RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 GRIN1Q05586 938 aa16.81■□□□□ 0.28
SNX13-205ENST00000471744 MKRN4PQ13434 485 aaPredicted RBP16.81■□□□□ 0.28
SNX13-205ENST00000471744 IKBKEQ14164 716 aa16.81■□□□□ 0.28
SNX13-205ENST00000471744 MXD4Q14582 209 aaPredicted RBP16.81■□□□□ 0.28
SNX13-205ENST00000471744 LPIN1Q14693 890 aa16.81■□□□□ 0.28
SNX13-205ENST00000471744 ZRSR1Q15695 479 aaKnown RBP16.81■□□□□ 0.28
SNX13-205ENST00000471744 FOXD4L6Q3SYB3 417 aaPredicted RBP16.81■□□□□ 0.28
SNX13-205ENST00000471744 TMEM119Q4V9L6 283 aa16.81■□□□□ 0.28
SNX13-205ENST00000471744 C9orf50Q5SZB4 431 aa16.81■□□□□ 0.28
SNX13-205ENST00000471744 FOXD4L3Q6VB84 417 aaPredicted RBP16.81■□□□□ 0.28
SNX13-205ENST00000471744 VWCEQ96DN2 955 aa16.81■□□□□ 0.28
SNX13-205ENST00000471744 SCLT1Q96NL6 688 aa16.81■□□□□ 0.28
SNX13-205ENST00000471744 IFIH1Q9BYX4 1025 aaKnown RBP16.81■□□□□ 0.28
SNX13-205ENST00000471744 BHMT2Q9H2M3 363 aa16.81■□□□□ 0.28
SNX13-205ENST00000471744 CCDC39Q9UFE4 941 aa16.81■□□□□ 0.28
SNX13-205ENST00000471744 GINS2Q9Y248 185 aa16.81■□□□□ 0.28
SNX13-205ENST00000471744 USO1O60763 962 aaKnown RBP16.8■□□□□ 0.28
SNX13-205ENST00000471744 CUTAO60888 179 aa16.8■□□□□ 0.28
SNX13-205ENST00000471744 CYP11B2P19099 503 aa16.8■□□□□ 0.28
SNX13-205ENST00000471744 GPC3P51654 580 aa16.8■□□□□ 0.28
SNX13-205ENST00000471744 GRB10Q13322 594 aa16.8■□□□□ 0.28
SNX13-205ENST00000471744 KIZQ2M2Z5 673 aa16.8■□□□□ 0.28
SNX13-205ENST00000471744 RASIP1Q5U651 963 aa16.8■□□□□ 0.28
SNX13-205ENST00000471744 PADI6Q6TGC4 694 aa16.8■□□□□ 0.28
SNX13-205ENST00000471744 OTOP2Q7RTS6 562 aa16.8■□□□□ 0.28
SNX13-205ENST00000471744 RHPN2Q8IUC4 686 aa16.8■□□□□ 0.28
SNX13-205ENST00000471744 DBF4BQ8NFT6 615 aa16.8■□□□□ 0.28
SNX13-205ENST00000471744 NLRP7Q8WX94 980 aa16.8■□□□□ 0.28
SNX13-205ENST00000471744 PNMA5Q96PV4 448 aa16.8■□□□□ 0.28
SNX13-205ENST00000471744 FTHL17Q9BXU8 183 aa16.8■□□□□ 0.28
SNX13-205ENST00000471744 GCOM2Q9BZD3 368 aaPredicted RBP16.8■□□□□ 0.28
SNX13-205ENST00000471744 INO80BQ9C086 356 aaPredicted RBP16.8■□□□□ 0.28
SNX13-205ENST00000471744 ADAMTS10Q9H324 1103 aa16.8■□□□□ 0.28
SNX13-205ENST00000471744 XPNPEP1Q9NQW7 623 aa16.8■□□□□ 0.28
SNX13-205ENST00000471744 COL4A3BPQ9Y5P4 624 aa16.8■□□□□ 0.28
SNX13-205ENST00000471744 ZBBXA8MT70 800 aa16.79■□□□□ 0.28
SNX13-205ENST00000471744 GPR182O15218 404 aa16.79■□□□□ 0.28
SNX13-205ENST00000471744 RPS6KA5O75582 802 aa16.79■□□□□ 0.28
SNX13-205ENST00000471744 NCLP19338 710 aaKnown RBP16.79■□□□□ 0.28
SNX13-205ENST00000471744 EIF4BP23588 611 aaKnown RBP16.79■□□□□ 0.28
SNX13-205ENST00000471744 KCNJ6P48051 423 aa16.79■□□□□ 0.28
SNX13-205ENST00000471744 PAK2Q13177 524 aa16.79■□□□□ 0.28
SNX13-205ENST00000471744 DRP2Q13474 957 aa16.79■□□□□ 0.28
SNX13-205ENST00000471744 TFDP1Q14186 410 aa16.79■□□□□ 0.28
SNX13-205ENST00000471744 LRIT3Q3SXY7 679 aa16.79■□□□□ 0.28
SNX13-205ENST00000471744 SYMPKQ92797 1274 aaKnown RBP16.79■□□□□ 0.28
SNX13-205ENST00000471744 TMEM143Q96AN5 459 aa16.79■□□□□ 0.28
SNX13-205ENST00000471744 CLIC6Q96NY7 704 aa16.79■□□□□ 0.28
SNX13-205ENST00000471744 OSMRQ99650 979 aa16.79■□□□□ 0.28
SNX13-205ENST00000471744 TIPINQ9BVW5 301 aa16.79■□□□□ 0.28
SNX13-205ENST00000471744 SCAND2PQ9GZW5 306 aaPredicted RBP16.79■□□□□ 0.28
SNX13-205ENST00000471744 KCND2Q9NZV8 630 aa16.79■□□□□ 0.28
SNX13-205ENST00000471744 RCOR1Q9UKL0 485 aa16.79■□□□□ 0.28
SNX13-205ENST00000471744 SLC4A7Q9Y6M7 1214 aa16.79■□□□□ 0.28
SNX13-205ENST00000471744 A0A087WWV3 80 aa16.78■□□□□ 0.28
SNX13-205ENST00000471744 E9PMD0 336 aa16.78■□□□□ 0.28
SNX13-205ENST00000471744 DARSP14868 501 aaKnown RBP16.78■□□□□ 0.28
SNX13-205ENST00000471744 ME1P48163 572 aa16.78■□□□□ 0.28
SNX13-205ENST00000471744 POU5F1BQ06416 359 aa16.78■□□□□ 0.28
SNX13-205ENST00000471744 LAMTOR4Q0VGL1 99 aa16.78■□□□□ 0.28
SNX13-205ENST00000471744 PHOSPHO2Q8TCD6 241 aa16.78■□□□□ 0.28
SNX13-205ENST00000471744 PRPF31Q8WWY3 499 aaKnown RBP16.78■□□□□ 0.28
SNX13-205ENST00000471744 KIFAP3Q92845 792 aa16.78■□□□□ 0.28
SNX13-205ENST00000471744 EPSTI1Q96J88 318 aa16.78■□□□□ 0.28
SNX13-205ENST00000471744 SPATA32Q96LK8 384 aa16.78■□□□□ 0.28
SNX13-205ENST00000471744 PPP1R16BQ96T49 567 aa16.78■□□□□ 0.28
SNX13-205ENST00000471744 SLC9A7Q96T83 725 aa16.78■□□□□ 0.28
SNX13-205ENST00000471744 BMP2KQ9NSY1 1161 aaPredicted RBP16.78■□□□□ 0.28
SNX13-205ENST00000471744 STK17AQ9UEE5 414 aa16.78■□□□□ 0.28
SNX13-205ENST00000471744 TTC3P53804 2025 aa16.77■□□□□ 0.28
SNX13-205ENST00000471744 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.77■□□□□ 0.28
SNX13-205ENST00000471744 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.77■□□□□ 0.28
SNX13-205ENST00000471744 PLCG1P19174 1290 aa16.77■□□□□ 0.28
SNX13-205ENST00000471744 CD52P31358 61 aa16.77■□□□□ 0.28
SNX13-205ENST00000471744 ARL2P36404 184 aa16.77■□□□□ 0.28
SNX13-205ENST00000471744 KARSQ15046 597 aaKnown RBP16.77■□□□□ 0.28
SNX13-205ENST00000471744 PPP2R5AQ15172 486 aa16.77■□□□□ 0.28
SNX13-205ENST00000471744 PCBP1Q15365 356 aaKnown RBP eCLIP16.77■□□□□ 0.28
SNX13-205ENST00000471744 HABP4Q5JVS0 413 aaKnown RBP16.77■□□□□ 0.28
SNX13-205ENST00000471744 CCDC73Q6ZRK6 1079 aa16.77■□□□□ 0.28
SNX13-205ENST00000471744 KCNK18Q7Z418 384 aa16.77■□□□□ 0.28
SNX13-205ENST00000471744 SRGAP1Q7Z6B7 1085 aa16.77■□□□□ 0.28
SNX13-205ENST00000471744 SYT2Q8N9I0 419 aaPredicted RBP16.77■□□□□ 0.28
SNX13-205ENST00000471744 NLRP4Q96MN2 994 aa16.77■□□□□ 0.28
SNX13-205ENST00000471744 POLR3FQ9H1D9 316 aaPredicted RBP16.77■□□□□ 0.28
SNX13-205ENST00000471744 AGO3Q9H9G7 860 aaKnown RBP16.77■□□□□ 0.28
SNX13-205ENST00000471744 CDHR5Q9HBB8 845 aa16.77■□□□□ 0.28
SNX13-205ENST00000471744 PADI3Q9ULW8 664 aa16.77■□□□□ 0.28
SNX13-205ENST00000471744 NOC2LQ9Y3T9 749 aaKnown RBP16.77■□□□□ 0.28
SNX13-205ENST00000471744 A0A087WZ62 844 aa16.76■□□□□ 0.27
SNX13-205ENST00000471744 PLA2G4BP0C869 781 aa16.76■□□□□ 0.27
SNX13-205ENST00000471744 SFPQP23246 707 aaKnown RBP eCLIP16.76■□□□□ 0.27
SNX13-205ENST00000471744 PHKA2P46019 1235 aa16.76■□□□□ 0.27
SNX13-205ENST00000471744 WDR5P61964 334 aaKnown RBP16.76■□□□□ 0.27
SNX13-205ENST00000471744 NFX1Q12986 1120 aaKnown RBP16.76■□□□□ 0.27
SNX13-205ENST00000471744 SPECC1Q5M775 1068 aa16.76■□□□□ 0.27
SNX13-205ENST00000471744 FAM102BQ5T8I3 360 aa16.76■□□□□ 0.27
SNX13-205ENST00000471744 RRAGBQ5VZM2 374 aa16.76■□□□□ 0.27
SNX13-205ENST00000471744 RNF149Q8NC42 400 aa16.76■□□□□ 0.27
SNX13-205ENST00000471744 LEO1Q8WVC0 666 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 189.4 ms