RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 GPBAR1Q8TDU6 330 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 TCHPQ9BT92 498 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 SELENOOQ9BVL4 669 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 RABEP2Q9H5N1 569 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 MIS18AQ9NYP9 233 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 CTNNAL1Q9UBT7 734 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 L3MBTL1Q9Y468 752 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 FAM208AQ9UK61 1670 aaKnown RBP5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 SBF2Q86WG5 1849 aa5.62□□□□□ -1.51
TMEM39A-206ENST00000473684 FSCN2O14926 492 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 CDK8P49336 464 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 AKAP17AQ02040 695 aaKnown RBP5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 ZNF268Q14587 947 aaPredicted RBP5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 WDR78Q5VTH9 848 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 PPP4R3AQ6IN85 833 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 SDE2Q6IQ49 451 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 CCDC73Q6ZRK6 1079 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 C8orf86Q6ZUL3 223 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 RUFY3Q7L099 469 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 SAPCD2Q86UD0 394 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 JAZF1Q86VZ6 243 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 NLGN1Q8N2Q7 840 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 KIFAP3Q92845 792 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 CYFIP2Q96F07 1278 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 TRIM11Q96F44 468 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 NAF1Q96HR8 494 aaKnown RBP5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 NAPGQ99747 312 aaPredicted RBP5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 FAM192AQ9GZU8 254 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 KRT82Q9NSB4 513 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 QPCTLQ9NXS2 382 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 FAM184BQ9ULE4 1060 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 RABL2BQ9UNT1 228 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 ZNF148Q9UQR1 794 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 ITM2BQ9Y287 266 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 SH3GLB1Q9Y371 365 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 PCDHB14Q9Y5E9 798 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 ADAMTS13Q76LX8 1427 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 ZNF831Q5JPB2 1677 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 PFDN1O60925 122 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 LILRB5O75023 590 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 SMARCA1P28370 1054 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 AK2P54819 239 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 LARP1BQ659C4 914 aaKnown RBP5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 HIBCHQ6NVY1 386 aaPredicted RBP5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 FAM117BQ6P1L5 589 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 ZNF365Q70YC5 407 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 RPAP2Q8IXW5 612 aaPredicted RBP5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 CNBD1Q8NA66 436 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 NSUN7Q8NE18 718 aaKnown RBP5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 TSR2Q969E8 191 aaKnown RBP5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 PGBD1Q96JS3 809 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 FGD4Q96M96 766 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 SMC6Q96SB8 1091 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 ZC3H12CQ9C0D7 883 aaKnown RBP5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 ZCWPW1Q9H0M4 648 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 NDST4Q9H3R1 872 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 CCDC86Q9H6F5 360 aaKnown RBP5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 HELLSQ9NRZ9 838 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 CFAP45Q9UL16 551 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 M0R082 166 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 GFRA2O00451 464 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 USO1O60763 962 aaKnown RBP5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 BAG3O95817 575 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 CLTAP09496 248 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 USP11P51784 963 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 SULT2A1Q06520 285 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 ADAM9Q13443 819 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 POU4F3Q15319 338 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 GLE1Q53GS7 698 aaKnown RBP5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 ANKRD20A2Q5SQ80 823 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 ANKRD20A1Q5TYW2 823 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 ANKRD20A3Q5VUR7 823 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 THOC7Q6I9Y2 204 aaKnown RBP5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 CHSY3Q70JA7 882 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 RSPH3Q86UC2 560 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 LSRQ86X29 649 aaPredicted RBP5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 ANKLE2Q86XL3 938 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 ANKRD13BQ86YJ7 626 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 PEX5LQ8IYB4 626 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 ARFGAP2Q8N6H7 521 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 CCDC63Q8NA47 563 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 ZNF417Q8TAU3 575 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 CTNNBL1Q8WYA6 563 aaPredicted RBP5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 HVCN1Q96D96 273 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 ZNF587Q96SQ5 575 aaPredicted RBP5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 MAK16Q9BXY0 300 aaKnown RBP5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 PRR36Q9H6K5 1346 aa5.61□□□□□ -1.51
TMEM39A-206ENST00000473684 CICQ96RK0 1608 aaPredicted RBP5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 E7ENQ6 273 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 BIRC5O15392 142 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 P4HA2O15460 535 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 PPIP5K2O43314 1243 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 GRIN3BO60391 1043 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 GFPT2O94808 682 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 U2AF1L5P0DN76 240 aaPredicted RBP5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 MAOBP27338 520 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 POLE2P56282 527 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 U2AF1Q01081 240 aaKnown RBP eCLIP5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 PPP1R7Q15435 360 aa5.6□□□□□ -1.51
TMEM39A-206ENST00000473684 TAF11Q15544 211 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms