RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 CLUL1Q15846 466 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 PTPROQ16827 1216 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 CTC1Q2NKJ3 1217 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 PLA2G2CQ5R387 149 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 TTBK2Q6IQ55 1244 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 CCDC62Q6P9F0 684 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 TRIM50Q86XT4 487 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 ANKMY2Q8IV38 441 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 ADGRF4Q8IZF3 695 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 SCFD2Q8WU76 684 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 AFG1LQ8WV93 481 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 CLEC4DQ8WXI8 215 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 EDAQ92838 391 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 PIGSQ96S52 555 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 PHF20Q9BVI0 1012 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 RANBP17Q9H2T7 1088 aaKnown RBP7.23□□□□□ -1.25
HDAC1-205ENST00000472928 NSUN3Q9H649 340 aaKnown RBP7.23□□□□□ -1.25
HDAC1-205ENST00000472928 VAT1LQ9HCJ6 419 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 FAM86C1Q9NVL1 165 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 CLDND1Q9NY35 253 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 ADD3Q9UEY8 706 aaKnown RBP7.23□□□□□ -1.25
HDAC1-205ENST00000472928 FAM50BQ9Y247 325 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 CHD8Q9HCK8 2581 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 ATG2AQ2TAZ0 1938 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 GPR179Q6PRD1 2367 aa7.23□□□□□ -1.25
HDAC1-205ENST00000472928 COL4A6Q14031 1691 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 TMEM221A6NGB7 291 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 hCG_1984214I3L0E3 225 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 M0R296 226 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 MBTPS2O43462 519 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 GFRA3O60609 400 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 LINC00271P0C7V0 271 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 TXNP10599 105 aaKnown RBP7.22□□□□□ -1.25
HDAC1-205ENST00000472928 CALML3P27482 149 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 SMARCA1P28370 1054 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 NLRP5P59047 1200 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 CHMP4BP1P59074 171 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 ZNF200P98182 395 aaPredicted RBP7.22□□□□□ -1.25
HDAC1-205ENST00000472928 ARHGAP1Q07960 439 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 HYAL1Q12794 435 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 NR5A1Q13285 461 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 IKBKEQ14164 716 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 CDC37Q16543 378 aaPredicted RBP7.22□□□□□ -1.25
HDAC1-205ENST00000472928 ZNF618Q5T7W0 954 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 TMCO4Q5TGY1 634 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 SYDE2Q5VT97 1194 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 TRIM67Q6ZTA4 783 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 EP400NLQ6ZTU2 488 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 FBXO11Q86XK2 927 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 NOSTRINQ8IVI9 506 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 MYOCDQ8IZQ8 938 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 ZNF713Q8N859 430 aaPredicted RBP7.22□□□□□ -1.25
HDAC1-205ENST00000472928 TMEM87AQ8NBN3 555 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 FAM200AQ8TCP9 573 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 CCDC12Q8WUD4 166 aaPredicted RBP7.22□□□□□ -1.25
HDAC1-205ENST00000472928 SPATA32Q96LK8 384 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 ZNF396Q96N95 335 aaPredicted RBP7.22□□□□□ -1.25
HDAC1-205ENST00000472928 SAMD11Q96NU1 681 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 POP1Q99575 1024 aaKnown RBP7.22□□□□□ -1.25
HDAC1-205ENST00000472928 FOXP1Q9H334 677 aaPredicted RBP7.22□□□□□ -1.25
HDAC1-205ENST00000472928 RIOX1Q9H6W3 641 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 SH3GLB2Q9NR46 395 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 DNAAF2Q9NVR5 837 aaKnown RBP7.22□□□□□ -1.25
HDAC1-205ENST00000472928 BARHL2Q9NY43 387 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 HDAC6Q9UBN7 1215 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 GTF2IRD1Q9UHL9 959 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 CDV3Q9UKY7 258 aaKnown RBP7.22□□□□□ -1.25
HDAC1-205ENST00000472928 WDR81Q562E7 1941 aa7.22□□□□□ -1.25
HDAC1-205ENST00000472928 KMT2EQ8IZD2 1858 aa7.21□□□□□ -1.25
HDAC1-205ENST00000472928 DMXL1Q9Y485 3027 aa7.21□□□□□ -1.25
HDAC1-205ENST00000472928 PNMA6FA0A0J9YX94 578 aa7.21□□□□□ -1.26
HDAC1-205ENST00000472928 BTBD18B2RXH4 712 aa7.21□□□□□ -1.26
HDAC1-205ENST00000472928 HAS3O00219 553 aa7.21□□□□□ -1.26
HDAC1-205ENST00000472928 ZBTB5O15062 677 aa7.21□□□□□ -1.26
HDAC1-205ENST00000472928 TBX10O75333 385 aa7.21□□□□□ -1.26
HDAC1-205ENST00000472928 PRPF40AO75400 957 aaKnown RBP7.21□□□□□ -1.26
HDAC1-205ENST00000472928 AMHP03971 560 aa7.21□□□□□ -1.26
HDAC1-205ENST00000472928 U2AF2P26368 475 aaKnown RBP eCLIP7.21□□□□□ -1.26
HDAC1-205ENST00000472928 ATP1A2P50993 1020 aa7.21□□□□□ -1.26
HDAC1-205ENST00000472928 ADCY7P51828 1080 aa7.21□□□□□ -1.26
HDAC1-205ENST00000472928 VCPP55072 806 aaKnown RBP7.21□□□□□ -1.26
HDAC1-205ENST00000472928 RPS6P62753 249 aaKnown RBP7.21□□□□□ -1.26
HDAC1-205ENST00000472928 CEBPZQ03701 1054 aaKnown RBP7.21□□□□□ -1.26
HDAC1-205ENST00000472928 DPYDQ12882 1025 aa7.21□□□□□ -1.26
HDAC1-205ENST00000472928 SMAD4Q13485 552 aaKnown RBP7.21□□□□□ -1.26
HDAC1-205ENST00000472928 NPY5RQ15761 445 aa7.21□□□□□ -1.26
HDAC1-205ENST00000472928 QRICH1Q2TAL8 776 aa7.21□□□□□ -1.26
HDAC1-205ENST00000472928 OXLD1Q5BKU9 147 aa7.21□□□□□ -1.26
HDAC1-205ENST00000472928 PPP1R18Q6NYC8 613 aa7.21□□□□□ -1.26
HDAC1-205ENST00000472928 BTNL9Q6UXG8 535 aa7.21□□□□□ -1.26
HDAC1-205ENST00000472928 TMEM192Q8IY95 271 aa7.21□□□□□ -1.26
HDAC1-205ENST00000472928 DAGLBQ8NCG7 672 aa7.21□□□□□ -1.26
HDAC1-205ENST00000472928 DBF4BQ8NFT6 615 aa7.21□□□□□ -1.26
HDAC1-205ENST00000472928 LEO1Q8WVC0 666 aaPredicted RBP7.21□□□□□ -1.26
HDAC1-205ENST00000472928 USP28Q96RU2 1077 aa7.21□□□□□ -1.26
HDAC1-205ENST00000472928 PRRX2Q99811 253 aa7.21□□□□□ -1.26
HDAC1-205ENST00000472928 OSBPL7Q9BZF2 842 aa7.21□□□□□ -1.26
HDAC1-205ENST00000472928 SCAND2PQ9GZW5 306 aaPredicted RBP7.21□□□□□ -1.26
HDAC1-205ENST00000472928 JMJD4Q9H9V9 463 aa7.21□□□□□ -1.26
HDAC1-205ENST00000472928 LMBRD1Q9NUN5 540 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms