RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 TCEAL9Q9UHQ7 104 aa12.69□□□□□ -0.38
ACTB-209ENST00000473257 PCDHA10Q9Y5I2 948 aa12.69□□□□□ -0.38
ACTB-209ENST00000473257 SNX14Q9Y5W7 946 aa12.69□□□□□ -0.38
ACTB-209ENST00000473257 MYO15AQ9UKN7 3530 aa12.68□□□□□ -0.38
ACTB-209ENST00000473257 hCG_1984214I3L0E3 225 aa12.68□□□□□ -0.38
ACTB-209ENST00000473257 OATP04181 439 aa12.68□□□□□ -0.38
ACTB-209ENST00000473257 ATF7P17544 494 aaPredicted RBP12.68□□□□□ -0.38
ACTB-209ENST00000473257 LAG3P18627 525 aa12.68□□□□□ -0.38
ACTB-209ENST00000473257 CCT2P78371 535 aaKnown RBP12.68□□□□□ -0.38
ACTB-209ENST00000473257 CBX2Q14781 532 aaPredicted RBP12.68□□□□□ -0.38
ACTB-209ENST00000473257 TSGA10IPQ3SY00 556 aa12.68□□□□□ -0.38
ACTB-209ENST00000473257 ANKRD54Q6NXT1 300 aa12.68□□□□□ -0.38
ACTB-209ENST00000473257 KCNT2Q6UVM3 1135 aa12.68□□□□□ -0.38
ACTB-209ENST00000473257 ECHDC2Q86YB7 292 aa12.68□□□□□ -0.38
ACTB-209ENST00000473257 C12orf76Q8N812 135 aaPredicted RBP12.68□□□□□ -0.38
ACTB-209ENST00000473257 ZNF713Q8N859 430 aaPredicted RBP12.68□□□□□ -0.38
ACTB-209ENST00000473257 MRPS27Q92552 414 aaKnown RBP12.68□□□□□ -0.38
ACTB-209ENST00000473257 SCLT1Q96NL6 688 aa12.68□□□□□ -0.38
ACTB-209ENST00000473257 TMEM117Q9H0C3 514 aa12.68□□□□□ -0.38
ACTB-209ENST00000473257 UNC45AQ9H3U1 944 aa12.68□□□□□ -0.38
ACTB-209ENST00000473257 C6orf50Q9HD87 102 aa12.68□□□□□ -0.38
ACTB-209ENST00000473257 TBC1D22BQ9NU19 505 aa12.68□□□□□ -0.38
ACTB-209ENST00000473257 WDR81Q562E7 1941 aa12.67□□□□□ -0.38
ACTB-209ENST00000473257 ESYT2A0FGR8 921 aa12.67□□□□□ -0.38
ACTB-209ENST00000473257 CDC45O75419 566 aa12.67□□□□□ -0.38
ACTB-209ENST00000473257 CA8P35219 290 aa12.67□□□□□ -0.38
ACTB-209ENST00000473257 UBE3AQ05086 875 aa12.67□□□□□ -0.38
ACTB-209ENST00000473257 KCNC3Q14003 757 aa12.67□□□□□ -0.38
ACTB-209ENST00000473257 TMC7Q7Z402 723 aa12.67□□□□□ -0.38
ACTB-209ENST00000473257 TMEM173Q86WV6 379 aaPredicted RBP12.67□□□□□ -0.38
ACTB-209ENST00000473257 LPPQ93052 612 aa12.67□□□□□ -0.38
ACTB-209ENST00000473257 CCDC136Q96JN2 1154 aa12.67□□□□□ -0.38
ACTB-209ENST00000473257 ZNF558Q96NG5 402 aa12.67□□□□□ -0.38
ACTB-209ENST00000473257 GLT8D2Q9H1C3 349 aa12.67□□□□□ -0.38
ACTB-209ENST00000473257 DISC1Q9NRI5 854 aa12.67□□□□□ -0.38
ACTB-209ENST00000473257 DMDP11532 3685 aa12.67□□□□□ -0.38
ACTB-209ENST00000473257 MEIS3P2A8K0S8 358 aa12.66□□□□□ -0.38
ACTB-209ENST00000473257 WDR64B1ANS9 1081 aa12.66□□□□□ -0.38
ACTB-209ENST00000473257 PRPF3O43395 683 aaKnown RBP12.66□□□□□ -0.38
ACTB-209ENST00000473257 TDP2O95551 362 aa12.66□□□□□ -0.38
ACTB-209ENST00000473257 DARSP14868 501 aaKnown RBP12.66□□□□□ -0.38
ACTB-209ENST00000473257 EIF4BP23588 611 aaKnown RBP12.66□□□□□ -0.38
ACTB-209ENST00000473257 CIITAP33076 1130 aa12.66□□□□□ -0.38
ACTB-209ENST00000473257 GPC3P51654 580 aa12.66□□□□□ -0.38
ACTB-209ENST00000473257 SETQ01105 290 aaPredicted RBP12.66□□□□□ -0.38
ACTB-209ENST00000473257 TCF15Q12870 199 aa12.66□□□□□ -0.38
ACTB-209ENST00000473257 KRT32Q14532 448 aa12.66□□□□□ -0.38
ACTB-209ENST00000473257 NTRK3Q16288 839 aa12.66□□□□□ -0.38
ACTB-209ENST00000473257 MTERF2Q49AM1 385 aa12.66□□□□□ -0.38
ACTB-209ENST00000473257 ZNF598Q86UK7 904 aaKnown RBP12.66□□□□□ -0.38
ACTB-209ENST00000473257 KSR1Q8IVT5 923 aa12.66□□□□□ -0.38
ACTB-209ENST00000473257 SMAP1Q8IYB5 467 aaPredicted RBP12.66□□□□□ -0.38
ACTB-209ENST00000473257 ABI1Q8IZP0 508 aa12.66□□□□□ -0.38
ACTB-209ENST00000473257 BCL7CQ8WUZ0 217 aaPredicted RBP12.66□□□□□ -0.38
ACTB-209ENST00000473257 NLRP7Q8WX94 980 aa12.66□□□□□ -0.38
ACTB-209ENST00000473257 ASIC4Q96FT7 647 aa12.66□□□□□ -0.38
ACTB-209ENST00000473257 AIFM3Q96NN9 605 aa12.66□□□□□ -0.38
ACTB-209ENST00000473257 MAP7D2Q96T17 732 aa12.66□□□□□ -0.38
ACTB-209ENST00000473257 ELAC1Q9H777 363 aaKnown RBP12.66□□□□□ -0.38
ACTB-209ENST00000473257 SPG21Q9NZD8 308 aa12.66□□□□□ -0.38
ACTB-209ENST00000473257 SPTBN4Q9H254 2564 aa12.66□□□□□ -0.38
ACTB-209ENST00000473257 MYO10Q9HD67 2058 aa12.65□□□□□ -0.38
ACTB-209ENST00000473257 MAGEB2O15479 319 aa12.65□□□□□ -0.38
ACTB-209ENST00000473257 B4GALT3O60512 393 aa12.65□□□□□ -0.38
ACTB-209ENST00000473257 GAS7O60861 476 aa12.65□□□□□ -0.38
ACTB-209ENST00000473257 STBD1O95210 358 aa12.65□□□□□ -0.38
ACTB-209ENST00000473257 ZSCAN20P17040 1043 aaPredicted RBP12.65□□□□□ -0.38
ACTB-209ENST00000473257 RPS6KB1P23443 525 aa12.65□□□□□ -0.38
ACTB-209ENST00000473257 PLCB3Q01970 1234 aa12.65□□□□□ -0.38
ACTB-209ENST00000473257 PTPN21Q16825 1174 aa12.65□□□□□ -0.38
ACTB-209ENST00000473257 ODR4Q5SWX8 454 aa12.65□□□□□ -0.38
ACTB-209ENST00000473257 LRCH2Q5VUJ6 765 aa12.65□□□□□ -0.38
ACTB-209ENST00000473257 BLOC1S2Q6QNY1 142 aa12.65□□□□□ -0.38
ACTB-209ENST00000473257 SLC39A11Q8N1S5 342 aa12.65□□□□□ -0.38
ACTB-209ENST00000473257 LRRC43Q8N309 656 aa12.65□□□□□ -0.38
ACTB-209ENST00000473257 FBXL6Q8N531 539 aa12.65□□□□□ -0.38
ACTB-209ENST00000473257 SLC5A5Q92911 643 aa12.65□□□□□ -0.38
ACTB-209ENST00000473257 KCNB2Q92953 911 aa12.65□□□□□ -0.38
ACTB-209ENST00000473257 POMKQ9H5K3 350 aa12.65□□□□□ -0.38
ACTB-209ENST00000473257 SEPT9Q9UHD8 586 aaPredicted RBP12.65□□□□□ -0.38
ACTB-209ENST00000473257 PUF60Q9UHX1 559 aaKnown RBP12.65□□□□□ -0.38
ACTB-209ENST00000473257 KMT2EQ8IZD2 1858 aa12.64□□□□□ -0.39
ACTB-209ENST00000473257 A0A087WZ62 844 aa12.64□□□□□ -0.39
ACTB-209ENST00000473257 CCDC196A0A1B0GTZ2 297 aa12.64□□□□□ -0.39
ACTB-209ENST00000473257 C2orf71A6NGG8 1288 aa12.64□□□□□ -0.39
ACTB-209ENST00000473257 C2CD4DB7Z1M9 353 aa12.64□□□□□ -0.39
ACTB-209ENST00000473257 CLASP2O75122 1294 aaKnown RBP12.64□□□□□ -0.39
ACTB-209ENST00000473257 ASGR2P07307 311 aa12.64□□□□□ -0.39
ACTB-209ENST00000473257 PDIA3P30101 505 aaKnown RBP12.64□□□□□ -0.39
ACTB-209ENST00000473257 RCAN1P53805 252 aa12.64□□□□□ -0.39
ACTB-209ENST00000473257 BCAR1P56945 870 aa12.64□□□□□ -0.39
ACTB-209ENST00000473257 AKAP17AQ02040 695 aaKnown RBP12.64□□□□□ -0.39
ACTB-209ENST00000473257 TBC1D8BQ0IIM8 1120 aa12.64□□□□□ -0.39
ACTB-209ENST00000473257 TARBP2Q15633 366 aaKnown RBP12.64□□□□□ -0.39
ACTB-209ENST00000473257 RARS2Q5T160 578 aaKnown RBP12.64□□□□□ -0.39
ACTB-209ENST00000473257 PLA2G4FQ68DD2 849 aa12.64□□□□□ -0.39
ACTB-209ENST00000473257 BMP8AQ7Z5Y6 402 aa12.64□□□□□ -0.39
ACTB-209ENST00000473257 ZBTB33Q86T24 672 aa12.64□□□□□ -0.39
ACTB-209ENST00000473257 SUGP1Q8IWZ8 645 aaKnown RBP12.64□□□□□ -0.39
ACTB-209ENST00000473257 ZNF579Q8NAF0 562 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms