RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 FAM205CA6NFA0 338 aa23.29■■□□□ 1.32
EPHB3-202ENST00000473079 BTBD18B2RXH4 712 aa23.29■■□□□ 1.32
EPHB3-202ENST00000473079 MARCH6O60337 910 aa23.29■■□□□ 1.32
EPHB3-202ENST00000473079 SPIRE1Q08AE8 756 aa23.29■■□□□ 1.32
EPHB3-202ENST00000473079 ST3GAL1Q11201 340 aa23.29■■□□□ 1.32
EPHB3-202ENST00000473079 DRP2Q13474 957 aa23.29■■□□□ 1.32
EPHB3-202ENST00000473079 TRIM29Q14134 588 aa23.29■■□□□ 1.32
EPHB3-202ENST00000473079 PAN2Q504Q3 1202 aaKnown RBP23.29■■□□□ 1.32
EPHB3-202ENST00000473079 TCEAL5Q5H9L2 206 aa23.29■■□□□ 1.32
EPHB3-202ENST00000473079 DIS3L2Q8IYB7 885 aaKnown RBP23.29■■□□□ 1.32
EPHB3-202ENST00000473079 ATP6V0A4Q9HBG4 840 aa23.29■■□□□ 1.32
EPHB3-202ENST00000473079 MUC3AQ02505 3323 aa23.28■■□□□ 1.32
EPHB3-202ENST00000473079 NCK2O43639 380 aa23.28■■□□□ 1.32
EPHB3-202ENST00000473079 ZSCAN20P17040 1043 aaPredicted RBP23.28■■□□□ 1.32
EPHB3-202ENST00000473079 GATMP50440 423 aa23.28■■□□□ 1.32
EPHB3-202ENST00000473079 LEXMQ3ZCV2 418 aa23.28■■□□□ 1.32
EPHB3-202ENST00000473079 C4orf19Q8IY42 314 aa23.28■■□□□ 1.32
EPHB3-202ENST00000473079 EXOC8Q8IYI6 725 aa23.28■■□□□ 1.32
EPHB3-202ENST00000473079 NLRP7Q8WX94 980 aa23.28■■□□□ 1.32
EPHB3-202ENST00000473079 PABPC5Q96DU9 382 aaKnown RBP23.28■■□□□ 1.32
EPHB3-202ENST00000473079 LLPHQ9BRT6 129 aaKnown RBP23.28■■□□□ 1.32
EPHB3-202ENST00000473079 GCOM2Q9BZD3 368 aaPredicted RBP23.28■■□□□ 1.32
EPHB3-202ENST00000473079 CYP26B1Q9NR63 512 aa23.28■■□□□ 1.32
EPHB3-202ENST00000473079 CAMK1Q14012 370 aa23.27■■□□□ 1.32
EPHB3-202ENST00000473079 C8orf34Q49A92 452 aa23.27■■□□□ 1.32
EPHB3-202ENST00000473079 FAM102BQ5T8I3 360 aa23.27■■□□□ 1.32
EPHB3-202ENST00000473079 ZNF410Q86VK4 478 aa23.27■■□□□ 1.32
EPHB3-202ENST00000473079 SPPL3Q8TCT6 385 aa23.27■■□□□ 1.32
EPHB3-202ENST00000473079 NEK9Q8TD19 979 aa23.27■■□□□ 1.32
EPHB3-202ENST00000473079 KIF2CQ99661 725 aa23.27■■□□□ 1.32
EPHB3-202ENST00000473079 SH2D3AQ9BRG2 576 aa23.27■■□□□ 1.32
EPHB3-202ENST00000473079 ALG13Q9NP73 1137 aaKnown RBP23.27■■□□□ 1.32
EPHB3-202ENST00000473079 SUCLA2Q9P2R7 463 aaPredicted RBP23.27■■□□□ 1.32
EPHB3-202ENST00000473079 WRAP73Q9P2S5 460 aaPredicted RBP23.27■■□□□ 1.32
EPHB3-202ENST00000473079 HOXA2O43364 376 aa23.26■■□□□ 1.31
EPHB3-202ENST00000473079 ITGB1P05556 798 aa23.26■■□□□ 1.31
EPHB3-202ENST00000473079 KLHL23Q8NBE8 558 aa23.26■■□□□ 1.31
EPHB3-202ENST00000473079 ZNF668Q96K58 619 aaPredicted RBP23.26■■□□□ 1.31
EPHB3-202ENST00000473079 ZSCAN31Q96LW9 406 aaPredicted RBP23.26■■□□□ 1.31
EPHB3-202ENST00000473079 SCLT1Q96NL6 688 aa23.26■■□□□ 1.31
EPHB3-202ENST00000473079 INO80BQ9C086 356 aaPredicted RBP23.26■■□□□ 1.31
EPHB3-202ENST00000473079 ZSWIM4Q9H7M6 989 aa23.26■■□□□ 1.31
EPHB3-202ENST00000473079 CHST12Q9NRB3 414 aa23.26■■□□□ 1.31
EPHB3-202ENST00000473079 AAASQ9NRG9 546 aa23.26■■□□□ 1.31
EPHB3-202ENST00000473079 TBKBP1A7MCY6 615 aa23.25■■□□□ 1.31
EPHB3-202ENST00000473079 KCNA5P22460 613 aa23.25■■□□□ 1.31
EPHB3-202ENST00000473079 PUS10Q3MIT2 529 aaKnown RBP23.25■■□□□ 1.31
EPHB3-202ENST00000473079 PLA2G4FQ68DD2 849 aa23.25■■□□□ 1.31
EPHB3-202ENST00000473079 OTUD6AQ7L8S5 288 aa23.25■■□□□ 1.31
EPHB3-202ENST00000473079 ECHDC2Q86YB7 292 aa23.25■■□□□ 1.31
EPHB3-202ENST00000473079 SLC7A3Q8WY07 619 aa23.25■■□□□ 1.31
EPHB3-202ENST00000473079 NECAB3Q96P71 396 aaPredicted RBP23.25■■□□□ 1.31
EPHB3-202ENST00000473079 LXNQ9BS40 222 aa23.25■■□□□ 1.31
EPHB3-202ENST00000473079 TRAIPQ9BWF2 469 aa23.25■■□□□ 1.31
EPHB3-202ENST00000473079 TMEM117Q9H0C3 514 aa23.25■■□□□ 1.31
EPHB3-202ENST00000473079 DHX33Q9H6R0 707 aaKnown RBP23.25■■□□□ 1.31
EPHB3-202ENST00000473079 PCDHA12Q9UN75 941 aa23.25■■□□□ 1.31
EPHB3-202ENST00000473079 PCDHB12Q9Y5F1 795 aa23.25■■□□□ 1.31
EPHB3-202ENST00000473079 A0A087WZ62 844 aa23.24■■□□□ 1.31
EPHB3-202ENST00000473079 A0A0U1RQF3 1178 aa23.24■■□□□ 1.31
EPHB3-202ENST00000473079 SLITRK3O94933 977 aa23.24■■□□□ 1.31
EPHB3-202ENST00000473079 EOMESO95936 686 aa23.24■■□□□ 1.31
EPHB3-202ENST00000473079 YWHABP31946 246 aaKnown RBP23.24■■□□□ 1.31
EPHB3-202ENST00000473079 RFC5P40937 340 aa23.24■■□□□ 1.31
EPHB3-202ENST00000473079 NPEPPSP55786 919 aa23.24■■□□□ 1.31
EPHB3-202ENST00000473079 CALCRLQ16602 461 aa23.24■■□□□ 1.31
EPHB3-202ENST00000473079 CTC1Q2NKJ3 1217 aa23.24■■□□□ 1.31
EPHB3-202ENST00000473079 NCAPH2Q6IBW4 605 aa23.24■■□□□ 1.31
EPHB3-202ENST00000473079 RHPN2Q8IUC4 686 aa23.24■■□□□ 1.31
EPHB3-202ENST00000473079 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.24■■□□□ 1.31
EPHB3-202ENST00000473079 CEP170P1Q96L14 293 aa23.24■■□□□ 1.31
EPHB3-202ENST00000473079 FDXACB1Q9BRP7 624 aaPredicted RBP23.24■■□□□ 1.31
EPHB3-202ENST00000473079 TYW1Q9NV66 732 aaKnown RBP23.24■■□□□ 1.31
EPHB3-202ENST00000473079 DACT1Q9NYF0 836 aa23.24■■□□□ 1.31
EPHB3-202ENST00000473079 RGL1Q9NZL6 768 aa23.24■■□□□ 1.31
EPHB3-202ENST00000473079 GAS2O43903 313 aaKnown RBP23.23■■□□□ 1.31
EPHB3-202ENST00000473079 LYPLA2O95372 231 aa23.23■■□□□ 1.31
EPHB3-202ENST00000473079 FGFR1P11362 822 aa23.23■■□□□ 1.31
EPHB3-202ENST00000473079 IBSPP21815 317 aaPredicted RBP23.23■■□□□ 1.31
EPHB3-202ENST00000473079 DNAJB1P25685 340 aa23.23■■□□□ 1.31
EPHB3-202ENST00000473079 UBE3AQ05086 875 aa23.23■■□□□ 1.31
EPHB3-202ENST00000473079 SAFBQ15424 915 aaKnown RBP eCLIP23.23■■□□□ 1.31
EPHB3-202ENST00000473079 CSPP1Q1MSJ5 1256 aa23.23■■□□□ 1.31
EPHB3-202ENST00000473079 CCDC83Q8IWF9 413 aa23.23■■□□□ 1.31
EPHB3-202ENST00000473079 ZNF579Q8NAF0 562 aaKnown RBP23.23■■□□□ 1.31
EPHB3-202ENST00000473079 DYDC2Q96IM9 177 aa23.23■■□□□ 1.31
EPHB3-202ENST00000473079 MTMR9Q96QG7 549 aa23.23■■□□□ 1.31
EPHB3-202ENST00000473079 HSD17B14Q9BPX1 270 aa23.23■■□□□ 1.31
EPHB3-202ENST00000473079 CWH43Q9H720 699 aa23.23■■□□□ 1.31
EPHB3-202ENST00000473079 RNF19AQ9NV58 838 aa23.23■■□□□ 1.31
EPHB3-202ENST00000473079 NEMFO60524 1076 aa23.22■■□□□ 1.31
EPHB3-202ENST00000473079 CSDE1O75534 798 aaKnown RBP23.22■■□□□ 1.31
EPHB3-202ENST00000473079 FGFR4P22455 802 aa23.22■■□□□ 1.31
EPHB3-202ENST00000473079 SFPQP23246 707 aaKnown RBP eCLIP23.22■■□□□ 1.31
EPHB3-202ENST00000473079 RBM25P49756 843 aaKnown RBP23.22■■□□□ 1.31
EPHB3-202ENST00000473079 HYAL1Q12794 435 aa23.22■■□□□ 1.31
EPHB3-202ENST00000473079 ZNF598Q86UK7 904 aaKnown RBP23.22■■□□□ 1.31
EPHB3-202ENST00000473079 POF1BQ8WVV4 589 aa23.22■■□□□ 1.31
EPHB3-202ENST00000473079 CASD1Q96PB1 797 aa23.22■■□□□ 1.31
EPHB3-202ENST00000473079 TTC12Q9H892 705 aaPredicted RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms