RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 WNT8AQ9H1J5 351 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 PCYOX1Q9UHG3 505 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 ATP8A1Q9Y2Q0 1164 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 MYH4Q9Y623 1939 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 IRS2Q9Y4H2 1338 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 BUB1BO60566 1050 aaPredicted RBP6.62□□□□□ -1.35
HERC4-209ENST00000473533 FAM13AO94988 1023 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 EYA4O95677 639 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 KRT13P13646 458 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 GALCP54803 685 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 LACTBP83111 547 aaPredicted RBP6.62□□□□□ -1.35
HERC4-209ENST00000473533 PPP1R7Q15435 360 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 MFSD5Q6N075 450 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.62□□□□□ -1.35
HERC4-209ENST00000473533 BARGINQ6ZT62 677 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 FAM186BQ8IYM0 893 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 GRK7Q8WTQ7 553 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 CCDC77Q9BR77 488 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 ANO3Q9BYT9 981 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 TXLNGYQ9BZA5 131 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 UBA5Q9GZZ9 404 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 DPH5Q9H2P9 285 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 JMJD4Q9H9V9 463 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 ATF5Q9Y2D1 282 aaPredicted RBP6.62□□□□□ -1.35
HERC4-209ENST00000473533 SPATA31A1Q5TZJ5 1347 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 E9PMD0 336 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 RARGP13631 454 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 IL1R1P14778 569 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 CLNS1AP54105 237 aaKnown RBP6.62□□□□□ -1.35
HERC4-209ENST00000473533 PRPF4BQ13523 1007 aaKnown RBP6.62□□□□□ -1.35
HERC4-209ENST00000473533 TRPM8Q7Z2W7 1104 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 KCNK18Q7Z418 384 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 PIGWQ7Z7B1 504 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 JAMLQ86YT9 394 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 ADGRF4Q8IZF3 695 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 SLC44A5Q8NCS7 719 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 OSBPL7Q9BZF2 842 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 TUFT1Q9NNX1 390 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 USP40Q9NVE5 1235 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 HAUS2Q9NVX0 235 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 NOP53Q9NZM5 478 aaKnown RBP6.62□□□□□ -1.35
HERC4-209ENST00000473533 TBC1D7Q9P0N9 293 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 TRPC6Q9Y210 931 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 PCDHB13Q9Y5F0 798 aa6.62□□□□□ -1.35
HERC4-209ENST00000473533 IGKV6D-41A0A0C4DH26 115 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 SPDYE3A6NKU9 549 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 RASGRF2O14827 1237 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 PPIP5K2O43314 1243 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 GCNT3O95395 438 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 VIMP08670 466 aaKnown RBP6.61□□□□□ -1.35
HERC4-209ENST00000473533 CHN1P15882 459 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 SLC9A1P19634 815 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 SNRPFP62306 86 aaKnown RBP6.61□□□□□ -1.35
HERC4-209ENST00000473533 GIT2Q14161 759 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 PLS1Q14651 629 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 ZKSCAN8Q15776 578 aaPredicted RBP6.61□□□□□ -1.35
HERC4-209ENST00000473533 SFR1Q86XK3 245 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 SLC35G2Q8TBE7 412 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 SERPINB12Q96P63 405 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 FOXP3Q9BZS1 431 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 GGA1Q9UJY5 639 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 TPX2Q9ULW0 747 aaKnown RBP6.61□□□□□ -1.35
HERC4-209ENST00000473533 SLC12A4Q9UP95 1085 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 RABGAP1Q9Y3P9 1069 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 FRMPD2Q68DX3 1309 aaPredicted RBP6.61□□□□□ -1.35
HERC4-209ENST00000473533 POTEB3A0JP26 581 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 POTECB2RU33 542 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 EVI5O60447 810 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 ATP6V1G2O95670 118 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 CCND1P24385 295 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 KLRK1P26718 216 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 TMOD1P28289 359 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 SKIV2L2P42285 1042 aaKnown RBP6.61□□□□□ -1.35
HERC4-209ENST00000473533 ATP11AP98196 1134 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 POU5F1Q01860 360 aaKnown RBP6.61□□□□□ -1.35
HERC4-209ENST00000473533 PPATQ06203 517 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 NR1H3Q13133 447 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 SLC4A8Q2Y0W8 1093 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 CCDC38Q502W7 563 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 TBC1D9BQ66K14 1250 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 HIBCHQ6NVY1 386 aaPredicted RBP6.61□□□□□ -1.35
HERC4-209ENST00000473533 POTEBQ6S5H4 581 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 C3orf67Q6ZVT6 689 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 SLC30A5Q8TAD4 765 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 RPGRQ92834 1020 aaKnown RBP6.61□□□□□ -1.35
HERC4-209ENST00000473533 ZNF622Q969S3 477 aaKnown RBP eCLIP6.61□□□□□ -1.35
HERC4-209ENST00000473533 SLC35C1Q96A29 364 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 FAM81BQ96LP2 452 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 CD248Q9HCU0 757 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 GPCPD1Q9NPB8 672 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 SUFUQ9UMX1 484 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 MYH14Q7Z406 1995 aaKnown RBP6.61□□□□□ -1.35
HERC4-209ENST00000473533 DDX3XO00571 662 aaKnown RBP eCLIP6.61□□□□□ -1.35
HERC4-209ENST00000473533 KIF3CO14782 793 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 LIN7AO14910 233 aaPredicted RBP6.61□□□□□ -1.35
HERC4-209ENST00000473533 ELF3P78545 371 aaPredicted RBP6.61□□□□□ -1.35
HERC4-209ENST00000473533 KIF22Q14807 665 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 DIXDC1Q155Q3 683 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 PPP1R21Q6ZMI0 780 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 SLC17A8Q8NDX2 589 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms