RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 ADCY10Q96PN6 1610 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 LGALS16A8MUM7 142 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 H3BML4 177 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 TCERG1O14776 1098 aaKnown RBP3.19□□□□□ -1.9
XRN1-210ENST00000472697 WNT9AO14904 365 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 ARHGAP6O43182 974 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 AHCYL1O43865 530 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 LRIG2O94898 1065 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 TBX18O95935 607 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 MMEP08473 750 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 VSIG8P0DPA2 414 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 VAV1P15498 845 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 MC4RP32245 332 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 RGS3P49796 1198 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 NR1H2P55055 460 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 ICE2Q659A1 982 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 TLDC1Q6P9B6 456 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 KIF18BQ86Y91 864 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 MYLK4Q86YV6 388 aaPredicted RBP3.19□□□□□ -1.9
XRN1-210ENST00000472697 TOP6BLQ8N6T0 577 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 ZNF610Q8N9Z0 462 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 SIMC1Q8NDZ2 872 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 ACDQ96AP0 544 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 FBXL18Q96ME1 805 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 CDADC1Q9BWV3 514 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 SEMA6BQ9H3T3 888 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 PCIF1Q9H4Z3 704 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 C1GALT1Q9NS00 363 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 PLB1Q6P1J6 1458 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 IGF1RP08069 1367 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 GRIN2AQ12879 1464 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 SYNDIG1LA6NDD5 238 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 H7C1D1 291 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 FIBPO43427 364 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 GJB3O75712 270 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 NAT2P11245 290 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 PHKA1P46020 1223 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 ARL4DP49703 201 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 AGFG1P52594 562 aaKnown RBP3.19□□□□□ -1.9
XRN1-210ENST00000472697 DSC2Q02487 901 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 TEKQ02763 1124 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 ZNF543Q08ER8 600 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.19□□□□□ -1.9
XRN1-210ENST00000472697 CLEC16AQ2KHT3 1053 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 KIZQ2M2Z5 673 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 ANO6Q4KMQ2 910 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 CDKAL1Q5VV42 579 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 FAM117BQ6P1L5 589 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 MZT2AQ6P582 158 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 PDZD4Q76G19 769 aaPredicted RBP3.19□□□□□ -1.9
XRN1-210ENST00000472697 GET4Q7L5D6 327 aaPredicted RBP3.19□□□□□ -1.9
XRN1-210ENST00000472697 GALNT6Q8NCL4 622 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 NRG4Q8WWG1 115 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 FAM193BQ96PV7 902 aaPredicted RBP3.19□□□□□ -1.9
XRN1-210ENST00000472697 UBL7Q96S82 380 aaPredicted RBP3.19□□□□□ -1.9
XRN1-210ENST00000472697 SERINC2Q96SA4 455 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 DUSP23Q9BVJ7 150 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 ALDH8A1Q9H2A2 487 aaPredicted RBP3.19□□□□□ -1.9
XRN1-210ENST00000472697 FAM204AQ9H8W3 233 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 LRFN1Q9P244 771 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 CPA4Q9UI42 421 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 PCDHA6Q9UN73 950 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 MAGED2Q9UNF1 606 aaPredicted RBP3.19□□□□□ -1.9
XRN1-210ENST00000472697 RABGAP1Q9Y3P9 1069 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 CFAP43Q8NDM7 1665 aa3.19□□□□□ -1.9
XRN1-210ENST00000472697 SYN1P17600 705 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 SETQ01105 290 aaPredicted RBP3.18□□□□□ -1.9
XRN1-210ENST00000472697 NUCB1Q02818 461 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 PPP3CAQ08209 521 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 MYBPC3Q14896 1274 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 SEPT2Q15019 361 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 LMBRD2Q68DH5 695 aaPredicted RBP3.18□□□□□ -1.9
XRN1-210ENST00000472697 C16orf59Q7L2K0 433 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 CPOQ8IVL8 374 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 GOLGA6L1Q8N7Z2 621 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 ZNF527Q8NB42 609 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 RNF141Q8WVD5 230 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 LRTOMTQ8WZ04 291 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 TRIM11Q96F44 468 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 C16orf92Q96LL3 132 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 DMRTA2Q96SC8 542 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 KRTAP4-7Q9BYR0 210 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 ADAM7Q9H2U9 754 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 ACSS3Q9H6R3 686 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 CNTD2Q9H8S5 307 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 OBP2BQ9NPH6 170 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 AJAP1Q9UKB5 411 aaPredicted RBP3.18□□□□□ -1.9
XRN1-210ENST00000472697 LRRFIP2Q9Y608 721 aaKnown RBP3.18□□□□□ -1.9
XRN1-210ENST00000472697 HIP1RO75146 1068 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 PCDH8O95206 1070 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 ZNF865P0CJ78 1059 aaPredicted RBP3.18□□□□□ -1.9
XRN1-210ENST00000472697 GNAT1P11488 350 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 MAN1A1P33908 653 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 ADMP35318 185 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 LIFRP42702 1097 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 POU4F1Q01851 419 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 GRIN1Q05586 938 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 DUSP4Q13115 394 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 PFKFB4Q16877 469 aa3.18□□□□□ -1.9
XRN1-210ENST00000472697 SLC35G1Q2M3R5 365 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms