RNA–Protein interactions for RNA: ENST00000472246.5

NUDCD3-205, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-205ENST00000472246 UBE3AQ05086 875 aa11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 SSRP1Q08945 709 aaKnown RBP11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 TBC1D8BQ0IIM8 1120 aa11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 STK3Q13188 491 aa11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 NPY5RQ15761 445 aa11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 CSPP1Q1MSJ5 1256 aa11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 PLPP4Q5VZY2 271 aa11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 LRRC55Q6ZSA7 311 aa11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 MIER3Q7Z3K6 550 aa11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 RNF169Q8NCN4 708 aa11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 SCLT1Q96NL6 688 aa11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 CASD1Q96PB1 797 aa11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 POP1Q99575 1024 aaKnown RBP11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 RIT2Q99578 217 aa11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 TMEM117Q9H0C3 514 aa11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 TLE6Q9H808 572 aa11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 SH3GLB2Q9NR46 395 aa11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 NRBP2Q9NSY0 501 aa11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 RNF216Q9NWF9 866 aaPredicted RBP11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 SEPT9Q9UHD8 586 aaPredicted RBP11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 PCDHA4Q9UN74 947 aa11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 ARIH1Q9Y4X5 557 aaPredicted RBP11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 MUC6Q6W4X9 2439 aa11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 M0R2N6 131 aa11.08□□□□□ -0.64
NUDCD3-205ENST00000472246 FSCN2O14926 492 aa11.08□□□□□ -0.64
NUDCD3-205ENST00000472246 DTNBO60941 627 aa11.08□□□□□ -0.64
NUDCD3-205ENST00000472246 DEXIO95424 95 aa11.08□□□□□ -0.64
NUDCD3-205ENST00000472246 DARSP14868 501 aaKnown RBP11.08□□□□□ -0.64
NUDCD3-205ENST00000472246 ZSCAN20P17040 1043 aaPredicted RBP11.08□□□□□ -0.64
NUDCD3-205ENST00000472246 LAG3P18627 525 aa11.08□□□□□ -0.64
NUDCD3-205ENST00000472246 HOXD11P31277 338 aaPredicted RBP11.08□□□□□ -0.64
NUDCD3-205ENST00000472246 SFNP31947 248 aa11.08□□□□□ -0.64
NUDCD3-205ENST00000472246 COASYQ13057 564 aa11.08□□□□□ -0.64
NUDCD3-205ENST00000472246 DUSP6Q16828 381 aa11.08□□□□□ -0.64
NUDCD3-205ENST00000472246 MTERF2Q49AM1 385 aa11.08□□□□□ -0.64
NUDCD3-205ENST00000472246 Q4G0T1 1027 aa11.08□□□□□ -0.64
NUDCD3-205ENST00000472246 CLLU1OSQ5K130 101 aa11.08□□□□□ -0.64
NUDCD3-205ENST00000472246 B3GNT9Q6UX72 402 aa11.08□□□□□ -0.64
NUDCD3-205ENST00000472246 FAM43BQ6ZT52 329 aaPredicted RBP11.08□□□□□ -0.64
NUDCD3-205ENST00000472246 ECHDC2Q86YB7 292 aa11.08□□□□□ -0.64
NUDCD3-205ENST00000472246 RNF135Q8IUD6 432 aa11.08□□□□□ -0.64
NUDCD3-205ENST00000472246 TRIM22Q8IYM9 498 aa11.08□□□□□ -0.64
NUDCD3-205ENST00000472246 BLIDQ8IZY5 108 aa11.08□□□□□ -0.64
NUDCD3-205ENST00000472246 NLRP7Q8WX94 980 aa11.08□□□□□ -0.64
NUDCD3-205ENST00000472246 USP15Q9Y4E8 981 aaPredicted RBP11.08□□□□□ -0.64
NUDCD3-205ENST00000472246 CYP46A1Q9Y6A2 500 aa11.08□□□□□ -0.64
NUDCD3-205ENST00000472246 TRIOO75962 3097 aa11.08□□□□□ -0.64
NUDCD3-205ENST00000472246 CYP3A7-CYP3A51PA0A087WV96 503 aa11.07□□□□□ -0.64
NUDCD3-205ENST00000472246 CPLX1O14810 134 aa11.07□□□□□ -0.64
NUDCD3-205ENST00000472246 STBD1O95210 358 aa11.07□□□□□ -0.64
NUDCD3-205ENST00000472246 ATF7P17544 494 aaPredicted RBP11.07□□□□□ -0.64
NUDCD3-205ENST00000472246 CYP3A7P24462 503 aa11.07□□□□□ -0.64
NUDCD3-205ENST00000472246 TARBP2Q15633 366 aaKnown RBP11.07□□□□□ -0.64
NUDCD3-205ENST00000472246 HERC4Q5GLZ8 1057 aaPredicted RBP11.07□□□□□ -0.64
NUDCD3-205ENST00000472246 KCNT2Q6UVM3 1135 aa11.07□□□□□ -0.64
NUDCD3-205ENST00000472246 HFE2Q6ZVN8 426 aa11.07□□□□□ -0.64
NUDCD3-205ENST00000472246 ABI1Q8IZP0 508 aa11.07□□□□□ -0.64
NUDCD3-205ENST00000472246 LRRC43Q8N309 656 aa11.07□□□□□ -0.64
NUDCD3-205ENST00000472246 DAGLBQ8NCG7 672 aa11.07□□□□□ -0.64
NUDCD3-205ENST00000472246 ETNPPLQ8TBG4 499 aa11.07□□□□□ -0.64
NUDCD3-205ENST00000472246 HELQQ8TDG4 1101 aa11.07□□□□□ -0.64
NUDCD3-205ENST00000472246 MRPS27Q92552 414 aaKnown RBP11.07□□□□□ -0.64
NUDCD3-205ENST00000472246 ZNF274Q96GC6 653 aaPredicted RBP11.07□□□□□ -0.64
NUDCD3-205ENST00000472246 CEP89Q96ST8 783 aa11.07□□□□□ -0.64
NUDCD3-205ENST00000472246 TCF25Q9BQ70 676 aa11.07□□□□□ -0.64
NUDCD3-205ENST00000472246 C22orf23Q9BZE7 217 aa11.07□□□□□ -0.64
NUDCD3-205ENST00000472246 ENTPD7Q9NQZ7 604 aa11.07□□□□□ -0.64
NUDCD3-205ENST00000472246 KCNJ14Q9UNX9 436 aa11.07□□□□□ -0.64
NUDCD3-205ENST00000472246 WDFY4Q6ZS81 3184 aa11.07□□□□□ -0.64
NUDCD3-205ENST00000472246 TECTAO75443 2155 aa11.06□□□□□ -0.64
NUDCD3-205ENST00000472246 A0A087WZ62 844 aa11.06□□□□□ -0.64
NUDCD3-205ENST00000472246 HIDE1A8MVS5 230 aa11.06□□□□□ -0.64
NUDCD3-205ENST00000472246 HOXA2O43364 376 aa11.06□□□□□ -0.64
NUDCD3-205ENST00000472246 SLC37A4O43826 429 aa11.06□□□□□ -0.64
NUDCD3-205ENST00000472246 PLCB3Q01970 1234 aa11.06□□□□□ -0.64
NUDCD3-205ENST00000472246 INF2Q27J81 1249 aa11.06□□□□□ -0.64
NUDCD3-205ENST00000472246 XKR3Q5GH77 459 aa11.06□□□□□ -0.64
NUDCD3-205ENST00000472246 PLA2G4FQ68DD2 849 aa11.06□□□□□ -0.64
NUDCD3-205ENST00000472246 LLGL2Q6P1M3 1020 aa11.06□□□□□ -0.64
NUDCD3-205ENST00000472246 ZNF598Q86UK7 904 aaKnown RBP11.06□□□□□ -0.64
NUDCD3-205ENST00000472246 RDM1Q8NG50 284 aa11.06□□□□□ -0.64
NUDCD3-205ENST00000472246 RPGRIP1Q96KN7 1286 aa11.06□□□□□ -0.64
NUDCD3-205ENST00000472246 MBOAT7Q96N66 472 aa11.06□□□□□ -0.64
NUDCD3-205ENST00000472246 ZNF558Q96NG5 402 aa11.06□□□□□ -0.64
NUDCD3-205ENST00000472246 FDXACB1Q9BRP7 624 aaPredicted RBP11.06□□□□□ -0.64
NUDCD3-205ENST00000472246 APOL5Q9BWW9 433 aa11.06□□□□□ -0.64
NUDCD3-205ENST00000472246 GJB4Q9NTQ9 266 aa11.06□□□□□ -0.64
NUDCD3-205ENST00000472246 DDX25Q9UHL0 483 aaKnown RBP11.06□□□□□ -0.64
NUDCD3-205ENST00000472246 LZTS1Q9Y250 596 aa11.06□□□□□ -0.64
NUDCD3-205ENST00000472246 ZNF318Q5VUA4 2279 aa11.06□□□□□ -0.64
NUDCD3-205ENST00000472246 IGKV6-21A0A0C4DH24 114 aa11.05□□□□□ -0.64
NUDCD3-205ENST00000472246 A0A0U1RQF3 1178 aa11.05□□□□□ -0.64
NUDCD3-205ENST00000472246 LOC730098B7Z3J9 87 aa11.05□□□□□ -0.64
NUDCD3-205ENST00000472246 NT5C1B-RDH14C9J2C7 533 aa11.05□□□□□ -0.64
NUDCD3-205ENST00000472246 EML1O00423 815 aa11.05□□□□□ -0.64
NUDCD3-205ENST00000472246 EPB41L2O43491 1005 aaKnown RBP11.05□□□□□ -0.64
NUDCD3-205ENST00000472246 TECP42680 631 aa11.05□□□□□ -0.64
NUDCD3-205ENST00000472246 SCRN1Q12765 414 aa11.05□□□□□ -0.64
NUDCD3-205ENST00000472246 KCNC3Q14003 757 aa11.05□□□□□ -0.64
NUDCD3-205ENST00000472246 NONOQ15233 471 aaKnown RBP eCLIP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms