RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 EP400NLQ6ZTU2 488 aa17.2■□□□□ 0.34
VTI1A-203ENST00000472892 NEK8Q86SG6 692 aa17.2■□□□□ 0.34
VTI1A-203ENST00000472892 POF1BQ8WVV4 589 aa17.2■□□□□ 0.34
VTI1A-203ENST00000472892 FAM20AQ96MK3 541 aa17.2■□□□□ 0.34
VTI1A-203ENST00000472892 GJB4Q9NTQ9 266 aa17.2■□□□□ 0.34
VTI1A-203ENST00000472892 TYW1Q9NV66 732 aaKnown RBP17.2■□□□□ 0.34
VTI1A-203ENST00000472892 PCDHB12Q9Y5F1 795 aa17.2■□□□□ 0.34
VTI1A-203ENST00000472892 MYO7AQ13402 2215 aa17.2■□□□□ 0.34
VTI1A-203ENST00000472892 TMEM150BA6NC51 233 aa17.19■□□□□ 0.34
VTI1A-203ENST00000472892 EML1O00423 815 aa17.19■□□□□ 0.34
VTI1A-203ENST00000472892 FDPSP14324 419 aaKnown RBP17.19■□□□□ 0.34
VTI1A-203ENST00000472892 GCFC2P16383 781 aaKnown RBP17.19■□□□□ 0.34
VTI1A-203ENST00000472892 ZSCAN20P17040 1043 aaPredicted RBP17.19■□□□□ 0.34
VTI1A-203ENST00000472892 COL9A1P20849 921 aa17.19■□□□□ 0.34
VTI1A-203ENST00000472892 GTF2F1P35269 517 aaKnown RBP eCLIP17.19■□□□□ 0.34
VTI1A-203ENST00000472892 PSMC5P62195 406 aa17.19■□□□□ 0.34
VTI1A-203ENST00000472892 DLX2Q07687 328 aaPredicted RBP17.19■□□□□ 0.34
VTI1A-203ENST00000472892 PPP2R5CQ13362 524 aa17.19■□□□□ 0.34
VTI1A-203ENST00000472892 ADAM15Q13444 863 aa17.19■□□□□ 0.34
VTI1A-203ENST00000472892 DRP2Q13474 957 aa17.19■□□□□ 0.34
VTI1A-203ENST00000472892 MTERF2Q49AM1 385 aa17.19■□□□□ 0.34
VTI1A-203ENST00000472892 GJD3Q8N144 294 aa17.19■□□□□ 0.34
VTI1A-203ENST00000472892 OXER1Q8TDS5 423 aa17.19■□□□□ 0.34
VTI1A-203ENST00000472892 KHSRPQ92945 711 aaKnown RBP eCLIP17.19■□□□□ 0.34
VTI1A-203ENST00000472892 ZNF668Q96K58 619 aaPredicted RBP17.19■□□□□ 0.34
VTI1A-203ENST00000472892 AAASQ9NRG9 546 aa17.19■□□□□ 0.34
VTI1A-203ENST00000472892 ORC3Q9UBD5 711 aaPredicted RBP17.19■□□□□ 0.34
VTI1A-203ENST00000472892 SEPT9Q9UHD8 586 aaPredicted RBP17.19■□□□□ 0.34
VTI1A-203ENST00000472892 VAV3Q9UKW4 847 aa17.19■□□□□ 0.34
VTI1A-203ENST00000472892 WDR81Q562E7 1941 aa17.19■□□□□ 0.34
VTI1A-203ENST00000472892 DDX11L8A8MPP1 907 aa17.18■□□□□ 0.34
VTI1A-203ENST00000472892 PI4K2BG5E9Z4 385 aa17.18■□□□□ 0.34
VTI1A-203ENST00000472892 TBX3O15119 743 aa17.18■□□□□ 0.34
VTI1A-203ENST00000472892 DTNBO60941 627 aa17.18■□□□□ 0.34
VTI1A-203ENST00000472892 MAFO75444 373 aaPredicted RBP17.18■□□□□ 0.34
VTI1A-203ENST00000472892 FGFR1P11362 822 aa17.18■□□□□ 0.34
VTI1A-203ENST00000472892 IRS1P35568 1242 aa17.18■□□□□ 0.34
VTI1A-203ENST00000472892 DNM2P50570 870 aa17.18■□□□□ 0.34
VTI1A-203ENST00000472892 UBE3AQ05086 875 aa17.18■□□□□ 0.34
VTI1A-203ENST00000472892 ME3Q16798 604 aa17.18■□□□□ 0.34
VTI1A-203ENST00000472892 PIK3AP1Q6ZUJ8 805 aa17.18■□□□□ 0.34
VTI1A-203ENST00000472892 ANO5Q75V66 913 aa17.18■□□□□ 0.34
VTI1A-203ENST00000472892 WASF1Q92558 559 aa17.18■□□□□ 0.34
VTI1A-203ENST00000472892 CASD1Q96PB1 797 aa17.18■□□□□ 0.34
VTI1A-203ENST00000472892 NAP1L4Q99733 375 aaKnown RBP17.18■□□□□ 0.34
VTI1A-203ENST00000472892 TMEM117Q9H0C3 514 aa17.18■□□□□ 0.34
VTI1A-203ENST00000472892 IGFLR1Q9H665 355 aa17.18■□□□□ 0.34
VTI1A-203ENST00000472892 CWH43Q9H720 699 aa17.18■□□□□ 0.34
VTI1A-203ENST00000472892 RNF19AQ9NV58 838 aa17.18■□□□□ 0.34
VTI1A-203ENST00000472892 FAM50BQ9Y247 325 aa17.18■□□□□ 0.34
VTI1A-203ENST00000472892 A0A0U1RQF3 1178 aa17.17■□□□□ 0.34
VTI1A-203ENST00000472892 HOXA2O43364 376 aa17.17■□□□□ 0.34
VTI1A-203ENST00000472892 CCNT1O60563 726 aaKnown RBP17.17■□□□□ 0.34
VTI1A-203ENST00000472892 QARSP47897 775 aaKnown RBP17.17■□□□□ 0.34
VTI1A-203ENST00000472892 CSPP1Q1MSJ5 1256 aa17.17■□□□□ 0.34
VTI1A-203ENST00000472892 EARS2Q5JPH6 523 aaKnown RBP17.17■□□□□ 0.34
VTI1A-203ENST00000472892 SPOUT1Q5T280 376 aaKnown RBP17.17■□□□□ 0.34
VTI1A-203ENST00000472892 LRRC55Q6ZSA7 311 aa17.17■□□□□ 0.34
VTI1A-203ENST00000472892 ADGRD2Q7Z7M1 963 aa17.17■□□□□ 0.34
VTI1A-203ENST00000472892 ECHDC2Q86YB7 292 aa17.17■□□□□ 0.34
VTI1A-203ENST00000472892 NECAB1Q8N987 351 aa17.17■□□□□ 0.34
VTI1A-203ENST00000472892 NLRP7Q8WX94 980 aa17.17■□□□□ 0.34
VTI1A-203ENST00000472892 HAS1Q92839 578 aa17.17■□□□□ 0.34
VTI1A-203ENST00000472892 PPP2R3CQ969Q6 453 aa17.17■□□□□ 0.34
VTI1A-203ENST00000472892 SH2D3AQ9BRG2 576 aa17.17■□□□□ 0.34
VTI1A-203ENST00000472892 GCOM2Q9BZD3 368 aaPredicted RBP17.17■□□□□ 0.34
VTI1A-203ENST00000472892 PRKAG3Q9UGI9 489 aa17.17■□□□□ 0.34
VTI1A-203ENST00000472892 ATG2AQ2TAZ0 1938 aa17.17■□□□□ 0.34
VTI1A-203ENST00000472892 LINC01565O15544 149 aa17.16■□□□□ 0.34
VTI1A-203ENST00000472892 EIF5BO60841 1220 aaKnown RBP17.16■□□□□ 0.34
VTI1A-203ENST00000472892 FGF18O76093 207 aa17.16■□□□□ 0.34
VTI1A-203ENST00000472892 CSPG5O95196 566 aa17.16■□□□□ 0.34
VTI1A-203ENST00000472892 EOMESO95936 686 aa17.16■□□□□ 0.34
VTI1A-203ENST00000472892 P4HBP07237 508 aaKnown RBP17.16■□□□□ 0.34
VTI1A-203ENST00000472892 ZNF598Q86UK7 904 aaKnown RBP17.16■□□□□ 0.34
VTI1A-203ENST00000472892 EFHBQ8N7U6 833 aa17.16■□□□□ 0.34
VTI1A-203ENST00000472892 COLGALT1Q8NBJ5 622 aa17.16■□□□□ 0.34
VTI1A-203ENST00000472892 TNFRSF25Q93038 417 aa17.16■□□□□ 0.34
VTI1A-203ENST00000472892 GTF3C6Q969F1 213 aa17.16■□□□□ 0.34
VTI1A-203ENST00000472892 SCLT1Q96NL6 688 aa17.16■□□□□ 0.34
VTI1A-203ENST00000472892 CYP26B1Q9NR63 512 aa17.16■□□□□ 0.34
VTI1A-203ENST00000472892 CHST12Q9NRB3 414 aa17.16■□□□□ 0.34
VTI1A-203ENST00000472892 SUCLA2Q9P2R7 463 aaPredicted RBP17.16■□□□□ 0.34
VTI1A-203ENST00000472892 HCSTQ9UBK5 93 aa17.16■□□□□ 0.34
VTI1A-203ENST00000472892 KIAA1671Q9BY89 1806 aa17.16■□□□□ 0.34
VTI1A-203ENST00000472892 FNDC1Q4ZHG4 1894 aaPredicted RBP17.16■□□□□ 0.34
VTI1A-203ENST00000472892 C19orf67A6NJJ6 358 aa17.15■□□□□ 0.34
VTI1A-203ENST00000472892 DKC1O60832 514 aaKnown RBP eCLIP17.15■□□□□ 0.34
VTI1A-203ENST00000472892 TBX10O75333 385 aa17.15■□□□□ 0.34
VTI1A-203ENST00000472892 CSDE1O75534 798 aaKnown RBP17.15■□□□□ 0.34
VTI1A-203ENST00000472892 LAG3P18627 525 aa17.15■□□□□ 0.34
VTI1A-203ENST00000472892 FGFR4P22455 802 aa17.15■□□□□ 0.34
VTI1A-203ENST00000472892 PLCB3Q01970 1234 aa17.15■□□□□ 0.34
VTI1A-203ENST00000472892 EPHA7Q15375 998 aa17.15■□□□□ 0.34
VTI1A-203ENST00000472892 SMAD2Q15796 467 aaKnown RBP17.15■□□□□ 0.34
VTI1A-203ENST00000472892 ZNF410Q86VK4 478 aa17.15■□□□□ 0.34
VTI1A-203ENST00000472892 JPH2Q9BR39 696 aaPredicted RBP17.15■□□□□ 0.34
VTI1A-203ENST00000472892 TRAIPQ9BWF2 469 aa17.15■□□□□ 0.34
VTI1A-203ENST00000472892 DACT1Q9NYF0 836 aa17.15■□□□□ 0.34
VTI1A-203ENST00000472892 CLEC1BQ9P126 229 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms