82■■□□□ 1.24
PDLIM4-206ENST00000474421 LRRC43Q8N309 656 aa22.82■■□□□ 1.24
PDLIM4-206ENST00000474421 EFHBQ8N7U6 833 aa22.82■■□□□ 1.24
PDLIM4-206ENST00000474421 NECAB1Q8N987 351 aa22.82■■□□□ 1.24
PDLIM4-206ENST00000474421 SLC7A3Q8WY07 619 aa22.82■■□□□ 1.24
PDLIM4-206ENST00000474421 RSPH1Q8WYR4 309 aa22.82■■□□□ 1.24
PDLIM4-206ENST00000474421 EPHX3Q9H6B9 360 aa22.82■■□□□ 1.24
PDLIM4-206ENST00000474421 CYP26B1Q9NR63 512 aa22.82■■□□□ 1.24
PDLIM4-206ENST00000474421 TLR9Q9NR96 1032 aa22.82■■□□□ 1.24
PDLIM4-206ENST00000474421 FDPSP14324 419 aaKnown RBP22.81■■□□□ 1.24
PDLIM4-206ENST00000474421 IRS1P35568 1242 aa22.81■■□□□ 1.24
PDLIM4-206ENST00000474421 NDUFV1P49821 464 aa22.81■■□□□ 1.24
PDLIM4-206ENST00000474421 NEK4P51957 841 aa22.81■■□□□ 1.24
PDLIM4-206ENST00000474421 EPHA7Q15375 998 aa22.81■■□□□ 1.24
PDLIM4-206ENST00000474421 MICAL1Q8TDZ2 1067 aa22.81■■□□□ 1.24
PDLIM4-206ENST00000474421 HAS1Q92839 578 aa22.81■■□□□ 1.24
PDLIM4-206ENST00000474421 CASD1Q96PB1 797 aa22.81■■□□□ 1.24
PDLIM4-206ENST00000474421 CWH43Q9H720 699 aa22.81■■□□□ 1.24
PDLIM4-206ENST00000474421 CD320Q9NPF0 282 aa22.81■■□□□ 1.24
PDLIM4-206ENST00000474421 PUF60Q9UHX1 559 aaKnown RBP22.81■■□□□ 1.24
PDLIM4-206ENST00000474421 CD207Q9UJ71 328 aa22.81■■□□□ 1.24
PDLIM4-206ENST00000474421 LZTS1Q9Y250 596 aa22.81■■□□□ 1.24
PDLIM4-206ENST00000474421 A0A087WZ62 844 aa22.8■■□□□ 1.24
PDLIM4-206ENST00000474421 PI4K2BG5E9Z4 385 aa22.8■■□□□ 1.24
PDLIM4-206ENST00000474421 SKIP12755 728 aa22.8■■□□□ 1.24
PDLIM4-206ENST00000474421 GTF2F1P35269 517 aaKnown RBP eCLIP22.8■■□□□ 1.24
PDLIM4-206ENST00000474421 PPM1AP35813 382 aa22.8■■□□□ 1.24
PDLIM4-206ENST00000474421 SMAD4Q13485 552 aaKnown RBP22.8■■□□□ 1.24
PDLIM4-206ENST00000474421 TRIM29Q14134 588 aa22.8■■□□□ 1.24
PDLIM4-206ENST00000474421 SMAD2Q15796 467 aaKnown RBP22.8■■□□□ 1.24
PDLIM4-206ENST00000474421 RHPN2Q8IUC4 686 aa22.8■■□□□ 1.24
PDLIM4-206ENST00000474421 RNF169Q8NCN4 708 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms